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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1668299..1674515+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045408 ID=XLOC_045408|Name=XLOC_045408|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6217bp|location=Sequence derived from alignment at sc0000044_pilon:1668299..1674515+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACCCTGAGATCCGCAACGAGGTGGagttgaaaaaacaacgaagggA
AGAACAACGGATTGACGAACTGAAGAAAGCAGgaaagagtaaagaagaaa
tcgaagaagcattaagcaaatacaaaggcaaagagaaagagaagaaagaa
gTCATTGTTTGTCATACCGTTCAAGATGAACAGAAACGGAAATTGGACAG
ATTGATGAGTAACCCGGTACGTACAGCGTATCCCAAACTAGCGGACTAAT
TTTTCggtaaagtaaaatcctcattattcttgatatgcgtaagtcttttt
tctagcggaaactcCCTAAAAAAGACGGGATttgacccctctctgttact
aaaaatagaaacacggaggtcaaaaactgggtgcttccgttaaaaaatat
gacgtcatcttgacttacgcatatcaagaatttatgaaaaattgtaTACA
CTTGTATATAGCACTCTATACACTCTGTTGAGGAGCAATCTCTACTTCTC
CGTTCACTGCAAGTGATTATGTGAAACTCAACACTCAGTATTTTGAGCAC
TCTCTGGTGACAACAACAGTCTATACTCGCTTACCCAAGCTGCACTGACG
AGTTTTGTGAAGGGCAAAAACAGTTTTGTGAAGGACTGAAGGACAAAACA
CGCGTCTGCGAATAGATGACTTGTATACTTGatattttaatctcaaaaac
ctttaatcaatttgggaattgaatatatattgattgaacagagaattgCA
ATATTATTTACATCAAATTTGAAAAGCGCCTGTTAGTCGGTTATAAGAAT
TATAGAAGTTTTACACTTACAAATATATCTaggctgaaaaaatgaaacca
aATCAAAACATCGTCAAAGCATTTGTCCACTCTCTGAAATTTCAAGAGAT
TTCATAACGTcatcaattaaaaattttatgcCGAATATGTGAATTACCAA
TTTGACTTTGACTTGCCCAATTATTACAAGCTCACAACAAGGCTCTCCAG
aaaaaaaCCTCTATGCTCAtaataattaaaagttttgaaagcgCTAAAAG
CTTTACATTTAGCcaataagaaattttgaatcaatgataattttttcaat
ttacagAATAAAGAAGTTTACATTCCCCAACAACGCAAAGAATGGAAACC
TCGCGACCCGGCCGAGTTTGTGCGCCATGTTATGGGGTCCAGTGCTGGGG
CTGGGAGTGGCGAATTTCACGTGTATCGAAATATAAGGAAGCGGGAACTA
AAACGTCAAGAATACATGGAAAAGAAAACTATGAAGGTATGTTGAAAGGA
GTTACCGGCCTTGAATAGAGATGGGGACATTCCACAGATGTTGCCTagat
caaattcttttttacaaataaaattaacCAAGAAAGACTCCGATACATGT
TTTTTGAAAGATGGAAAAATAACCGAAAGTATTGACTTTGTATGATAATA
CCTTTGAATTTATTGACAGTTATCGGAAATTTTTAGACTTTTACACCTCG
TATTGCAAGAGTGACTCCTTGTTGAGTTAAAGGGCGATGAACTTTTTCCT
CATTTCTCCGGACTGgctcttttttataaaagccctcttaacattttaaa
atataaaaactatgCTTTTTTCATTCAGGAAGAGTTAGACGAagaatttc
aagcaaaaatggaGGCGAATAAAGAAAAGGCCGAAGATTCAACGAACAAG
AAGCGAGCTAAAAGGTAAATTTGATACTCTATCTCTTCCCAACGCTTCTT
ATTTTATGAGAATCTTACCCTATTCATCTGGCTCTtgttattcatgacgt
aatcttctATACGGAAACACCGaaaaaaaaccgggcgtttgccaccaatt
ttgaatttaaacaatgaactggtggcaaacgcccggtcttttcgtgtgtt
tccgtataaaagattacgtcatgaatatcaagaattcaaCGCGACGTAAG
