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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000371_pilon:281880..286033+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045474 ID=XLOC_045474|Name=XLOC_045474|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4154bp|location=Sequence derived from alignment at sc0000371_pilon:281880..286033+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGAAACCGTGACTATTTGAGTCGTAAACACAGAAGCAATAAACA
ACCTTCAAACTCCACTAACCATCGACATGACATTTTCGAAGAACGACAAA
ACCACCACGATCTTCAACAACTTGAAAACGAGGCTCTTCCACTTGGAGCC
GAGGCAGATGACAACGAAAGGAGACAGGCATTAGTGGATATGATATATGA
GAGACATTTGAGCAGAGAAAAGACTGGGGAGAATGACTCGACCTCTTCGG
ACGAAGAACAGATCAATGAACaaggtttgttatttttcttccCTAAAAAC
CTCTCATTTTCTCATTTCAGATTTTGAACTTCTTTTACATAAGGGAGGTT
GTTGTCCGGTCTATACGAAAAACCAATACTTGTGTTCTAGCATAATATTT
AATTggggggggTTTCAcgtttggcggaggagcggaatcggccctttttt
cggacggagtggcggaatttggcgaaaatttagacggaattacggaaatt
gggttctctgacggagacggaaaattagacaattttagtgcggaaaaaca
gaatttagcaaaaaaagttgcggaatttcggaattggtaaaagatattcc
aaatttgcggaattttcgacaaaaatattgaatttcaaaggaattttcgg
tgacggaattttggttcaatttaagacggtttgacggaaattggagaaaa
aattggcggtattgcggaatcgggtaccccctgaaacccccccccttaaT
TTGCCTGTCATTTCTTGTAATGATGCTTCAAATCTAACAAATTgaatacc
gttgaaaagataattcaagGCACTGTAATTTTTGTGGagattttttatct
ttcaatGCTTGtttttttACAGTAATTATTAAATTATTGCATGAAAGTTA
TATTTCTTAGAGCGTTGCCCGTTGgagtaaaaaacattttaaattatgtt
tttttaacTCCAATGAACTACCTTCTAGAGGATCTAagaattttaaagga
aaaataacTATATAGCTGAAATCAGCTTTCAAAGTATCTCTGTACCAAAA
ATAAAGATGctaaaaaagtttgtgtttttttcatcttcgttgtCTAAATA
TCTTTCagttatttttccaaaaaactatAGTGCtctgaatatcttttcaa
ctgTATAAAATTATATGGAACGTaaaaaaaTGTTAGAATTAAGTATTCGT
TGAAAATTGTCAATAACAAAAAATCccaaagtttgattagtttgacCGGG
TCTTGAGTATTAGAAATTGTGAAAGGGAGTTTCGAATTAATCATTTTTGG
CCGAAGTTCATCACCGTCCCCGGAGAATGTCAGTTTATGTGTTGTTCAAG
ATAAAATAACTCTCTTCCAGATTATTGTTGGTTCTGGGACGAGTCAAAAA
AgtcagatgacgtcatcgtacAAAACTGCGGAACAGAAGCTTATTTTCAT
CCGGACTACAGCTGCGGGACGGCTGCGATCCGGGGCAACCGACAATTTCG
TGAAGGCGAGGAACATTACTGGGAAGTTCAAATGTCGAGTGCCGTGTATG
GTACAGATATGGTATGAGTGGTTTTTGTTGGACCTTTTTAAAACTTCTTA
GTTGTTAAGAATGAAAACAACTTATTCTGAGTTGTTAGAAAAAGAGGTTT
CTTTCTCAGAGCAGCGTGCTGCTTAGCTAagagttttgaaattattcttC
CTTTGAATTCGAGCTTTTTTATGAATGataagtttttttgaatttctcta
tTACAAAATGATCCATTTTCTTGGTTTGAATGCGGTTTGCAATTTCAGAC
ATTTCATGCAGAGTTTCGTTTCAGTTTCTTCCAGACAATGTCCATCTCAA
CAAATAGTAAGCAAAAAACCTACGCATGCGTATTGAACTGAGCTTTTTTG
AATGCATGTTCGCATGAATTTTCACATTCTTCTTTCTATTTCACTTTTTA
