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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000371_pilon:244962..249473+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045472 ID=XLOC_045472|Name=XLOC_045472|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4512bp|location=Sequence derived from alignment at sc0000371_pilon:244962..249473+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttgttgttgatttttgtGTTTGTCACCCTCACTTGTTCGTCACCAGT
CCTCTCAAAACCACCTTCCATCAACTCCTCCATACGAAACCTTCAAGATG
ACCACGTGGTAGTGCTTCAACAACAAAGAACTTCTTTCAAACAAGAACAG
AAATCTCATCCACCACAACAAAGTGATGAGAACACATCAAAAACCATCCA
TAAATTACGTTTGAAATTCCGCAAACTCCGTGTACGTTTGAACAACAATA
TCTGGAAAGCGTGATTTATTCCACTGCTGTGTCGCTAATTCAATTTTCTG
ATACGACTTCTGGTTGTCTTAAGTAGTGTGTTATAGAGAGAGACCTTGAA
GATACTGTGCTGGAACATTTTTTAGAGTAGAAGCTCTTAATGAAGCTTTT
GCTTTTTCAGCAAGATTTCTGGTTCTGTTCGATGAgcgttttcaaatgaa
atttttattcttgTGTTTTTAGGATCGAGTACGACAACTGGAAGAAAAGC
TGGAAAGATTGACTTTATCGCAATATAAGTCATCGTATATTCAAGGGCCA
AAGGTAGGAGTTGATTATATTCACTACAAGTTCTTGAGAGCGTGTATCAA
ACAACTTTGTGATACAAAGAGTGTGTTTCCCTGGGAAAGAAGTCTTTGTT
ACTAAAAGTACGGTGTATACTGTCGAGATCAAAGTGTGCTCGAAGATTCA
ATTACTTTGGTCTAATAATAACAAAGGTTAGAAACTTATGCACTTTGTAT
TTGGGGCAAACCTTGCTCAGctttgaaaacagaaaaaaacaagcaacgtg
attttcattttcaacttttattcatatgaaaatttatttttactaAATAA
GATAATGTTGACCTTTCTTATATTAATCATAAAAAGTGGACGACTTTTCA
TTGAAATAATTAGCACTTGAAAGCTATTAAAAGCATTATTAATGATACTT
TGGCGCCTCATCTTTGTCAAAGAAAATTAGTCCCACATCCGCAGGGGTTG
CTCATTGAACAATATCCTTAATGATGTATCCGTCACATTATTATtaccct
ttctttgttttccttttttccaggGTGAGAAAGGTGACAGAGGACCCAGg
gtaagtttgtttgttttttttctgcaaaatttaCTGCATTTTGAAGACCA
GGTATCACTTGAGGATAACAAATTTACTTGGCATTATTTCTAAGGCTTTT
CCCAAAAGGCACAAACATCTCATTAACATTCATTGACTGCTCGCTGTACT
GTGTTGAGGAGTATAAGAGATATCAAGTTTTACATCGCTTTCATTGTGGC
CCATgttaaacaaaagaaaccttAATTAATCTGAGCTGCTAGTGAAAGAA
ACATTCAGCGAAAGCATAGGATTAGTTCAGCTTGGTACCAAAAGTCTTGA
TGCAATACAAAAAACCGTTATACGTGCTTCATCTGATAAGCTTCTTAAAG
CCTTCATGTAAATCAAAAACTCCTTCAATCAAATTATAATGCCATGGTGA
CAAAAAGCATCAACATGACGTCAGATGAATGTCTCAGAGACATAACTTTT
GTGATGTCATCAACAAAAGTGTCCTTTATACCACCGCGTAGTCAATAAGC
ATCTTAATTCAATTTTTGGTACTTTCTTGAAATAGCATTGTTTACAAAAG
AGTGAATAGACAATCAATGATTTATGTTTTCTTATGACAGTAAAGCTTTT
AGCTTGCTCGTGTCAGGGCGCCGATGCAAATTGATTGATCGATCAGGTTc
aattaaaactcaaaaagatcATCCAGTAACATACCCTTTTTGTCTCGTAA
GCCGCTTTTTTGGCcaggaaatttctttcaataaacTAGACTCGCCTTTA
