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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000060_pilon:81066..85737+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045470 ID=XLOC_045470|Name=XLOC_045470|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4672bp|location=Sequence derived from alignment at sc0000060_pilon:81066..85737+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAgatgattttaacaaaaatcaaGAGCTATGGCAAAACTATTTCAGGTA
TAATTTTTCTGTTGAAATTCTCGATTTTCAATGATCTTTATTATTACAAA
AAGCTCAATGAGAGGATATAAgtcatattttccaaaattaggTGCCCGCT
AATCCTTTAACCAAATATATTCCAGACTaaaaaaaTACATCAtttttttC
CTTCAGGATGGTGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACGT
AAGTCAATACAGTTGATGCCCTCTGATTCGGCATTCtgttattcgataag
ctcccattattcatgatattcatgacgtaatcttttatacggaagcaccc
gagataacccggaactagtggcaaaataacaaaagactagtggcaaattt
tgccactagttccggatTATTTTGTGTGCTTCCGTATAAAAGATTACATC
ATGAATATCATGAATCAATCAATTAAAAGTCATTTGACAAATTTCCTTTA
AATTTCTCATAAAAGATACTTCTTTATCGGACATTCTATCGCTATCATCT
CCCTGGGGTTGGGATATTTTAAGATTCATGATTTAACGATTTACGATTCA
CGATTTGCGATGCACGATTTCCGATCCATGTTCCAtgcataaattatgct
gatTTATGCATAATCATGCTAATCACaacaaaatgatttgaaaatggAGT
TTAGTTCggggggggTCGACATTCTTGAAAGATTCCCTATAAAGACCAAA
TGTTCTATTTCCTTGATTTTGCaataagtgaagaaaaaaaattaccctcG
TTCGGGGGGCCCTTCGTTCGCAATGGAATGTAATATTCCAATCttcataa
tttttgtttttgctgtTCTGAAAGGTAAAGCTTCTATGGATGATATATAT
TAATAATTACTCCTGCGTATAGCAACAAATGGGATGGCAAAACCATGAGA
AGTGTGACCTTGAATGATGGAACTACGCTCAGTTTTGATGGTAAGTTTGA
ACCTTTGAACATATAATCctataatacacccctgtgtcacagacccggtg
gaccctcaccccggtggaaaaataggccaaaaaatcgtccccggtggaaa
aaatatcctacaatttcaactccactgcgaaattgctctatgattttatc
cccattgaaaactgaatgtaaaacattgcactcaaaaaccatccccactg
gaattttcgagctggaaaaaatagattttctatccccattggcattttga
tagaaattttcatccccactgagggaaaaagttctaccggggcactgaga
caggggtgttataataATTGTAGGCCAATCTATATCATAGGATTTGTACA
TCtgttaaataatattttctatCCAGTTTAAAGGGGAAAAATGCACTATA
AATGTATCtgaagatttgatttgatttgatttttttttcatcattcatTT
GATTCAATGTTCAAATCATAATCTCATTTCATTGACAGTAGTGAACAAAC
AGACGATTAGACACTGCCAGACAACAAAGGGCTAACCATACGAGATTTAG
TGTTGCGGGTGTGTAGTGGAACgagttttgagaaattttaggaAAACCGA
AATACATTAAACTCTCGAACccctactattcgaatctttctataattcga
actgaaaTATTAGTCCGCTCAGTTGGAAAGTTAATTAAAGTATCGTCCGT
AattatcaaatctttttttaatttgaagaaaatcctTGGTCCCACGAAGG
TACGGGTCCTTATTTTACCCGAAATGCTCACTTTCTTATTATCAATAGct
aaattttgtcaaaatttcaagtcaatagcattttccAATCACTAGATACG
GTATCCTATGACTGATTTAGTTAAAAGGGCAAATTCGagcggatctgtaa
