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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1849276..1853716- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045422 ID=XLOC_045422|Name=XLOC_045422|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4441bp|location=Sequence derived from alignment at sc0000044_pilon:1849276..1853716- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACAGCAGGAACAAGTTTCCACAGATTCTGATAAAAACGCCAAAGC
AGGACGACTGGTTGACAATGAAATGAAAAAATTAGTTTTGAACCAATACA
ACAATAGAGGCGCTAGTGATGGAAGGTATTTTGATTTTTATTACATTGTT
TTTTCACTAAAGGGGTCATGAACCAAAATTAAATTTGATGCTTGACATCC
CTAGATGAAATTCTCTTAAATACTCTTTTTGCTTTAAAAACATACATATC
AGGCTCGCATTATGCTGTCAAATATTGTTGTCAAAAAATAGAGCCATTGT
TTGGGTGCCAAAAGTTGAGCCTGCATATGTTTATAAAATTTATGCCTATA
AAAGGAAAAATGTACGGGAAATTACAGGCTCATTATGCTTAGCAAACTTT
TATTTTCAGCCTCAAATTATGCTTGGTTATCATGGTTCCGAAAGTCTTTT
TCAAAACTTCGTCAATTTTGGCTGATTTTTATTTTCACTTTCACTTTTTT
ATGATTTCATCCACACTCTGAAGGTGTACAGTATTCGATTCAAAACTACT
TTCATTTTGTATTTTCTTTTAAAATCTATAAAAAATACCATACAAAGGAG
ATGCGTACTCTTAGGTTCCAAATAAACGGGGGGTTCGAATAAACGGGGGG
GTTGGAAAATTTTCTAGATTTTAATAAACAGGGGGGACCTAATTGCCGGC
GGGGTTGGAAATTGTACTTCTGAAACCCAAAAATAAGGTAAAATAAACCA
GCTGCGCTGGAAGGTCGCCTAAATGGAATAGCTTTTTAAAGAGCTTAAAA
GTTTGAAAAAAGTAAAAGACGAAAAGCTTAACAGTGTAACACGTGATTTG
CGAATGTGCAAAATTGTTAAAAAGCAACGTGCTTTTATGATATTATTTTT
GTCATCCCTAAAATATTAAAGGTTTTCAGAAAGTTATCATTTTTTAAAAC
TGACATTACAATCATGGACAAAAGGTTTGTAGACTTTTGCAATATTTGCA
AAATACTTCAATATCGATCAAAGACAAGTTCCCAAGAGGTTCTGTGTGCT
TTCCAAACCCATCCAAAGTCTTTCAAAGTCACCAATTGCAGTCTAACCAC
ATGGGCTTGATAAACTGGCTTACACCAGTATCAAAACGCTGATTTTTTGC
TTGTGGTTCCCTCAAAAGCAATTCAAAAGCAATGCAACGACTTCAAAAGT
GTTATTCTTAACTTCCCTCCCTTTTCAGACACATTGAAGAGTCATTTTGC
TCTATTTGTCATCATTTGTCTACAACCTTTTGTCCATGATTGTAGGGATA
TAGATGAAAATAGCCCAAATTTGTTCTGAAGGGATGAAAAAACCGTTTCA
GTTAAGGACACATTCAAGTTATAGGGTTTGAGTTTGAAGACGGTCACTTA
ATCATATCATGTTTAACTTATATTAATGAATGTTTCTTGTTTGTACAATA
AAAAATTGTTGCTAGAAAGTTTCAATAAATTGGGCTCTTCCAGAAAAAAT
CCGTTCATGGGGGGTGGAGGATGAATTGTCCAGGGGTGGGGTTATACCCC
TGGACAAACATCAAATCAACCCCGTGGACACAAAAAATTACCCCTGGACA
TTGGAATTTACCCCCTGGACATTGCAATTTTTTGGTATTTTTTCAATACC
