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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:81392..85140- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045453 ID=XLOC_045453|Name=XLOC_045453|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3749bp|location=Sequence derived from alignment at sc0000085_pilon:81392..85140- (Clytia hemisphaerica_ch_hm2_pilon)
AACATTGTAAGAAGCAACAAGATGGTAGTCCGAAGACAAGGTAAGATTTT
TTCAAAACACCCCTGTCCCACAGTCCCAGTAGGAATTTTTTTTCACAAAA
TCTATACAGAAATCCCAATGGGAATAGAAATCCTATTGTTCGAAAAATCT
AGTGGGGTGGGTTTGGAGGCTGATTTTTTCCTTGAATTTCAATGAGGATG
GGACGAAATTCAATTTCCCAGTGGGACAGGGGTCAAAGCTGGTCTATGAC
ACAGGGGTGTGTCAAAGATTGTCAATAAATTCCAAGTATGGCGTTTGCCT
TCATATAAAACTCGTATCGTATTGAACACATAAACTTGTATCGTATTAAC
TCTATCTCACTGACTCACTGAGACAGGGGTTTTAAATGTCCTTTGCACAC
ATAAATTCCAGGGTGAAAGATAGAATTAACAGCAAAAGAACACCTATCTG
GCACTCATCGCAGCCACACCTAACAGTTTGTCTTTCGTGAACTGTGCTAC
AAAAACACCATATAGGGGTTGTTGTAGAAAAATGTAGAAAAATTTGAAGT
CAAATATCTTTTTCCAGGATACCTTCTTCTCTTTGTTGTTGTGGTCAAAT
TATGTCAAAGCGTTCCCATAACAACCACAACCCAACAACCAATCACAAAT
CGTCCTCACAAAGATTGTTTTCCTTCGGGATTCGAATTCGCTTATGATGA
CGTCATCGATCATGGGAATTTCCCTAATGGTGAAACATGTTGGCAAATTA
CTTGTGGTCCGTCGGGTAGATTGATCAAGTCTTTAACACCTTGCGAAAAA
GTGATGACTCAGCGAAAACCTACAGCAAAACCTTCAGAAGAAAAACAAGT
AGAAAACCAATGCATTTTCAATGGAAGAAAATTCAACCCAGGTACATACA
TAATGTTTAATTACATGCTTTTCATATAAGGAAGATTTGAGCTGTTTTAG
GTTAAAAATGCCGTAATATGATTACTTTTGGACACACCGGGGTCGTTCAG
ACATGTATTTAAATTCAATTTAGCTGCTGACTTCAATGCAAACATAACTG
TTATGACATATGAAGGGGACATTTGACCTTGTAAAAAATTTAAGATTATC
AATCTAATGGTTTCAAATTACACCTGAATAAAGGTCCCAGTATTGTGCTA
AAAACCTTTTGTCGTCATCAGGTAGAAACTGAAAATAATTTTGATACCTA
TTGTAGTTCAATTTACAAACATTTTATACAACTTTTTGAATGTAGCTGCC
AATTGCCGCGCGGGCATTTTTTTTGTCCGTTTTACCACCCTAAACAGGGC
CCCGGTTTGAGGGCTGCAGTGAGGGGGCCAAATATTGGGGTAAATTGGCG
TTACCCAATTTTGAGTTTTGAGGGGTTAACTTTTTCAGGACGGCCCCAGC
TAACTTCGTTCCTTTTGGAACAATACTTTTCGGCTGCCGTAATTTTTTGT
AATTTAAAAATTTGGCACGCTGAATAAATAGAGCATTAAAACGAGCTTTC
CAACGAACCCAAACATGACATATTTAGATTGTTTTAAAGCTGAGATAATT
GCATCTGAAGTTGGAACTTCTAATGAAATGTAACTGAAAGTTTTCAAAAT
AGACTTTCTCGGAAAAAAAGTGAGGAGCCATGCCCCCTGCCCCCCCCCCC
TATTCTAAAACCGACCCCAGTCTTTTTTCGCACCTAAAGACAATAGAAAA
TAGAAAAAAGTGTAAGAAAAGGATTGGATCAAGTTTAGGGTGGCACGCAC
CTGACCACACGACTATGGTCGAAAAGGTGCATTACATAACATTAGAAAGA
TAATCTATTTTCCTTAAGAAATACCCGCCAAGTTACCGAGATCCTAAACT
AGTAGTTTAAATCATAAGGGTTGAAAACGTTACTTAAATTTACATGCTAA
ATCTTAATCATCGGGTGTGTGATCATTAAAAAACTGGTTTGCTACTTTGA
GGAACTTAGAAAAAGCCTTCCAGGATCTGGCTGTGACACTCACTTTGCAC
CAATCCAATAATGTCGGGGTCGTACCTACATGCCATTTTTGTATCGATTA