aataaacgATACCAGCAGGTCTCGAAGTTGTCccacaaaatttgagcaaa
aagaAATTAGAGGGGGTCCTATTTTCGGTATTCTCAGAGACTGATGACGT
CACCCAAACCCCTTTTACCCAAGATTCTCAAGGTTTAACgttttagaaat
aatttgagaatattttaagacttgATGGCCTGATGACCTCACTTGAAAGG
GTTTTTCTCTTATTACGAAATGGGAGGGATACAAAGACAATCAACTGAAA
TTATaataaaagagataaaaaaatgtcaatttcatCCTCAAGGGAacgat
ttattttttttcttctcctgCTATAAAATGAAAGTTTCGTGCGTTTattt
catttgctttttatatttgatggTGGTGGGGTGACTGGTTTTTGTGGAAa
agtgaatgaatgaatgaacgaatgTAATCGGAGaaatttctagatttttt
aCCTTTCATTTTCTGAAAGTACGGGTGCAAAATTACATTTATTCAAGcta
ggattttttttaaataaaagttagtTCAGATTTATATGACGATTTGAGAA
ACACATTACATATTAGCACGtctattttttcatcttttatcacaatttcg
tgattctttttcaaaatgaggcatagttttttcGGATTGCATCTCAAATA
GTTCATGTGTACTTTTCTGTTTTATCTGTGCTGTTTGTGTAATAGTTCAc
gcaaaatttcacttttgacaaataattctattttgaaaactttttcgact
ttttcacattttgagaaatttttcgtggaatttattttttctcagaATGT
GGTCGAGTTTCGTTTTCcgcattgaaaaaattaatttccttctgaacaaa
aatttttcatctaAACCaaaaaaaGATTACTTCATCAACCTGGaagcaaa
tttcaatttttcaactttgagtCTTGATTTAGTTCTTGAGATCtacatct
tcatttttttcaacttcaatttttttaccgtcactaataaaaatgatttc
ttgctgagcaaaaagttttcattcaaaattcaaaattttttcgccatcaa
ttcggaaatatttttctcgttctgTTTGCAAAATTTAAGCTCCAAAGTAT
TTTTGGTTCCTGAGAATCGAagtaacgaaagtgccaaatgaatttcaaat
tttgaaatttgaaaagaagtaaaaattttcaaatttcaaaatttgaaaaa
tgaaaaatacaaaaaaattttgattttcaaattttgaaattaaaaaaatt
gtttataccCCAATCGACGTAATAAAAGTGCCAAAagaggtttttaaatt
ttaagtatgaataaattgggctattccatttttaaactgtacaggggtat
tgacgaaattTTCAAGGAGGGTctaagccttgattttccaaggggttttt
gttcctttttcagcttttccaagggggttattcaAGGTTTATAGGGGGTT
CTCCCCTCATAAACTGACATCAGTTGTTTTCcagccctttttcacaaaat
ttagttttccagAGGGTTTGTATcccaatttccaggggataatttgctat
tcaatatttccaggggggctagtgaaaaaagttcgtcaatacccctgtat
aattttttttagaatagccCATTAGAAGGTTAGCAATCTGTGTTGACGTC
AACAGGAGGTACACTAAAAGTGCAATAATCACCTAAAGCCCTGCAATTCG
AGTGATTCTATCTTTGAGagaattgattggttgattaacGTCACGTGACC
CGTCAATAGACTTTTTGTTCCTAGTATACAGAAGTGTGATTTGCACACAC
TGTAACATCATAATTTGACCTTAAGAACGTTTAGGTAATCAACTTTACCA
TATAAGGCAAAGAAACCACGTTATGGGGGTTTAGAACGATGTTTACTTTC
GACTAATATAGCCTAATATCTGAGACAATAGGCAAAAAACAGGTGGATAT
TTTGTCCCTTCAATTTCACGAAtatgttttttcaaagataattctattag
tttgcttcttaaatttcagataaatgaaaaaagtgtgacaaatataattt
ttaaaatttaaacctttaattggcacttttattacaacgagctttgtcca
attttaagcaatactaaaaattttccatttttcatttttcaaattttgaa
atttgaaaatttttacttcattttaaatttcaaaatttgaaaatcatttg
gcactttcgttactTCGATTCTGAGATATCGAGagtcattttttgttgaa
ttttttttttactcggtgaaagttttaaatttcttctttttttcttcaga
