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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000336_pilon:226076..228084+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045480 ID=XLOC_045480|Name=XLOC_045480|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2009bp|location=Sequence derived from alignment at sc0000336_pilon:226076..228084+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGCACCCGGCGATTTAGTTCATTTCCCACCTGCATCAATATGGCTTGA
TGGGAAAGAGCCTGCAGACTATAAAAGCTATATTTTTCGTTACGCCATCC
AGCACCTGAAGACTACAAATATAACTGTCATTAAGAAAGGtttttttGAT
GCCATCTCAGGCTATATAAGAATTCATCGTGAACTGTTTGGTGTCTATGA
TGGTGAACATCTGCCAGAGCTGGTCGAACCAAAGGTAAATACTCGTACTT
AGTTCCCTTAGATTACTCTATTTCGATTTAGCAGTTGAATGAGGTCTCTC
CTTTTGAACAACAGAATATCAAAAGGTTAATTCTTGCGTGGGCTATGAAA
TTGTTTTAGGCTTTTATCTTGAAACTGTCGGCAACTGAACTGCATATTTT
CAACACAAAGCAACAGCAACAAAAGCTCAAACaggaaatttaacttttat
tgTTGTCATTCATGTATACTATTCACTCATACAGGACAAAGAGAGAGTTg
ataaaacttttgaagaatttcttgacgatgaaaatcttcaattatTGAAA
CCACTCTTGTACGCTAGTAATTCCGTGCAAGGTTATGGACGACTTGAGGA
GATTCCAACAATGTACGGAATGACATGGAACACACCAAAAATGATGGGTG
TCCTTTTGAAAAGACTATCTGGTGACAATATTGGAGGtttgtcaaatttt
agcttttcTCTACCTTCTTTTGCCCTTCGGAAATCTTTaatgtgtccgaa
aaaaataatacaggttttataaaagtaaaattagaaaaaactggTCATCT
GAATTTAGAACAACAATTGAAATaagataaaatttctttttaaaatattt
tatcaaatcataaaatCCATATTAACTATGAggatttttctggattttta
gaaaattctgtTTCGCTTTGTTCTGGGCAAACTGTAGAAATTTTGACATC
ATGTGGTGCTCGTATCATAAGATAAAAATACCTGGTTCGGGCAGACCTTC
CATTAGGATTAAGCTTTTAACCAACTATTCTTTTTTAAGGCAAGTAGGtt
tttttAGCTAATTCTACCACACTAAGAGCAGGGCGGATTAGTAATGTTCA
ATAATTTCCTTCCTGATGAATAATTGTAGCGAAATCGTTTTGAAGCACGT
CAACAGTCAATTTCTTTGCAATActgaaatagaaataaaaatgttacAAT
ACTTTCTTTTCTTAGGATTCTACATGCTGAGAAACGGTTTCCAAAACCTC
TGGAAAAACATTATCGAGAAAGAGGGCCTTAACATCAAATACAACGTAAA
TATAATCAAAATTCGACGAAGTGAGAATGACATCTTTATTAAAAACAAGG
TTGGGAAAAAAGGACCCCGAACATGGGATCGCTATGATTTTATAATTTGG
AGTCCGGAAATGAAAACAAGTCTCCGGTACTGGGATTGCCGTAAAGATGA
AGCGTACTACTTCTCTCGTACAAGACCAACTTGGTTTACAACAGCTTTAG
TTGACACACTCGGTGCaaaaaaaGGACCATCTCCTATTGATTATTGGGTA
GATAATATCAACAAAAGACGTCAAGGTGCGATATGGGGACAACGTGATTC
ATATGCTGCTATTCGGAATTACACAGGCCCCGATTATCAATCGGGGAAAT
TTAAATCGGGTAATGATGATTCCCCGATTCGCACTACGGTCACATATCAA
ATGAATGATCGCCGACCCTCACGATTCCGATTGCGACGTAAATTGTTGAA
GGCTTTACGTGATATCGGCGCAACGAAGATCAATCTAGTGGTGATGAAGA
CTTGGAGATATTTCCCTCGGTATAACATCAAAGATTTATCAAGGGGCATC
TTATGGAGAATCTTGGAGATGCAAGGAAAATACAATATGTGGTATATCGG
ATCCTCTGTGTCTTTCGAAAGTGTCAAATCAGTCGTGGAGTATAATAAAT
TATTGGTACATAACTTTGAATTGCCAACAGAGTCGCAAAATATGAGCCCA
CCAAGCTAA Coding sequence (CDS) from alignment at sc0000336_pilon:226076..228084+ >XLOC_045480 ID=XLOC_045480|Name=XLOC_045480|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2460bp|location=Sequence derived from alignment at sc0000336_pilon:226076..228084+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGCACCCGGCGATTTAGTTCATTTCCCACCTGCATCAATATGGCTTGA
