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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1800909..1803053+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045420 ID=XLOC_045420|Name=XLOC_045420|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2145bp|location=Sequence derived from alignment at sc0000044_pilon:1800909..1803053+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATTCAACTTTCACCATATTAGCTTTATTTGCATGTCTGGATATCGC
ATATTCAGTTACTTTAGCCCCAGATTcatttaaaatacaaagttattttg
atataaaaaatacTCACGAAATTTACCAAAGGGCTAATATTCGAACAAAT
GGAAAAGGACATAACTATAAATTTGTGAATCAAAGTTTCGGAGTTTTAAC
AAGCCCAGGATATCCTGTTCCATTTCCTGGCAACACAACTACAAAATGGC
GGATTGAAATGCAAGATGGTTCCCGCATTGTCTTGATGATTCGACAGTTT
TTCTTTGGGCCTGGTGATGAGTTAGAAATTTACAACTATAAAAATGAAGA
GACTCAACTGTACACATCCCAAAAACCACCAAACGATCTTATATTTTTGA
CTTCAGATGCGTTGGACATAACATTAAGAACTTCTTCGTCAGACATATCC
GATTTGATCAATATGACTGGAAGGCATGGTTCAAAACAACGGTTGTTTTA
CGCCATGTTCGAGCGAGAAGGATGTGGGGGTGTTTTGACTCGATCACACG
GATACATaaacattccattttatatacaCGAAACCAAAAGACCTCACGAA
TGTTTATGGACTATCGAGGCTGATGATGATCATGTGATCACTTTAGAATT
CTTGGACTTTGAACTCGCACCAGGCTCCTGTATTTACAACAATATTTACG
TACGTGATGGTGATTTTGATGGGGGTTACTCTCTAGGAGATTTCTGTGAA
GAAAATCCACCTTTTAGTAAGCTAAGGTCTGTTAGAAATACAATGTCGAT
TGTTTATAGAGTACGACCGAATCTCTACGAAGGAGAACATAACCAATTAC
CTAATATTAAAATGTTCTATCGGATGGTCGATAGCTGCGGTGGAGATCTT
GAAGGTTATTCAGGGAACTTCGAAACACCAACATACTGGCATAATGAGAA
ATATTCTTGCCAATGGAGAATTAATGTTCCAGAAAGTAAAATCATATTGT
TGCATATTAAAGACTGGAACCAAAGACATCATACTGCTGGCTTGCTCGAA
GAGCATGTGCAAGTTacatctcaaaaagaaaattcaataaTATGGGATTC
GTACGGGGAAGATTCGGTTCCACCAGAAGCCTTACTAATTCCAAGCAACC
AAGGTGTTATCAACTGGATTGCTGACTCAAACGATAGTGTTAGGCCCTAT
CTACATTTCAGAGCATTTTATGAAGCCGTATTACCTACAACAAATGGTGA
ATGTTTTAGTATAGCAGATAAAGAGTTTTTTATGTGTTATGATGAGACGT
ATATAGACTGTACCAAACGATGTAACGGTGTTGCAGATTGTGAGGCCGGT
AATGATGAAAAAGACTGTCCTACAAGCGGAGTACGTCGTAGCTTTGGTCC
GACTCCTCGTCAAGAACAGTTTGAAGCAGAAAGCCCACAACAACTTGATA
AGCGTAATGGAATCAAGAGCTATGTCGTGTTGTGGCTGTCTGCCATAGGA
CTTTCTATTTTAGTGATCATTTCAATCATAGCGATTGATCATGTTTTGAA
GAAATCTCAAGCGCGCCCAGTCAAAAATATCGAACCACCTCCACCGCCTT
ATCAAGAATTTACAGAACAAGAGCATAGTGGATATTCGTTTAACTCTACC
AACATACAATCGCCTCCACATCCACCGCCCTACGAGTCAACATTATCGTA
TGGCGGGGATGACACAACTTTACCGGGTACCGAAAGAAACGATGAACTTA
TGTCTAGAGCTTATAGCGTCCCatttaatttacaaaattcACAAAACTCA
ACGGACGTTGGCTCAAGTGAGTCATTATACAGACCACGTCATCACAGTAC
ACCTTTTGGAGCGTATTATTCTTCGACTTCCACACTTGGATCTAGTGAAT
CGTTACCACGTGGTCGCTTTAATTATTTGTCATCATCAGATGGATCCAGT
GAGTCATTATCACGtgttttaaacaatagaacGAATACACCAATCGCAGC
GCTTTTTCATGATACAGATGTTATCGAGAGTACGACAACGTGCACGACTA