tgtttggaaaattttgaaggaaaagaaattcgcgaaattcgaagaaattt
tcCACCAAAAACCGAACATCGTCAACTCGATGCGTGGTGTATTTGGTTAC
ACACTTCTCATGGAGGCTGTTGTTGAAGATCGTTTCGACGTTTTCGTTCA
CTTGATGAATTATCCTCAAGATTTTTCACTCGTGGACAATGAAGATGGTC
TGAACGTTCTTCATCTTGTTGGTTATTATGGAACAGTTCGTCATTTGGAA
CAATTTGATcaacaaacaatcaaaaagttGATCAACGGAAGAGACGGATG
GAACAGAACATCATTGCATCGTGCAGCACAGGGCaacaatcatgacgtca
tcagatggtTGTTGGCCAAAGGAGCGGATCatgaattgaaaaacaaagat
ggtCAACGCCCTGATGAACATCCTGATTGTGATGGTTTTACCAAAGAAAT
CTTTCGATCGTTTCGTTCGTCT Coding sequence (CDS) from alignment at sc0000060_pilon:81066..85737+ >XLOC_045470 ID=XLOC_045470|Name=XLOC_045470|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000060_pilon:81066..85737+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAgatgattttaacaaaaatcaaGAGCTATGGCAAAACTATTTCAGCTA
gatgattttaacaaaaatcaaGAGCTATGGCAAAACTATTTCAGGATGGT
GTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACGATGGTGTTTACTC
TTTCAACTTCCATTTCATCTTTGGGAACCAACAAATGGGATGGCAAAACC
ATGAGAAGTGTGACCTTGAATGATGGAACTACGCTCAGTTTTGATGCAAC
AAATGGGATGGCAAAACCATGAGAAGTGTGACCTTGAATGATGGAACTAC
GCTCAGTTTTGATGatgtttggaaaattttgaaggaaaagaaattcgcga
aattcgaagaaattttcCACCAAAAACCGAACATCGTCAACTCGATGCGT
GGTGTATTTGGTTACACACTTCTCATGGAGGCTGTTGTTGAAGATCGTTT
CGACGTTTTCGTTCACTTGATGAATTATCCTCAAGATTTTTCACTCGTGG
ACAATGAAGATGGTCTGAACGTTCTTCATCTTGTTGGTTATTATGGAACA
GTTCGTCATTTGGAACAATTTGATcaacaaacaatcaaaaagttGATCAA
CGGAAGAGACGGATGGAACAGAACATCATTGCATCGTGCAGCACAGGGCa
acaatcatgacgtcatcagatggtTGTTGGCCAAAGGAGCGGATCatgaa
ttgaaaaacaaagatggtCAACGCCCTGATGAACATCCTGATTGTGATGG
TTTTACCAAAGAAATCTTTCGATCGTTTCGTTCGTCTatgtttggaaaat
tttgaaggaaaagaaattcgcgaaattcgaagaaattttcCACCAAAAAC
CGAACATCGTCAACTCGATGCGTGGTGTATTTGGTTACACACTTCTCATG
GAGGCTGTTGTTGAAGATCGTTTCGACGTTTTCGTTCACTTGATGAATTA
TCCTCAAGATTTTTCACTCGTGGACAATGAAGATGGTCTGAACGTTCTTC
ATCTTGTTGGTTATTATGGAACAGTTCGTCATTTGGAACAATTTGATcaa
caaacaatcaaaaagttGATCAACGGAAGAGACGGATGGAACAGAACATC
ATTGCATCGTGCAGCACAGGGCaacaatcatgacgtcatcagatggtTGT
TGGCCAAAGGAGCGGATCatgaattgaaaaacaaagatggtCAACGCCCT
GATGAACATCCTGATTGTGATGGTTTTACCAAAGAAATCTTTCGATCGTT
TCGTTCGTCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000060_pilon | genome | sc0000060_pilon:81066..85737 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 352-627:4397 |
| Aaloc | 160-351:4202 |
| Aaloc | 91-156:924 |
| Aaloc | 49-87:208 |
| Aaloc | 1-45:1 |
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