CCATTTGCTCAATACAAAggaagggaatttaatttccAGAATGGTCCATT
CTTACTTATCTCGCTTGAGAAATCAAATCATACAAAGCTGAACTAAacgt
ttattttatttcattcagGGACCGACAGGTGCAAGAGGATCAATGGGTTT
CCGAGGACTAACAGGACTACCAGGGCGTGATGGATCGTTCAGTCAACTAC
CGTCCTGCAccccaaaacaatatttgtcttCCAATGGAAAGAGGTTGATC
TGCTTGACTTTTGGTAAGTTAAATTTCGTTTCAATTATTATAGTCATATA
GATCCAAAATGGTTCTTCCTACAAAGATCTTAAAGTAAACAAATTTCTTA
ATCAGATTTTATAAAAGTGGCGTACCACTCACTGACTTGAAGCCACCATT
TGAAATCACTACCAGTGATACCCCTACATCTGTTAGCAAGATGCTCCATT
AAAAATATAAGTCCTTGaataaattcaaattgaaataacaATAACATGGC
CGTCTTGACGTTGACATAAGAAACACTCAAAATACAAACTAATTCTCGAT
actaatttatcattttcagaGAAAGACACATCCATCCAACCAAACAATGG
TAACGGAGGAAACAGCGGAAAAGAACGATCAACGGAACAGCCGTCGTCAG
GGAATACGGACGACAGTACCACCGAAGAGACAGTCAACCCTGATGGAGGT
GTGGACGAAGGTAATGGAATAAGGCTACCGAACCCAACTATAAACGAGGG
TAAGAACTCATCCTCAACTCTCACACAACACACTAACCCCTCTAACACTT
TAAACCTTGTCTTGTTGAGAATAATCTCTAACTAACCTTGTTCAGTATTA
ATCTATCCAAGCTATGTTTTCGCTTAAAAAACTAGATTGACGAAGCAAAT
ATTTTTGGCCACAAAATCTGCACACAGCAAGATTATTCATATTCCAAAAA
TAACCGGACATAACTCTCCTCTTTACAGGTCTGGTTGGAAAGATCGACAA
ATTCTCAGAGAAAAAtcgcatccaaaatttttatgCCGATACCTGGGATT
TACATTCATTCATTTGGGATCAAAATACATATCTGGGTGTTTCCCAACTT
AGCACCCAGTCTTTCATCTTGAAGAAATGGGTACAGAATGAGTAAGTATC
TTAGAGGTTAAAAAGAGGCGGTCTAGCGTTAAAGCTTCAATTTCCTGATG
ACAAAGAATAATTTACAATCAATTTTCATGCCATCTCTTATGTTCACGAC
TTGGAAACGTCAATATCATCTCCCGTTTTAATAGTGAATTCTGACTACTT
CCAAAGGCCATAAAACTGTATAAGGATTACTTTTTTAGAAGAAGGAGATT
ATTCACAATTTAGTAATTATTTCAACCTTTTCACACAACACAGGTTTATT
GAGAAGGCCATTCTTACGGTACCGAACGCACGAAAATGGACGTCATTCGA
ATGGCAGTCAGAGCTTTACATCGTCATCGCCTGCAACACAAAACCCGCCC
CGGGCGGTGGCGCTGCCTACTCTTATGTTTACAAAATGAAGTATGATGAA
ATCACTCTCTTCCAAAGATTGGAAACCAGGACTGCTTTTGGTGTGGATGC
CATTGAAATTGGTGAGTTGTTAACATGAGAAAATTGATATAGATATAAAA
GATACTAGACTCtttttttCTTCCATAAAGATAACTATGTTACAACGAAT
ACATTAAAACTAGATATTTGTAAGTGGAATTCCTAATCATTGAGACTAAA
AATATTATGGCGCATTTGATTTCTAATCataattttctcttttcatGAAC
AGGAAATGAGCTATACCTTGTTTTCGCGTACTTGCTTGGCGTTGGGAATG
ATGCTTATTCAGATGTATTCAAATGGTCGCAAGGAGAATTCAAGAAGGAT
CACTTGATCCCTGTGACGGGTACCGACGTTGATACTTTCAGTGTGGGTTC
AGAGCATTTTGCTGCCGTTGTGGGTGTGACGTCACGTGAcccatttgttt
atcttttgaaaTACAACGGAACGCAATTTGTGACCCATTACAACATTCCG
ATGGATTCGCGACCGTACGGCCTTACGTTCGTCCGTACCCGGAACGAATA
CTTCCTGGCGGTAGCGTTTTACGACTTGCGACAATCTCTAATCTTGAAGT
GGAATGGTGTGACTTTTCAACCGAACCAAAAGCTTGTTTCATCAAAGGTA
AAATTCATATCATCATCAGTCCTCTGACCGGCAGAGAATCAAATTACTCT
CCGAGCTATTTAATTCCACACAACGAATAAGAGAAAGATCAGCATCCTAG