TCACACCTGTTCAATTTTTTAGATATTCAGATTCCCAAGAGAATCATGAA
GAATTTTTACAACAAATTGGAATCTTCAAGGAACCTGAGGCTTAG Coding sequence (CDS) from alignment at sc0000044_pilon:1800909..1803053+ >XLOC_045420 ID=XLOC_045420|Name=XLOC_045420|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4290bp|location=Sequence derived from alignment at sc0000044_pilon:1800909..1803053+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATTCAACTTTCACCATATTAGCTTTATTTGCATGTCTGGATATCGC
ATATTCAGTTACTTTAGCCCCAGATTcatttaaaatacaaagttattttg
atataaaaaatacTCACGAAATTTACCAAAGGGCTAATATTCGAACAAAT
GGAAAAGGACATAACTATAAATTTGTGAATCAAAGTTTCGGAGTTTTAAC
AAGCCCAGGATATCCTGTTCCATTTCCTGGCAACACAACTACAAAATGGC
GGATTGAAATGCAAGATGGTTCCCGCATTGTCTTGATGATTCGACAGTTT
TTCTTTGGGCCTGGTGATGAGTTAGAAATTTACAACTATAAAAATGAAGA
GACTCAACTGTACACATCCCAAAAACCACCAAACGATCTTATATTTTTGA
CTTCAGATGCGTTGGACATAACATTAAGAACTTCTTCGTCAGACATATCC
GATTTGATCAATATGACTGGAAGGCATGGTTCAAAACAACGGTTGTTTTA
CGCCATGTTCGAGCGAGAAGGATGTGGGGGTGTTTTGACTCGATCACACG
GATACATaaacattccattttatatacaCGAAACCAAAAGACCTCACGAA
TGTTTATGGACTATCGAGGCTGATGATGATCATGTGATCACTTTAGAATT
CTTGGACTTTGAACTCGCACCAGGCTCCTGTATTTACAACAATATTTACG
TACGTGATGGTGATTTTGATGGGGGTTACTCTCTAGGAGATTTCTGTGAA
GAAAATCCACCTTTTAGTAAGCTAAGGTCTGTTAGAAATACAATGTCGAT
TGTTTATAGAGTACGACCGAATCTCTACGAAGGAGAACATAACCAATTAC
CTAATATTAAAATGTTCTATCGGATGGTCGATAGCTGCGGTGGAGATCTT
GAAGGTTATTCAGGGAACTTCGAAACACCAACATACTGGCATAATGAGAA
ATATTCTTGCCAATGGAGAATTAATGTTCCAGAAAGTAAAATCATATTGT
TGCATATTAAAGACTGGAACCAAAGACATCATACTGCTGGCTTGCTCGAA
GAGCATGTGCAAGTTacatctcaaaaagaaaattcaataaTATGGGATTC
GTACGGGGAAGATTCGGTTCCACCAGAAGCCTTACTAATTCCAAGCAACC
AAGGTGTTATCAACTGGATTGCTGACTCAAACGATAGTGTTAGGCCCTAT
CTACATTTCAGAGCATTTTATGAAGCCGTATTACCTACAACAAATGGTGA
ATGTTTTAGTATAGCAGATAAAGAGTTTTTTATGTGTTATGATGAGACGT
ATATAGACTGTACCAAACGATGTAACGGTGTTGCAGATTGTGAGGCCGGT
AATGATGAAAAAGACTGTCCTACAAGCGGAGTACGTCGTAGCTTTGGTCC
GACTCCTCGTCAAGAACAGTTTGAAGCAGAAAGCCCACAACAACTTGATA
AGCGTAATGGAATCAAGAGCTATGTCGTGTTGTGGCTGTCTGCCATAGGA
CTTTCTATTTTAGTGATCATTTCAATCATAGCGATTGATCATGTTTTGAA
GAAATCTCAAGCGCGCCCAGTCAAAAATATCGAACCACCTCCACCGCCTT
ATCAAGAATTTACAGAACAAGAGCATAGTGGATATTCGTTTAACTCTACC
AACATACAATCGCCTCCACATCCACCGCCCTACGAGTCAACATTATCGTA
TGGCGGGGATGACACAACTTTACCGGGTACCGAAAGAAACGATGAACTTA
TGTCTAGAGCTTATAGCGTCCCatttaatttacaaaattcACAAAACTCA
ACGGACGTTGGCTCAAGTGAGTCATTATACAGACCACGTCATCACAGTAC
ACCTTTTGGAGCGTATTATTCTTCGACTTCCACACTTGGATCTAGTGAAT
CGTTACCACGTGGTCGCTTTAATTATTTGTCATCATCAGATGGATCCAGT
GAGTCATTATCACGtgttttaaacaatagaacGAATACACCAATCGCAGC
GCTTTTTCATGATACAGATGTTATCGAGAGTACGACAACGTGCACGACTA
