|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000429_pilon:4836..8944+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045415 ID=XLOC_045415|Name=XLOC_045415|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4109bp|location=Sequence derived from alignment at sc0000429_pilon:4836..8944+ (Clytia hemisphaerica_ch_hm2_pilon)
atgcaGGACCCAAGTGCTGATACTGAGTGGAATGATGCTTTACGAAGACA
TGGTATTATACCAGAGAAAAAGAAGGAAGCAGAAATAACTGAAGATGAAa
tcatcaaaatggtagatgCAGCTGTGAAAGCTAAAACAGGAGAAAAAGAT
GTGAATGTAAGTAAATAGACATTTCCTTTcgattcttttttatatttttt
tgatgatAGTTTTTacaagaaatggaaaaaaactttAGAATTGCCTGACC
CAACTATGAAAATGAATAGGTTCAactatcaaaactttttaaagtttatt
gAATCTCCTAGTCCTAAACTATGAGATTTCTGGGCCTACCTGACggaatt
ttcttgaattttctccttattttttcctactttcttgtttatttttctgt
tgATTAGCCAGGTATGTCCTTAAAAGTATCACTTATTACATAATCGCTCA
ACTCTGACAGGCTCTAATAAACACGATTAGCAACAAACCATTACTTTTCT
TAGCTAGAAATTGACTTCctttatgttttaaatttccaaaCTTATTTACT
TTTATATTCTTTTCATTGATTGCAGGAGATGACTTTGGATGAATTAAACG
AAAAAGAGGATGAAGACTGGGACGATGACGGTCTCATTGAACAAATTAGG
TGAGAGAATGACCTTTATTTACCCTAGACAACGCTTCTTGACCCTGGTga
aacaaaatctttgatcaaagttttctaaaagtggtaccctattagtagca
ctactcaatgtgGGTGAAagaactttgaaacaaaaaatttcagtGAATTA
TAAATGGACACACATCGTCGAGTAGTGCTGACATTAGGGTAACACATTCA
AAATACTTGATCAGAGATGGctgatatagcttggtccaaaAGATATATAA
AGGTCCAGAAAGGTCAGTTGGTGTGAACGAAATGTCTTAAAAATCAGTTC
TATTTGTTGACTTACAATAATTCTTTTAGACAACGAATTATcaagaaaag
ttatttttcaatCCATCaacaaacaaaactaaaaattttaaattgagtac
ataactcagagtttcatgttTCCACGAAAAAGATAACTTTTCTTGATAAG
TATATGGCTCTGGTTACCCATCGAGCACTCTGACATCATCGCTTCGTCTA
ACCTTGATTAGACAACGAAACACTTATTTATACCTGTTTAAACTATTGTC
TACAGTATAATGTCTTCTTCCCTTTTTGCTGAGGGTGACTGGAGATTGTC
TAAATATAGAAATAAAACACACCAACACAACATTGGTTATGATATcattt
tggatttgttttacaGGCAACAAAGATTAGCAGAGATGAAAGTATTGCAA
GCTAAATCGAAATTTGGTGATGTTCGTGAAATTTCAGCTGTTGATTATGT
TGATGAGGTCAATAAAGCTGGAGACGATGTTTGGGTTGTATTGCATTTAT
ATAAATCTGGGTATCCTTTTCAAATGTAGatgcttttttatgagaaccaT
GCAATGATCTCTAACTACTTTATTGGGTCAGGCTACCCGTATCTTAGGAA
GAGTGTCCAGGTTTAAAGCTGACTAGTCCATCATCTCGTTTTCAATTCTG
gctgttaaaggttttgtttttaaaaataagagtaatatcgtttgcttact
catcaattttaattcacaagctttttcacattgacacggatgtggaggaa
gattgatcagaaagaggaaaacaaaaacattttttgcttatatcagcata
atataacaataagaagacactgtcctgatatgaaatatgtgtctgataag