CATTAGATTTAAAGAGGATAAAAAATGCATTCGGACAAAATAATAATcat
tgaaaacctttttttttcgctgaattAAATAAGCTGAAAATATTACGGAT
TTGTATATTTCAATCTGCCGATAAAATTTTCGCgtaattgtgtttttctg
gagcatcaatatagtcgtctagaatattttgtgcacaacaaacttttcat
aaaaattctcttagcccaccttagcccagtcgtttattttaaccatatcc
cgacataaagatttcccgctttcaacaaaaacgttataaacgactggatt
cccagtctaaaCAAGGCATagattcaaaagaaagaaatgcgAAATTGAAT
TtcacgaaaattaatccgattagaTACATTCCTTacaaataaatcaattt
tagaATTCtggaaagcaaaaagaaaatagattttactttccttCAACGTG
AAATTGACAATAAATTTGATCTATTGTTTGACCGACAATGACAGGCATGA
ATGAATAAGGATGTATTGATAACTTATTTGTAGTCATTCCCTTTCTTGAT
CATTCTTGCTTTTCAGATGATCGGTATCGGTGCCAGCAACGTCAACTTGG
ATCGCTACAAATCGCAATTCTGTTCGCTCATTGGAAAAGATATTGACAGT
TGGGGAATAAGTTACTTCGGAACATTACATCATAACGGCAAAACTAAAAA
CTTCTGCAAAAAATTCGAAAGAGGGGCTACTATAGGTTGTCACCTCGACC
TTTGGAAAGGCACTTTATCCTTCTATAGGAACGGAGAACCTTTAGGAATA
GCTTTTGATGGATTACTAGGTAAAGAACTTTATCCGATGATCTCCTCAAC
CGCAGCAAGAACGAAAATGAAACTTTTGTGTAGCCGAAAGACGAATTTTT
CTTTACAATATTTATGTTGCAAAGAGATCAGTAAGAATATCCCTTCATCG
AGGAACAACAACGTTTTAGAAACTCTACCTCTGCCCAATGGATTGAAAAA
ATACATCGGCTGGAGAATGGATTGGGTCTTCACATTAAACAACCCTCGAA
AACTTTCTTCCTCTGCGCCAACAAGTTCAACGAActcaaacaaaatgaaa
gaaattgccGGTCCACAAAGAAAGCGCATCCGAAGGTATTGACTTTATTT
ACATTACCATGACAACGACGACATTGCCATGACAACCGACCGACATCACC
TTGACAACCGACCGACAAAAACAATGATTGACGAACGACAAAATTTGTCC
GAAAAATTAaagagtattttttttttagaaacggagtagatttctgatga
ttttttatgtaaattgttttgtttttgtatattttttgacGAAAGAATTT
CTATTGCACTGGCTGCAGCTACACAGAGACCAAACTTGACATCCTACATG
GACGGTACTTTTATGACAAATTGGCAATGGCACCAATTCGAAAATCTCAA
TGGACTTTTTCATTAATTACATCACGagcgttttcaaaatattgctatgg
ttaTTGATTCCCAGCGGAGCAGTCCACTTTATTCaaaaagtactttaggc
gtacaaactttcgcgagatcgtaaaatcgcgaaattcacgacatttactt
tcgcgaatttcaggaaaaaatatttttcgcgagcacaaactttcgcaaat
cgttggataaaaatgagaatttttaaacgaaaatttgataaaaagtgACA
AATGCTCCTTGAATCCGATAAAACGATTATActttgactttaaaaaggcg
TCAAAGGcaataaatatgctgaaaatgtTATATTCATTACGATTTCAAAG
TTTCATAAAtttccaatttaaaaaaaaacaatttcgcATAAACTTTCGCG
CATCACCCTGTTGAGAAATttcacgagcataaactttcgcgaaaaagacc
gaaattcgcgaaaatcgcgaaagtttcttttcgcgaaagtttgtacgcct
aaagtaacaTCATCTTTTGAAAGTCTGAAAATTTGCGAATTTTAGTTAAT
GTGTGGGGCTCCGTTTATTCTAACCTGTTCTCATTTTCTAAAATCACTGA
AATGAATCCAATCCTCGAATATCATTTTCTGAATGTTGATTAACCGAACA
AGTCCTGAACGTGTGAAAAGTTTCTGTTGAActattccttttctttttcc
agCAAACACAAAGACAAAGAGACTCCACTCACCGATGAAGCAGACACCAT