CCTGGACAATTCAAATTCAAAAAATAATATATCATCCACCCCCCATGAAC
GGATTTTTTCTGGAAGAGCCCATTATTATAGTAAATCTAATAATACAGTT
AAAGTATTCTTAACAAAAGTAAAGACTTTGGAGGGAATTTAATATGGCTG
CGAGCTTTGAAAAATTAAATTTGACGGGAAGTTATTTGCCTTAAAATAGA
TAACATTTGAGGAAGAGAAAACAATAATCTAAATTTGGCGGCGGATGGCA
GTAAAAGTTACATGTGGATGATTTCGGCCCAATCCACCAAATTAAATTTC
CGCTAAATTTAATTTTCAAGTTAACCACCAAATTAAAAGGACCCTCCCGG
CGCTCCAGAAACTTTCGGAGTTTTCAAGAGCAGCTAAAAAAACACTATTT
TCATCTCCGGAAAGTTACTCTTAACACAGCTCCAGAGTTCCAGTGTAGAT
CAATTGCCGAAATAGGAGAAAAATGACACTTTTTACTCCGGACGTTTCTG
GAGTGCTGGGAGGGTCCTAAATTGAATTCCCTCTGAAAAAACTTTTTCGG
CCATCCACCAAATTAAATTCCTGCCAAAATTTCTTCTTTTAATGTAGGTG
CAATGTCACGTTGTGTAATCAAAACTGCAGTAAATATCTTAATAACTCCA
TGTTTCAATGGATGCAAGGGGAACAACAATAATAATCAAAAGGGCCATTC
CAGAGAAAGGATACGTAACGTCACTCTCATTTTTGACTAAATGCCAGTAG
TCCCCTACATAGAGACTGTTGTTCAGCTGGTGGGCATAGACTCCAATAAT
TTCAGTTGACAACTGGACAATATCTTGAAATGGCCCAAAAATTGTGCCCG
AAATAAAAGAAATGGTAAACTGGCTGCCAAACAGCCGACAGTTGTGTACA
TGTTTGTTCAAGAAATTTCAAGTCAATACTTTCAATGGTTACACTTGTCT
TGGAACGGTGAATCGTCAATCAAATCTTGCTTTAGCGTTTAGGTGATAAA
TGTTCTTTTCCTGCTTCACTTTAAATCTGCTAATTGTAGCTAAGGTACAT
TGGTAAGGTTGCCATATATGCAGTGATTGATCTTGGATGGGACATGCTAT
CAACTGTTATCATAGATTTCGAGTAATTGAAACAATAATAAACTTCTTGT
TATCTAGTCTATCTTATTTTTCTTGTCAACACAAACACATCCATCTTCCA
AGTCCAAGCAAAACCAAATGTTTTAACATCTCAAAAGTGATTCTAGTGAA
AGGAGGTTTGTTTTCAACAACATCACGAGTGTGGTAGTTTGAATGGAATA
ATATCAATGAAGAACCATAAATTTCAATTTCAATTTTGAAGAATCCTTAT
TGTAGTTGTAGATTTAAAATCTACATCAAGAATTATCTTGCTGTTTGCAC
TTGCAGTAGAAACTTTTGACAAACTTTCACGAGACTTTTAATTATCTCCG
TTATTTAGATTTCATAAAACAAGTGCGCTAACTACTACGGAGCTAATTAG
AATCTATACACCGCAAATACTGTCCGATAAGTTTGCGTGGCGTAATATAA
CAGAGATAAAACGGCTTATGCAAGAATTTACGCGGGAAATAATTTCCCGA
TTCACTGAACATTTAATTCCGAATCGGGCGACCAAACTTTCACAAAAAAA
GTCTTATGGAGAAAACACCGAATTTAAAGGTCTCCTTCACTTGCGTGAGG
CGACCAAATAGGCTAAAATCACGCTATTTAGAGCAAAATAAGGGGCCTTC
TCTTTAACAGCTGAAAATATTCTTAGAGATTAATAAACGGGGGGTCCTAA
TAAGGTCCGGGGGGTTGGAAAATTTTCGAAAAATTAACAAGCGGGGGGGC
CCGTTTATTTGGAACCTAAGAGTAAACACAAATGTATTATTTGAATGATG
AATTTTCTAAGCTTCGAACTATGCTTATCATTATTTGTATTTTTTTGCAA
ATTTGAGCCTCAGTTTGCTTAAACGTTATGCTTTCTAATAAAAGAGTGTA