aaacggaaacacttaaaAAGTTAACAGCGTGGTtcgaaagttttaaaatt
cgaacgttcgaaagtctaaggtaaaatagaaaacaacatAGTGGACTAGC
CGACTTCAAACTGGACATACTTccacagggctcgaaataacggtcggaca
tcggacattgtccgacccaattgctgaaatgtccgacccaaatcgattct
agtcggacatcatgtccgacccaattactttcggtgccttcaaaaaattt
gtcagatgcgttgtgaaatttccaaaagaaattataatttacatagaatt
agtaacttctttatttacacacaaaaactctcaaagttgcgatcattagt
gttagatattaattttgtgtgatgctttttctcaacaaatgaaagcattc
ttcaagtaaaaatcatgggcttctgaccattaattggcatttgtttagct
tcttcgtgaTCAATGTAAAATTCTATCAGAAGCTTGTATTATACTTGAAA
TATAcccacataaaaatcaatcggacatgtccgacccattttactttaaa
agccttaggacatgtccgacccaaatcaatttttgatcggacaatgtgtc
cgaccacctaaatatcgttatttcgagccctgctTCCAAATCTGTGAGCA
GTTAGCAGTTCTAGTGTGTGAAAGAATGTGATATCTGTGAAAAGAGCGAT
TGCAAGTTTTGGCTTGTCTTTGGCCAAACTTTTTTgacaagtttttcaaa
ataaagttaaTACTCAGGCTTCGAAAGGAGGCTTCTTAAAATCAATATCT
TGTTAGTTATCAATAGTGAGATAACGCTCCTGGAAATTGCTTTCTTGTTC
ACTTTGTCAAATTTAGACAAAAAGCCCAGATTTCGGGACCCTGTAACTAG
CCATCCGgttggaatttttcaaaaaaattttgacatgTTGCAACAATCAT
GGTTTTGACCAAAGTATTTGAGAATTAAGCAGTTCTGAGAATATCACTTC
CTGACCCTACCCATTCTTGTctatttttctcagaaaatggctcttaaggg
CAACAAATTCATTATAAGATTTTTCTCATATAAATTCTGCCCCTCTGTTT
TCCAGACGCACTTTTCCAAAACACTGTTGATTAAATTTGCTACGCAGTGT
ATCAACTGTCATATATTTGTGTTAATattcttcttaactttttattGCAT
TAACATTCGAAAAGAATTCCATTATGCGATGTAATTAATCACCATATCCA
AGCACTAGCAAGAAAATTTCCGAccaccaaattcttgaaaaGTGTATCAA
CAACATGTATTCCGAACTATCCAGACAAGAATTTGCCAACCATCTTCATT
TATTACGAAGGAGACATGAAAGGACAATTAGCTGGTCCATTGACTTTTGG
TGGAATGAGCTTGACTCAAAACGGTGAGCATAGTTTTGTTCTAAggattt
ttaataagaataactTTTCGTAATGTTCTTTAAAGAGCTCGTATGAACCT
ATCCTCATTACTTGAAGGTTAAAATCGAATTTTCCTATGACTTGAAATCT
GATTCTCAGATTGATCTTAATTTGGTCCTTCTTAAGATTTGGCTTGATTT
CAGTCAGCACCATGtacttatgaaattgttcttataaaaaaacgacgTTT
CGATAAAATAGTTAAAAATAGTCATACCAAAAGATTATTTCTTCTCTTAG
TAACACTGATAACTTAAAGCTATGCTTTATTTAAGGGAATAATAGTAAAT
ATAACcctatttttactactttgaccctaagatttttccaaaactttaag
CTATTTCAAGctgaacttttttttcttaaattttccttATTTAATTTGCC
GTTTTTCAGCCTCGGTGTCCTAATAAAAAGAATACTGTACAGTATTCAAG
ATATACACTACTAGAGAgccttccaagaattttcaaaaaattccacacaa
tacgtcactttttttattctttaagtgacgtattgggtggaaaattttaa
aagttctcgaGAGACTCTCCAGTGGTACATATCACGAATGCGTTATTTTA
GATCCTGAATGTCAATAGTAAGTTATTTCTTTATCTCTAAATATttcgct
caaattttttcaaattttcttgaacactttgtgattctatttatttcact