ctaa Coding sequence (CDS) from alignment at sc0000371_pilon:281880..286033+ >XLOC_045474 ID=XLOC_045474|Name=XLOC_045474|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1872bp|location=Sequence derived from alignment at sc0000371_pilon:281880..286033+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGAAACCGTGACTATTTGAGTCGTAAACACAGAAGCAATAAACA
ACCTTCAAACTCCACTAACCATCGACATGACATTTTCGAAGAACGACAAA
ACCACCACGATCTTCAACAACTTGAAAACGAGGCTCTTCCACTTGGAGCC
GAGGCAGATGACAACGAAAGGAGACAGGCATTAGTGGATATGATATATGA
GAGACATTTGAGCAGAGAAAAGACTGGGGAGAATGACTCGACCTCTTCGG
ACGAAGAACAGATCAATGAACaagATGTCTCGAAACCGTGACTATTTGAG
TCGTAAACACAGAAGCAATAAACAACCTTCAAACTCCACTAACCATCGAC
ATGACATTTTCGAAGAACGACAAAACCACCACGATCTTCAACAACTTGAA
AACGAGGCTCTTCCACTTGGAGCCGAGGCAGATGACAACGAAAGGAGACA
GGCATTAGTGGATATGATATATGAGAGACATTTGAGCAGAGAAAAGACTG
GGGAGAATGACTCGACCTCTTCGGACGAAGAACAGATCAATGAACaagAT
TATTGTTGGTTCTGGGACGAGTCAAAAAAgtcagatgacgtcatcgtacA
AAACTGCGGAACAGAAGCTTATTTTCATCCGGACTACAGCTGCGGGACGG
CTGCGATCCGGGGCAACCGACAATTTCGTGAAGGCGAGGAACATTACTGG
GAAGTTCAAATGTCGAGTGCCGTGTATGGTACAGATATGATTATTGTTGG
TTCTGGGACGAGTCAAAAAAgtcagatgacgtcatcgtacAAAACTGCGG
AACAGAAGCTTATTTTCATCCGGACTACAGCTGCGGGACGGCTGCGATCC
GGGGCAACCGACAATTTCGTGAAGGCGAGGAACATTACTGGGAAGTTCAA
ATGTCGAGTGCCGTGTATGGTACAGATATGATGATCGGTATCGGTGCCAG
CAACGTCAACTTGGATCGCTACAAATCGCAATTCTGTTCGCTCATTGGAA
AAGATATTGACAGTTGGGGAATAAGTTACTTCGGAACATTACATCATAAC
GGCAAAACTAAAAACTTCTGCAAAAAATTCGAAAGAGGGGCTACTATAGG
TTGTCACCTCGACCTTTGGAAAGGCACTTTATCCTTCTATAGGAACGGAG
AACCTTTAGGAATAGCTTTTGATGGATTACTAGATGATCGGTATCGGTGC
CAGCAACGTCAACTTGGATCGCTACAAATCGCAATTCTGTTCGCTCATTG
GAAAAGATATTGACAGTTGGGGAATAAGTTACTTCGGAACATTACATCAT
AACGGCAAAACTAAAAACTTCTGCAAAAAATTCGAAAGAGGGGCTACTAT
AGGTTGTCACCTCGACCTTTGGAAAGGCACTTTATCCTTCTATAGGAACG
GAGAACCTTTAGGAATAGCTTTTGATGGATTACTAGAAACTCTACCTCTG
CCCAATGGATTGAAAAAATACATCGGCTGGAGAATGGATTGGGTCTTCAC
ATTAAACAACCCTCGAAAACTTTCTTCCTCTGCGCCAACAAGTTCAACGA
ActcaaacaaaatgaaagaaattgccGGTCCACAAAGAAAGCGCATCCGA
AGAAACTCTACCTCTGCCCAATGGATTGAAAAAATACATCGGCTGGAGAA
TGGATTGGGTCTTCACATTAAACAACCCTCGAAAACTTTCTTCCTCTGCG
CCAACAAGTTCAACGAActcaaacaaaatgaaagaaattgccGGTCCACA
AAGAAAGCGCATCCGAAGCAAACACAAAGACAAAGAGACTCCACTCACCG
ATGAAGCAGACACCATctaaCAAACACAAAGACAAAGAGACTCCACTCAC
CGATGAAGCAGACACCATctaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000371_pilon | genome | sc0000371_pilon:281880..286033 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 889-939:4104 |
| Aaloc | 808-885:3006 |
| Aaloc | 721-804:2922 |
| Aaloc | 466-717:2517 |
| Aaloc | 277-465:1373 |
| Aaloc | 1-273:1 |
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