TGGGAAAGAGCCTGCAGACTATAAAAGCTATATTTTTCGTTACGCCATCC
AGCACCTGAAGACTACAAATATAACTGTCATTAAGAAAGGtttttttGAT
GCCATCTCAGGCTATATAAGAATTCATCGTGAACTGTTTGGTGTCTATGA
TGGTGAACATCTGCCAGAGCTGGTCGAACCAAAGTATGCACCCGGCGATT
TAGTTCATTTCCCACCTGCATCAATATGGCTTGATGGGAAAGAGCCTGCA
GACTATAAAAGCTATATTTTTCGTTACGCCATCCAGCACCTGAAGACTAC
AAATATAACTGTCATTAAGAAAGGtttttttGATGCCATCTCAGGCTATA
TAAGAATTCATCGTGAACTGTTTGGTGTCTATGATGGTGAACATCTGCCA
GAGCTGGTCGAACCAAAGGACAAAGAGAGAGTTgataaaacttttgaaga
atttcttgacgatgaaaatcttcaattatTGAAACCACTCTTGTACGCTA
GTAATTCCGTGCAAGGTTATGGACGACTTGAGGAGATTCCAACAATGTAC
GGAATGACATGGAACACACCAAAAATGATGGGTGTCCTTTTGAAAAGACT
ATCTGGTGACAATATTGGAGGACAAAGAGAGAGTTgataaaacttttgaa
gaatttcttgacgatgaaaatcttcaattatTGAAACCACTCTTGTACGC
TAGTAATTCCGTGCAAGGTTATGGACGACTTGAGGAGATTCCAACAATGT
ACGGAATGACATGGAACACACCAAAAATGATGGGTGTCCTTTTGAAAAGA
CTATCTGGTGACAATATTGGAGGATTCTACATGCTGAGAAACGGTTTCCA
AAACCTCTGGAAAAACATTATCGAGAAAGAGGGCCTTAACATCAAATACA
ACGTAAATATAATCAAAATTCGACGAAGTGAGAATGACATCTTTATTAAA
AACAAGGTTGGGAAAAAAGGACCCCGAACATGGGATCGCTATGATTTTAT
AATTTGGAGTCCGGAAATGAAAACAAGTCTCCGGTACTGGGATTGCCGTA
AAGATGAAGCGTACTACTTCTCTCGTACAAGACCAACTTGGTTTACAACA
GCTTTAGTTGACACACTCGGTGCaaaaaaaGGACCATCTCCTATTGATTA
TTGGGTAGATAATATCAACAAAAGACGTCAAGGTGCGATATGGGGACAAC
GTGATTCATATGCTGCTATTCGGAATTACACAGGCCCCGATTATCAATCG
GGGAAATTTAAATCGGGTAATGATGATTCCCCGATTCGCACTACGGTCAC
ATATCAAATGAATGATCGCCGACCCTCACGATTCCGATTGCGACGTAAAT
TGTTGAAGGCTTTACGTGATATCGGCGCAACGAAGATCAATCTAGTGGTG
ATGAAGACTTGGAGATATTTCCCTCGGTATAACATCAAAGATTTATCAAG
GGGCATCTTATGGAGAATCTTGGAGATGCAAGGAAAATACAATATGTGGT
ATATCGGATCCTCTGTGTCTTTCGAAAGTGTCAAATCAGTCGTGGAGTAT
AATAAATTATTGGTACATAACTTTGAATTGCCAACAGAGTCGCAAAATAT
GAGCCCACCAAGCTAAGATTCTACATGCTGAGAAACGGTTTCCAAAACCT
CTGGAAAAACATTATCGAGAAAGAGGGCCTTAACATCAAATACAACGTAA
ATATAATCAAAATTCGACGAAGTGAGAATGACATCTTTATTAAAAACAAG
GTTGGGAAAAAAGGACCCCGAACATGGGATCGCTATGATTTTATAATTTG
GAGTCCGGAAATGAAAACAAGTCTCCGGTACTGGGATTGCCGTAAAGATG
AAGCGTACTACTTCTCTCGTACAAGACCAACTTGGTTTACAACAGCTTTA
GTTGACACACTCGGTGCaaaaaaaGGACCATCTCCTATTGATTATTGGGT
AGATAATATCAACAAAAGACGTCAAGGTGCGATATGGGGACAACGTGATT
CATATGCTGCTATTCGGAATTACACAGGCCCCGATTATCAATCGGGGAAA
TTTAAATCGGGTAATGATGATTCCCCGATTCGCACTACGGTCACATATCA
AATGAATGATCGCCGACCCTCACGATTCCGATTGCGACGTAAATTGTTGA
AGGCTTTACGTGATATCGGCGCAACGAAGATCAATCTAGTGGTGATGAAG
ACTTGGAGATATTTCCCTCGGTATAACATCAAAGATTTATCAAGGGGCAT
CTTATGGAGAATCTTGGAGATGCAAGGAAAATACAATATGTGGTATATCG
GATCCTCTGTGTCTTTCGAAAGTGTCAAATCAGTCGTGGAGTATAATAAA
TTATTGGTACATAACTTTGAATTGCCAACAGAGTCGCAAAATATGAGCCC
ACCAAGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000336_pilon | genome | sc0000336_pilon:226076..228084 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 706-1497:1218 |
| Aaloc | 502-702:485 |
| Aaloc | 268-501:1 |
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