GAAATGTTGAAAAATCGTCCGATTGAGCTCTTAAGGGCTCTGACCATAGT
CCAAAAATTGATTTTAGTATTTGAACATAAAAGTTATATTTCAGGTTCCT
TAACACTTTAACAAAGAATTGCCTTTATAAATTGCTTTTTAATTGAATCC
CTTAAGAGTAATTAAGAAATTAATTGCAAAAATGACGTTATGAACTTTAA
AAAGATCTTAATAATATGTTGCATCACCCTCTTTTACAAAAAGTGTTTAG
TTTTAATGGGTAATTAACTTTTTTGTTTCAAAATTTCTTTACCCTGTCCG
CAAAGAATTGAACTATTTTAAATTTTGCGGAAAATTTTTCTAAAAAGATG
TGTCAAAAGTTATGACTGTTTTTTTAAGCAAAATCCAGATGAAAAATTGA
TGAAAAACCACTATTTTGAAGATTTCGAGACAAAGAAGCATTTACAAAAA
TTTTCCGCAAAAATTTTTATTGTTCGGTAAAAGATGCACCATCTACTGCG
AAAAATTTTTCAAAATGTTTTTTCTTCGCCGAAACTAAGCTCTTCAAAGT
TGAAATACTCTTCCTCGCAAAAGTCTTCATTTTCTTCTTCATCAAATCTT
TTCAATGCAATTTTTGAATTTTCAGATTCAGGAATAGTTTGTCTAACAGA
AAATGTATAACATGCCATAGTTTTGTTGGTTACATCAATCAGAAAACACA
TTTTAAACACGGCAATTATGAAAAATTCACTATGGTCAGAGCCCTTAAAA
GTCGTTTGTTTGTTTTCTAGGGGAAGACATTCAGACGCTCTCTGATTGGC
AATCTGACCGTTGCTATGGTACCCGATGCAGTAAAGATGGTACCATAGTT
GCATGGGAAAACATCAATTGTTATTCCACACCTTACTACAGCACTACGGA
GAAGGGTGGTAGTGTCCAAACTCCCGAGTTTATTACCACTCCATCGCATG
TAGAATTATCAACAACTGAAGCTTCTGGGTGTTATGAAAATAGTGTGACT
TACCAACCCGGTGAAGAGATTAGTTTCCAGTACTTTACGGAAAATCAAAC
GTGTTGTGGACGCTATTGTAATTATAGCAATAAAATTGTTTCTTGGGAAA
AATCCGAGTGTGAACAAGGAAAATCGACTGTCGAGCCTACTTCGCAAATT
ACTACATTTGGTTCAACCACAGATACGGATCAAGGATGTTATACAAATGG
CAGAGCGTACAAGCCAGGAGTACACATCGATTCAGGTAATGATGGTTCAA
GTTGGTGTTTCGGTCGATATTGTAATGAAAACTCTGTTATTGTCTATTGG
GATGATTTCCATTGTGACGTTAAATCTTCTAAAAAGCCGTCACTGATTAT
ATCAAAATATGACTTCACAAAAACACCGATGACATCAGAATATGACGTCA
CAAAGCAACCAGTAACGTCAACTAGTGACTTAACAACGACTTTGATCACA
TCGACAAAGTTTGATGAAATTTCAACATTAGATCCTAACCATTTGAGTAC
ATCAAGTGGAGGCCTTTCTACTACTACAGAGGAGGAGGTTAGGACTGAAC
AGCCACCAGTGGAAGGCTCTCTATGGGAGCAACTTCAGTTTTTAGTGAAA
AACAAACTATATTCAACTGTAGTCGAGGATTCTGGTTTAACGAAATCAAA
GGATGGGAAATATCAAGTGAAACTGTCTATTTTCAAAAAGAAATCATAA Coding sequence (CDS) from alignment at sc0000085_pilon:81392..85140- >XLOC_045453 ID=XLOC_045453|Name=XLOC_045453|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2586bp|location=Sequence derived from alignment at sc0000085_pilon:81392..85140- (Clytia hemisphaerica_ch_hm2_pilon)
AACATTGTAAGAAGCAACAAGATGGTAGTCCGAAGACAAGAACATTGTAA
GAAGCAACAAGATGGTAGTCCGAAGACAAGGATACCTTCTTCTCTTTGTT
GTTGTGGTCAAATTATGTCAAAGCGTTCCCATAACAACCACAACCCAACA
ACCAATCACAAATCGTCCTCACAAAGATTGTTTTCCTTCGGGATTCGAAT
TCGCTTATGATGACGTCATCGATCATGGGAATTTCCCTAATGGTGAAACA
TGTTGGCAAATTACTTGTGGTCCGTCGGGTAGATTGATCAAGTCTTTAAC
ACCTTGCGAAAAAGTGATGACTCAGCGAAAACCTACAGCAAAACCTTCAG
AAGAAAAACAAGTAGAAAACCAATGCATTTTCAATGGAAGAAAATTCAAC