TTTGAATCACAAAAAATTGTAGAATTTGATTAATGATTACACAGTATCGA
ATAATCCTGTCGGGGGGGATTATTGTGATAATATTGTTAATACATTGAAA
CAGCAGAGAGTGACAGTTCCCCATAATATTTTATGTGTGTCTTGTTATCG
CTTCAAATTTGAATTTTAGCTTTTGTTTGTGTTTCAGTGACGATTCTGAT
GGTGAATCGGCAGCAATGCCTTCAGGTACCTTTTTACAGTTTTCTATAAA
GTTTAATGTTGACGCTCTCTAATTCCACGTTCTACTATTCAATACGCTCT
AGTATTTGATAATATTGAAAGTCACGGTCAACAAGAAACTCTCATAAGCG
ATGCTCTACTATTGGATACGCTCTTTTATAAGTTTTGTTCAATAAAGCTC
TTTTTTTGTCTTGGCGGAACAAAAGATTTTTCTCAAGCAAATTCTCGTCA
ATATGTTTTGTATTTTTTGATTCCAAACCAATATAACCTCTTTTCTGAAT
GTTGAATGGAAGCAATCATCTAAGAACTGGAAAGCAGTCAAGCTAATTTT
AAACGAATTCATTGACCGGTTTAATCTATTTATTCCTCCAATTTTTGCTT
TCTCAGGTTTTCAAAATGTGAACGCTGAATCGGTAGTGAGAAAACAGCAA
GAGCAACGTGACAAGGCGAAAAAAGCCAGCGACGAGAAGAAAGTGCGTGA
TAAATTAAACCGTGATGTGCAAAAACAGAAGAAAGACGATCGGAAAGAGA
AAGAAAAACAACGAACGCAAAAAGGGGAACGTCGCAAGTGA Coding sequence (CDS) from alignment at sc0000044_pilon:1849276..1853716- >XLOC_045422 ID=XLOC_045422|Name=XLOC_045422|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=696bp|location=Sequence derived from alignment at sc0000044_pilon:1849276..1853716- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACAGCAGGAACAAGTTTCCACAGATTCTGATAAAAACGCCAAAGC
AGGACGACTGGTTGACAATGAAATGAAAAAATTAGTTTTGAACCAATACA
ACAATAGAGGCGCTAGTGATGGAAGATGAAACAGCAGGAACAAGTTTCCA
CAGATTCTGATAAAAACGCCAAAGCAGGACGACTGGTTGACAATGAAATG
AAAAAATTAGTTTTGAACCAATACAACAATAGAGGCGCTAGTGATGGAAG
TGACGATTCTGATGGTGAATCGGCAGCAATGCCTTCAGTGACGATTCTGA
TGGTGAATCGGCAGCAATGCCTTCAGGTTTTCAAAATGTGAACGCTGAAT
CGGTAGTGAGAAAACAGCAAGAGCAACGTGACAAGGCGAAAAAAGCCAGC
GACGAGAAGAAAGTGCGTGATAAATTAAACCGTGATGTGCAAAAACAGAA
GAAAGACGATCGGAAAGAGAAAGAAAAACAACGAACGCAAAAAGGGGAAC
GTCGCAAGTGAGTTTTCAAAATGTGAACGCTGAATCGGTAGTGAGAAAAC
AGCAAGAGCAACGTGACAAGGCGAAAAAAGCCAGCGACGAGAAGAAAGTG
CGTGATAAATTAAACCGTGATGTGCAAAAACAGAAGAAAGACGATCGGAA
AGAGAAAGAAAAACAACGAACGCAAAAAGGGGAACGTCGCAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1849276..1853716 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 166-348:184 |
| Aaloc | 127-162:604 |
| Aaloc | 1-123:4442 |
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