GTCACAAATATTTTACTACTTGAAATAATCCTCAAAGCCATGAAATAACG
GAATAATGATGAGTAGAATCAGTGCATGATTTCCTCAACCCTTTTCTTTT
CGTTTTATAGGCGAGAGATTTCGCAACAACAACCATCAACCGAGCAGGGC
GAGAAATCACGTATCTGGCACTTGTAAACTACGAAGGGAAACCCATCATT
TATATTTATAATgaacaaacaaaacaatttggaaAACTCCAACAAACGAA
CTCTAAGTGGACAAGAGATATTGAATTTTTGCGTGTACCAAATAGTATTC
ATTTGAATTTAGCAGTAGCTTCAACTCGAGAGATTGTGATATATAAAGGA
AACACTACTTAA Coding sequence (CDS) from alignment at sc0000371_pilon:244962..249473+ >XLOC_045472 ID=XLOC_045472|Name=XLOC_045472|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3384bp|location=Sequence derived from alignment at sc0000371_pilon:244962..249473+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttgttgttgatttttgtGTTTGTCACCCTCACTTGTTCGTCACCAGT
CCTCTCAAAACCACCTTCCATCAACTCCTCCATACGAAACCTTCAAGATG
ACCACGTGGTAGTGCTTCAACAACAAAGAACTTCTTTCAAACAAGAACAG
AAATCTCATCCACCACAACAAAGTGATGAGAACACATCAAAAACCATCCA
TAAATTACGTTTGAAATTCCGCAAACTCCGTatgttgttgttgatttttg
tGTTTGTCACCCTCACTTGTTCGTCACCAGTCCTCTCAAAACCACCTTCC
ATCAACTCCTCCATACGAAACCTTCAAGATGACCACGTGGTAGTGCTTCA
ACAACAAAGAACTTCTTTCAAACAAGAACAGAAATCTCATCCACCACAAC
AAAGTGATGAGAACACATCAAAAACCATCCATAAATTACGTTTGAAATTC
CGCAAACTCCGTGATCGAGTACGACAACTGGAAGAAAAGCTGGAAAGATT
GACTTTATCGCAATATAAGTCATCGTATATTCAAGGGCCAAAGGATCGAG
TACGACAACTGGAAGAAAAGCTGGAAAGATTGACTTTATCGCAATATAAG
TCATCGTATATTCAAGGGCCAAAGgGTGAGAAAGGTGACAGAGGACCCAG
ggGTGAGAAAGGTGACAGAGGACCCAGgGGACCGACAGGTGCAAGAGGAT
CAATGGGTTTCCGAGGACTAACAGGACTACCAGGGCGTGATGGATCGTTC
AGTCAACTACCGTCCTGCAccccaaaacaatatttgtcttCCAATGGAAA
GAGGTTGATCTGCTTGACTTTTGGGACCGACAGGTGCAAGAGGATCAATG
GGTTTCCGAGGACTAACAGGACTACCAGGGCGTGATGGATCGTTCAGTCA
ACTACCGTCCTGCAccccaaaacaatatttgtcttCCAATGGAAAGAGGT
TGATCTGCTTGACTTTTGaGAAAGACACATCCATCCAACCAAACAATGGT
AACGGAGGAAACAGCGGAAAAGAACGATCAACGGAACAGCCGTCGTCAGG
GAATACGGACGACAGTACCACCGAAGAGACAGTCAACCCTGATGGAGGTG
TGGACGAAGGTAATGGAATAAGGCTACCGAACCCAACTATAAACGAGGaG
AAAGACACATCCATCCAACCAAACAATGGTAACGGAGGAAACAGCGGAAA
AGAACGATCAACGGAACAGCCGTCGTCAGGGAATACGGACGACAGTACCA
CCGAAGAGACAGTCAACCCTGATGGAGGTGTGGACGAAGGTAATGGAATA
AGGCTACCGAACCCAACTATAAACGAGGGTCTGGTTGGAAAGATCGACAA
ATTCTCAGAGAAAAAtcgcatccaaaatttttatgCCGATACCTGGGATT
TACATTCATTCATTTGGGATCAAAATACATATCTGGGTGTTTCCCAACTT
AGCACCCAGTCTTTCATCTTGAAGAAATGGGTACAGAATGAGTCTGGTTG
GAAAGATCGACAAATTCTCAGAGAAAAAtcgcatccaaaatttttatgCC
GATACCTGGGATTTACATTCATTCATTTGGGATCAAAATACATATCTGGG
