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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000429_pilon:39086..41879+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045413 ID=XLOC_045413|Name=XLOC_045413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2794bp|location=Sequence derived from alignment at sc0000429_pilon:39086..41879+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAGATTGTTGTTATACTGTTTGCATTATTGTGTTCTCATTGCAT
ATGGGCTGCTGATGGAGATGATCAGGAAACTGTGGATCGGATACCAGCTA
ACAATGATCACTTGCCACCCAATGTAGATCCATCATCAAGGATTTCATTT
GAATCACCAAAGATGTCAGATGAAGAGCAATTTTCAGCACACTTGCCAGA
CTCTTTTAAATGTGACGCATGTACAGCTATTGCTTTTcaggtgatttttt
ttttaaatcttgtgATACAATTTTGTATTGGattggtttcattttttatg
attttgctTCAGAACTTTTCCATCCGCTTTCCGCTTCTAAAAAACTGATG
AATGCATGCACGCATATATTTTAATCAttacatactctcgggtacttaat
agccccgtctccccgctaattaatttttccacccaggacattcttattcc
aacccccctgcttattaatttttgggaaaatatttttgaaagttccctct
tttgtcctaattcagctgtaacagcctccttttcaaaaattttccaccaa
ggaCATTTCTATTTGAACCCCCCtcacttattaagttttgagattttttc
caaccccgtCGCTTATTCgaatccccccggctattaggtacccaagagta
aaTGGAAGTGAGTCTTGTGATTCTAAAAAGAAATTAGATTTGAGCGTATT
CTTAAAAGAGGagcgttttttttaaattgatggCCAAAGCAgtctaaaat
ttaaaacatttctgaGGCTCAACATGATTCTAAAAATATcctaaaatttt
acaaatttgaacAGATTTTGACTTCTGACTTTCAGAATTAGAAGaactat
aatttttttacattttagcaTGGAATTCTGCTTTaaaaaaaaGGGTAGTA
ATATTTAAATATATTTGTTCTTTAATAAATCACCTTAATGAAGAGAGGGG
TTGTAAAAGTTGTATTGTTTTCAGCATGTTAAACCACAgatatataaaac
actagatagagctactctgtattttccaagcaatggcaggtgaagcaaaa
taatccgccatctttgctgaaagtagaccACAGTAGAAACCTTGGTTTTT
GACACTcaaatgacttcaaaatttgaagcaCCACATAGGctaaattgtga
cgtcacttcgTTCAAGATGGCGAATTACTTTGCTTCAATTAGTATCTAGT
GATTTATTTAAGATATTTGTGATTTCAACTCAATCAAACATTAATTTTTA
GATGGACAAACAGCTAACTCAtgcagaaaaaagtgacaaGCCGATGAAAG
AATCTGAATATCTGGATGTCTTTGACAAAGTCTGTGGACATGAAACCTAT
AAGAGGTAAATCTTTAATATTGTATGGTGGCTACTTCGAGATGATAAACA
ATTTTTACAACTAGAATATGCAATATTGCAAAATTATTTAGAATTTAGGA
ATGGAAACCTTTTCTTTTACTAAAATTCTGGTGCTCGGAATTATCTTAAC
AAAGTATGATTGATTGATACTTTTAAATCATTCGTTAGGGTGAAAAAGGC
TTGTAAATCGTagctttaaatcctaaatggtagttaaagggataatcaga
tggtttgtgaTATTTGGCTTGTGTAATCTTTCTACtgtcctgagcaaaac
ctcaaaatgtttttacctaaatattttccaaagtcgagatattttaaatt
acaagtttttgactttttgtaagaaaacaatagaatttcaacgtaagaac
tgTTTGAGAACCCATTTtcggaaatttcaaattgtgatatttCTTTAGAA
AATAGTTCGAACAAAAATACTTGGCGATTTTACTCAAAACCACAGAGGGt
ttcttcaggcaaaatatctcaaaccatctgattatccctttaacacTTAT
TGAATGTacttataaagtttttttatttatatttttctcctagaaaatat
attttctcctAGATCTCATTCCACTGATGATTGGTGCCTGAGCTCCATGA
AACTATGAGTTTGAAACatagatattgtgtcaactcttcATTATAAATTA
TTCATTTATTGAATGGACTTACAAcggatttttttattcatttttttctg