CCAGGATACCTTCTTCTCTTTGTTGTTGTGGTCAAATTATGTCAAAGCGT
TCCCATAACAACCACAACCCAACAACCAATCACAAATCGTCCTCACAAAG
ATTGTTTTCCTTCGGGATTCGAATTCGCTTATGATGACGTCATCGATCAT
GGGAATTTCCCTAATGGTGAAACATGTTGGCAAATTACTTGTGGTCCGTC
GGGTAGATTGATCAAGTCTTTAACACCTTGCGAAAAAGTGATGACTCAGC
GAAAACCTACAGCAAAACCTTCAGAAGAAAAACAAGTAGAAAACCAATGC
ATTTTCAATGGAAGAAAATTCAACCCAGGGGAAGACATTCAGACGCTCTC
TGATTGGCAATCTGACCGTTGCTATGGTACCCGATGCAGTAAAGATGGTA
CCATAGTTGCATGGGAAAACATCAATTGTTATTCCACACCTTACTACAGC
ACTACGGAGAAGGGTGGTAGTGTCCAAACTCCCGAGTTTATTACCACTCC
ATCGCATGTAGAATTATCAACAACTGAAGCTTCTGGGTGTTATGAAAATA
GTGTGACTTACCAACCCGGTGAAGAGATTAGTTTCCAGTACTTTACGGAA
AATCAAACGTGTTGTGGACGCTATTGTAATTATAGCAATAAAATTGTTTC
TTGGGAAAAATCCGAGTGTGAACAAGGAAAATCGACTGTCGAGCCTACTT
CGCAAATTACTACATTTGGTTCAACCACAGATACGGATCAAGGATGTTAT
ACAAATGGCAGAGCGTACAAGCCAGGAGTACACATCGATTCAGGTAATGA
TGGTTCAAGTTGGTGTTTCGGTCGATATTGTAATGAAAACTCTGTTATTG
TCTATTGGGATGATTTCCATTGTGACGTTAAATCTTCTAAAAAGCCGTCA
CTGATTATATCAAAATATGACTTCACAAAAACACCGATGACATCAGAATA
TGACGTCACAAAGCAACCAGTAACGTCAACTAGTGACTTAACAACGACTT
TGATCACATCGACAAAGTTTGATGAAATTTCAACATTAGATCCTAACCAT
TTGAGTACATCAAGTGGAGGCCTTTCTACTACTACAGAGGAGGAGGTTAG
GACTGAACAGCCACCAGTGGAAGGCTCTCTATGGGAGCAACTTCAGTTTT
TAGTGAAAAACAAACTATATTCAACTGTAGTCGAGGATTCTGGTTTAACG
AAATCAAAGGATGGGAAATATCAAGTGAAACTGTCTATTTTCAAAAAGAA
ATCATAAGGGAAGACATTCAGACGCTCTCTGATTGGCAATCTGACCGTTG
CTATGGTACCCGATGCAGTAAAGATGGTACCATAGTTGCATGGGAAAACA
TCAATTGTTATTCCACACCTTACTACAGCACTACGGAGAAGGGTGGTAGT
GTCCAAACTCCCGAGTTTATTACCACTCCATCGCATGTAGAATTATCAAC
AACTGAAGCTTCTGGGTGTTATGAAAATAGTGTGACTTACCAACCCGGTG
AAGAGATTAGTTTCCAGTACTTTACGGAAAATCAAACGTGTTGTGGACGC
TATTGTAATTATAGCAATAAAATTGTTTCTTGGGAAAAATCCGAGTGTGA
ACAAGGAAAATCGACTGTCGAGCCTACTTCGCAAATTACTACATTTGGTT
CAACCACAGATACGGATCAAGGATGTTATACAAATGGCAGAGCGTACAAG
CCAGGAGTACACATCGATTCAGGTAATGATGGTTCAAGTTGGTGTTTCGG
TCGATATTGTAATGAAAACTCTGTTATTGTCTATTGGGATGATTTCCATT
GTGACGTTAAATCTTCTAAAAAGCCGTCACTGATTATATCAAAATATGAC
TTCACAAAAACACCGATGACATCAGAATATGACGTCACAAAGCAACCAGT
AACGTCAACTAGTGACTTAACAACGACTTTGATCACATCGACAAAGTTTG
ATGAAATTTCAACATTAGATCCTAACCATTTGAGTACATCAAGTGGAGGC
CTTTCTACTACTACAGAGGAGGAGGTTAGGACTGAACAGCCACCAGTGGA
AGGCTCTCTATGGGAGCAACTTCAGTTTTTAGTGAAAAACAAACTATATT
CAACTGTAGTCGAGGATTCTGGTTTAACGAAATCAAAGGATGGGAAATAT
CAAGTGAAACTGTCTATTTTCAAAAAGAAATCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:81392..85140 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 754-1308:556 |
| Aaloc | 379-750:928 |
| Aaloc | 55-375:3181 |
| Aaloc | 13-51:3750 |
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