gtAGATCTTGAATGGAAACTATCGAAACTCGGTGCCGTCAAATCAACCAT
GAAATCAGATCCACGTGGAACGAATGTTGATGACAGTTCGGGATTCTCTA
TGCTATCTCGTTCATCGCGCACGCGCAAAGAATCCGTGTCTAGTGATGAT
GATTATTAG Coding sequence (CDS) from alignment at sc0000429_pilon:4836..8944+ >XLOC_045415 ID=XLOC_045415|Name=XLOC_045415|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000429_pilon:4836..8944+ (Clytia hemisphaerica_ch_hm2_pilon)
atgcaGGACCCAAGTGCTGATACTGAGTGGAATGATGCTTTACGAAGACA
TGGTATTATACCAGAGAAAAAGAAGGAAGCAGAAATAACTGAAGATGAAa
tcatcaaaatggtagatgCAGCTGTGAAAGCTAAAACAGGAGAAAAAGAT
GTGAATatgcaGGACCCAAGTGCTGATACTGAGTGGAATGATGCTTTACG
AAGACATGGTATTATACCAGAGAAAAAGAAGGAAGCAGAAATAACTGAAG
ATGAAatcatcaaaatggtagatgCAGCTGTGAAAGCTAAAACAGGAGAA
AAAGATGTGAATGAGATGACTTTGGATGAATTAAACGAAAAAGAGGATGA
AGACTGGGACGATGACGGTCTCATTGAACAAATTAGGAGATGACTTTGGA
TGAATTAAACGAAAAAGAGGATGAAGACTGGGACGATGACGGTCTCATTG
AACAAATTAGGCAACAAAGATTAGCAGAGATGAAAGTATTGCAAGCTAAA
TCGAAATTTGGTGATGTTCGTGAAATTTCAGCTGTTGATTATGTTGATGA
GGTCAATAAAGCTGGAGACGATGTTTGGGTTGTATTGCATTTATATAAAT
CTGGGCAACAAAGATTAGCAGAGATGAAAGTATTGCAAGCTAAATCGAAA
TTTGGTGATGTTCGTGAAATTTCAGCTGTTGATTATGTTGATGAGGTCAA
TAAAGCTGGAGACGATGTTTGGGTTGTATTGCATTTATATAAATCTGGAA
TTCCATTATGCGATGTAATTAATCACCATATCCAAGCACTAGCAAGAAAA
TTTCCGAccaccaaattcttgaaaaGTGTATCAACAACATGTATTCCGAA
CTATCCAGACAAGAATTTGCCAACCATCTTCATTTATTACGAAGGAGACA
TGAAAGGACAATTAGCTGGTCCATTGACTTTTGGTGGAATGAGCTTGACT
CAAAACGAATTCCATTATGCGATGTAATTAATCACCATATCCAAGCACTA
GCAAGAAAATTTCCGAccaccaaattcttgaaaaGTGTATCAACAACATG
TATTCCGAACTATCCAGACAAGAATTTGCCAACCATCTTCATTTATTACG
AAGGAGACATGAAAGGACAATTAGCTGGTCCATTGACTTTTGGTGGAATG
AGCTTGACTCAAAACGATCTTGAATGGAAACTATCGAAACTCGGTGCCGT
CAAATCAACCATGAAATCAGATCCACGTGGAACGAATGTTGATGACAGTT
CGGGATTCTCTATGCTATCTCGTTCATCGCGCACGCGCAAAGAATCCGTG
TCTAGTGATGATGATTATTAGATCTTGAATGGAAACTATCGAAACTCGGT
GCCGTCAAATCAACCATGAAATCAGATCCACGTGGAACGAATGTTGATGA
CAGTTCGGGATTCTCTATGCTATCTCGTTCATCGCGCACGCGCAAAGAAT
CCGTGTCTAGTGATGATGATTATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000429_pilon | genome | sc0000429_pilon:4836..8944 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 586-738:3957 |
| Aaloc | 376-582:3016 |
| Aaloc | 232-372:1318 |
| Aaloc | 157-228:576 |
| Aaloc | 1-156:1 |
|