TCACACCTGTTCAATTTTTTAGATATTCAGATTCCCAAGAGAATCATGAA
GAATTTTTACAACAAATTGGAATCTTCAAGGAACCTGAGGCTTAGATGCA
TTCAACTTTCACCATATTAGCTTTATTTGCATGTCTGGATATCGCATATT
CAGTTACTTTAGCCCCAGATTcatttaaaatacaaagttattttgatata
aaaaatacTCACGAAATTTACCAAAGGGCTAATATTCGAACAAATGGAAA
AGGACATAACTATAAATTTGTGAATCAAAGTTTCGGAGTTTTAACAAGCC
CAGGATATCCTGTTCCATTTCCTGGCAACACAACTACAAAATGGCGGATT
GAAATGCAAGATGGTTCCCGCATTGTCTTGATGATTCGACAGTTTTTCTT
TGGGCCTGGTGATGAGTTAGAAATTTACAACTATAAAAATGAAGAGACTC
AACTGTACACATCCCAAAAACCACCAAACGATCTTATATTTTTGACTTCA
GATGCGTTGGACATAACATTAAGAACTTCTTCGTCAGACATATCCGATTT
GATCAATATGACTGGAAGGCATGGTTCAAAACAACGGTTGTTTTACGCCA
TGTTCGAGCGAGAAGGATGTGGGGGTGTTTTGACTCGATCACACGGATAC
ATaaacattccattttatatacaCGAAACCAAAAGACCTCACGAATGTTT
ATGGACTATCGAGGCTGATGATGATCATGTGATCACTTTAGAATTCTTGG
ACTTTGAACTCGCACCAGGCTCCTGTATTTACAACAATATTTACGTACGT
GATGGTGATTTTGATGGGGGTTACTCTCTAGGAGATTTCTGTGAAGAAAA
TCCACCTTTTAGTAAGCTAAGGTCTGTTAGAAATACAATGTCGATTGTTT
ATAGAGTACGACCGAATCTCTACGAAGGAGAACATAACCAATTACCTAAT
ATTAAAATGTTCTATCGGATGGTCGATAGCTGCGGTGGAGATCTTGAAGG
TTATTCAGGGAACTTCGAAACACCAACATACTGGCATAATGAGAAATATT
CTTGCCAATGGAGAATTAATGTTCCAGAAAGTAAAATCATATTGTTGCAT
ATTAAAGACTGGAACCAAAGACATCATACTGCTGGCTTGCTCGAAGAGCA
TGTGCAAGTTacatctcaaaaagaaaattcaataaTATGGGATTCGTACG
GGGAAGATTCGGTTCCACCAGAAGCCTTACTAATTCCAAGCAACCAAGGT
GTTATCAACTGGATTGCTGACTCAAACGATAGTGTTAGGCCCTATCTACA
TTTCAGAGCATTTTATGAAGCCGTATTACCTACAACAAATGGTGAATGTT
TTAGTATAGCAGATAAAGAGTTTTTTATGTGTTATGATGAGACGTATATA
GACTGTACCAAACGATGTAACGGTGTTGCAGATTGTGAGGCCGGTAATGA
TGAAAAAGACTGTCCTACAAGCGGAGTACGTCGTAGCTTTGGTCCGACTC
CTCGTCAAGAACAGTTTGAAGCAGAAAGCCCACAACAACTTGATAAGCGT
AATGGAATCAAGAGCTATGTCGTGTTGTGGCTGTCTGCCATAGGACTTTC
TATTTTAGTGATCATTTCAATCATAGCGATTGATCATGTTTTGAAGAAAT
CTCAAGCGCGCCCAGTCAAAAATATCGAACCACCTCCACCGCCTTATCAA
GAATTTACAGAACAAGAGCATAGTGGATATTCGTTTAACTCTACCAACAT
ACAATCGCCTCCACATCCACCGCCCTACGAGTCAACATTATCGTATGGCG
GGGATGACACAACTTTACCGGGTACCGAAAGAAACGATGAACTTATGTCT
AGAGCTTATAGCGTCCCatttaatttacaaaattcACAAAACTCAACGGA
CGTTGGCTCAAGTGAGTCATTATACAGACCACGTCATCACAGTACACCTT
TTGGAGCGTATTATTCTTCGACTTCCACACTTGGATCTAGTGAATCGTTA
CCACGTGGTCGCTTTAATTATTTGTCATCATCAGATGGATCCAGTGAGTC
ATTATCACGtgttttaaacaatagaacGAATACACCAATCGCAGCGCTTT
TTCATGATACAGATGTTATCGAGAGTACGACAACGTGCACGACTATCACA
CCTGTTCAATTTTTTAGATATTCAGATTCCCAAGAGAATCATGAAGAATT
TTTACAACAAATTGGAATCTTCAAGGAACCTGAGGCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1800909..1803053 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2145:1 |
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