TGTTTCCCAACTTAGCACCCAGTCTTTCATCTTGAAGAAATGGGTACAGA
ATGAGTTTATTGAGAAGGCCATTCTTACGGTACCGAACGCACGAAAATGG
ACGTCATTCGAATGGCAGTCAGAGCTTTACATCGTCATCGCCTGCAACAC
AAAACCCGCCCCGGGCGGTGGCGCTGCCTACTCTTATGTTTACAAAATGA
AGTATGATGAAATCACTCTCTTCCAAAGATTGGAAACCAGGACTGCTTTT
GGTGTGGATGCCATTGAAATTGGTTTATTGAGAAGGCCATTCTTACGGTA
CCGAACGCACGAAAATGGACGTCATTCGAATGGCAGTCAGAGCTTTACAT
CGTCATCGCCTGCAACACAAAACCCGCCCCGGGCGGTGGCGCTGCCTACT
CTTATGTTTACAAAATGAAGTATGATGAAATCACTCTCTTCCAAAGATTG
GAAACCAGGACTGCTTTTGGTGTGGATGCCATTGAAATTGGAAATGAGCT
ATACCTTGTTTTCGCGTACTTGCTTGGCGTTGGGAATGATGCTTATTCAG
ATGTATTCAAATGGTCGCAAGGAGAATTCAAGAAGGATCACTTGATCCCT
GTGACGGGTACCGACGTTGATACTTTCAGTGTGGGTTCAGAGCATTTTGC
TGCCGTTGTGGGTGTGACGTCACGTGAcccatttgtttatcttttgaaaT
ACAACGGAACGCAATTTGTGACCCATTACAACATTCCGATGGATTCGCGA
CCGTACGGCCTTACGTTCGTCCGTACCCGGAACGAATACTTCCTGGCGGT
AGCGTTTTACGACTTGCGACAATCTCTAATCTTGAAGTGGAATGGTGTGA
CTTTTCAACCGAACCAAAAGCTTGTTTCATCAAAGGAAATGAGCTATACC
TTGTTTTCGCGTACTTGCTTGGCGTTGGGAATGATGCTTATTCAGATGTA
TTCAAATGGTCGCAAGGAGAATTCAAGAAGGATCACTTGATCCCTGTGAC
GGGTACCGACGTTGATACTTTCAGTGTGGGTTCAGAGCATTTTGCTGCCG
TTGTGGGTGTGACGTCACGTGAcccatttgtttatcttttgaaaTACAAC
GGAACGCAATTTGTGACCCATTACAACATTCCGATGGATTCGCGACCGTA
CGGCCTTACGTTCGTCCGTACCCGGAACGAATACTTCCTGGCGGTAGCGT
TTTACGACTTGCGACAATCTCTAATCTTGAAGTGGAATGGTGTGACTTTT
CAACCGAACCAAAAGCTTGTTTCATCAAAGGCGAGAGATTTCGCAACAAC
AACCATCAACCGAGCAGGGCGAGAAATCACGTATCTGGCACTTGTAAACT
ACGAAGGGAAACCCATCATTTATATTTATAATgaacaaacaaaacaattt
ggaaAACTCCAACAAACGAACTCTAAGTGGACAAGAGATATTGAATTTTT
GCGTGTACCAAATAGTATTCATTTGAATTTAGCAGTAGCTTCAACTCGAG
AGATTGTGATATATAAAGGAAACACTACTTAAGCGAGAGATTTCGCAACA
ACAACCATCAACCGAGCAGGGCGAGAAATCACGTATCTGGCACTTGTAAA
CTACGAAGGGAAACCCATCATTTATATTTATAATgaacaaacaaaacaat
ttggaaAACTCCAACAAACGAACTCTAAGTGGACAAGAGATATTGAATTT
TTGCGTGTACCAAATAGTATTCATTTGAATTTAGCAGTAGCTTCAACTCG
AGAGATTGTGATATATAAAGGAAACACTACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000371_pilon | genome | sc0000371_pilon:244962..249473 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1438-1689:4261 |
| Aaloc | 1045-1437:3655 |
| Aaloc | 826-1041:3245 |
| Aaloc | 664-822:2831 |
| Aaloc | 562-660:2500 |
| Aaloc | 493-558:2434 |
| Aaloc | 487-492:2422 |
| Aaloc | 340-483:1969 |
| Aaloc | 313-339:1074 |
| Aaloc | 232-312:473 |
| Aaloc | 1-231:1 |
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