ctAGTTACGGATTGAAATCATTGAACGGTGTCAATCGAATCTCAGGAGAA
GGTCTGGAAGCGAATGAACATCCAGGAATGATGTATGGTGGTGGCAAATG
GCCTACAAGGTAAATCTATGTTTGACAGGCAATTTTCAATAAGAACAACA
GGCTGAAATTCGGCAAAACTTATCAAACATCTAAGAACAATTTGACTCCC
GAAGTTCAAATTATTACTAAATAATTAAATactgattttaaatattttaa
cctgagaatttcaaaaaaaaagaagaaaaatcgaGGCAAAACTAAAATCT
TACCTTTCTTAATTGTTGTCATATACTTCACAATTCTTAAGCTTTGATAA
AGAACGAGACAGACATAAAAGTTCTGATTTGAAGGAAGAAAGTTTGTTGA
AAATGGTAATGAATTTTTGGGTCGGTAGGTTTTTAGGTAGGTAGTCTAGC
CTAAGagtaaaaaaggttaaaaaacaaaaatgcactcgaaattttagttt
ttgtttcatttctttGCAGACTATCATCGAAATGTTTCGAGTTGATCGGT
GAACACGGTGAAGACGAGATTTATGACGCCTTTCGAAGTACTGATGATTT
CCATACGTTTCTTTGCAAAGAACTCACTACTGACtgcaagaaaatgaaga
agaagaataagaaaaagaagaagggaaagaagagtgaattgtaa Coding sequence (CDS) from alignment at sc0000429_pilon:39086..41879+ >XLOC_045413 ID=XLOC_045413|Name=XLOC_045413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1248bp|location=Sequence derived from alignment at sc0000429_pilon:39086..41879+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAGATTGTTGTTATACTGTTTGCATTATTGTGTTCTCATTGCAT
ATGGGCTGCTGATGGAGATGATCAGGAAACTGTGGATCGGATACCAGCTA
ACAATGATCACTTGCCACCCAATGTAGATCCATCATCAAGGATTTCATTT
GAATCACCAAAGATGTCAGATGAAGAGCAATTTTCAGCACACTTGCCAGA
CTCTTTTAAATGTGACGCATGTACAGCTATTGCTTTTcagATGGTCAAGA
TTGTTGTTATACTGTTTGCATTATTGTGTTCTCATTGCATATGGGCTGCT
GATGGAGATGATCAGGAAACTGTGGATCGGATACCAGCTAACAATGATCA
CTTGCCACCCAATGTAGATCCATCATCAAGGATTTCATTTGAATCACCAA
AGATGTCAGATGAAGAGCAATTTTCAGCACACTTGCCAGACTCTTTTAAA
TGTGACGCATGTACAGCTATTGCTTTTcagATGGACAAACAGCTAACTCA
tgcagaaaaaagtgacaaGCCGATGAAAGAATCTGAATATCTGGATGTCT
TTGACAAAGTCTGTGGACATGAAACCTATAAGAGATGGACAAACAGCTAA
CTCAtgcagaaaaaagtgacaaGCCGATGAAAGAATCTGAATATCTGGAT
GTCTTTGACAAAGTCTGTGGACATGAAACCTATAAGAGTTACGGATTGAA
ATCATTGAACGGTGTCAATCGAATCTCAGGAGAAGGTCTGGAAGCGAATG
AACATCCAGGAATGATGTATGGTGGTGGCAAATGGCCTACAAGTTACGGA
TTGAAATCATTGAACGGTGTCAATCGAATCTCAGGAGAAGGTCTGGAAGC
GAATGAACATCCAGGAATGATGTATGGTGGTGGCAAATGGCCTACAAGAC
TATCATCGAAATGTTTCGAGTTGATCGGTGAACACGGTGAAGACGAGATT
TATGACGCCTTTCGAAGTACTGATGATTTCCATACGTTTCTTTGCAAAGA
ACTCACTACTGACtgcaagaaaatgaagaagaagaataagaaaaagaaga
agggaaagaagagtgaattgtaaACTATCATCGAAATGTTTCGAGTTGAT
CGGTGAACACGGTGAAGACGAGATTTATGACGCCTTTCGAAGTACTGATG
ATTTCCATACGTTTCTTTGCAAAGAACTCACTACTGACtgcaagaaaatg
aagaagaagaataagaaaaagaagaagggaaagaagagtgaattgtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000429_pilon | genome | sc0000429_pilon:39086..41879 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 451-624:2621 |
| Aaloc | 346-447:2106 |
| Aaloc | 241-342:1252 |
| Aaloc | 1-240:1 |
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