TCAGATAGAGCTAACGATATTCCCAAGTAAATTAAATTATCTAAAGGTGT
TTTGAGCTGTGACAtcgcattttatttttattttaactaaaaaGAGCAAA
GTCGAATTCGAATGAATTTACAATGGAATATTTTAGCCTGAAAATAGATG
AAAGATGAAAATAGATCTTATTcattttgttttccttcttcAGGCAAcga
agaaaacagaaaaaggcAATGGCAAAGAAATCTAAGAAATCTGAAGGTAT
GAGTGGAAAATATATATCTGGATATTGTTtgatttttggctgaaaactga
TAATTCTTAAGGTGTAAAATTAGCAATTAGAGCGCCTTTCAATGTTCACC
AAAAACCAAACTTTTCGTTGTACCCTTTCTATATAATAGAAATACCCCAT
TTTGGTCAGCCCCCTTAAAAAGCGGGCCTACACTGCAcggagttgcccgt
cgttaagAAAATTCAagtcgcaagctcggtcgttgcTTGACCTCGGGTAA
TATTTCTCAGTACGGCCCTCACAAatcggtcattattgtattagagtAGG
GGTAGCGCAACCATCACAATTTAGCAGTGAACTGTTAAACTGAGGATGGT
TTGtcactactctgtaccagagtgtatctcacgtttatcgcttcgtagta
cactttgtgcgcattgtctgtttgataaaaaaattcccgtacggagacct
ctgcgatgaagtatgatttataaatagcaacacttctctcatcgtctccc
ctctctcaccaacactccatcgcagcggtaggttcgaaaaatctcaaatg
agaaaagacaatgacaacagaccctctacggcaatgaattttgaaattag
ccgtaaatGCTGGGTCTGAGTACAGGCAAGTTTGTCACGTGATCGTGGTA
AAATGATATGAATTATGAATCTTACGGTTCGTAAATCTACATTTTCATTT
TGGTGgagtcccagctggcacacaacgttgtgaacattagataaacgttg
tttgaaacaacgttgtgtgccagctggagtCGTTGCAAAAGCGTGAGGGT
TTGGTTGAAAAGGTTTTGACTATCGTTTATAAAGCAGCCTTACCATTAAA
ctcatgaaaaaaaagtttgtgggATAAAAACATATAATAATTCGAATTTC
GCAAAGTCAGTAAAAACATGAAGTAAATTAGAGGGGCGCGAAAATTAAGG
GAACTtaaggtacacgcttttttaaataagaatggtGCTTTTCCATTtca
acatgaatatttttcacttttttaagaaaaatcatcTTTAGATATTCTTA
AGGCATCCAAGCTAACATGTAAAACATACTTCAACAAAAATATGGCATTT
TTCTGGAAGTCTTGGAGATAATTGACAATTTTAGGTTCAGGATTTTTAAT
GGtgatattctttatttttttggccaatATCATCATATTCTTCTATTCCA
TAGAGtacattctcataaaaaagcactaaggcgaaaataaaacaagaagc
ccgttaggcgtgaaggcccagcaaaagcgtAATTTacgcgatttccaaaa
attccaaaaaatgtttaacaagatttcaggaaagggatgtccaaaggatt
taaaattttactgcgtcgagcaaaataaaatgaaaaataattcgacaagg
ataattctccctttcttcatttcttagaacagggaagtgaaaaaataaac
gaaacataatgtacagtagtcaatcaaaaataaattgaatgttgaaagct
cgaaactttctacccgaaggtaaacaatcaaattcaaaatatcattaaat
tcaacttccataagaaacaacatcattgcatgaaaaaagttctaatcttg
ttcaaatttacacatgagctgcattttagtctacatttaccatgtccata
ttccatttaaaattagtatttataataattctgtgtcgagtttgaaaaaa
atcaagccGCCAATTCGTAAAACACAACAGATCCAGAAACAACCATATTC
Acatgtagcatcatggaaaaaggttccaatcttgttcaaatttacacatg
agctgcagctttagtctccattgccatattccatttaatcggtatttgaa
taattctgtgtcgggtttgaaaaatcagccaccaattcgttgaacgagac
agatctagaaatataaaaccattttcacacgtagcatcatgaaaaaagtt
ccaatcttgttcaaatttacacatgagctgcagtttagtctccattgcca
tattccatttaatcggtatttgaaatattctgtgtcgagtttgaaaaatc
aagccaccaattcgttgaacgagacagatcttagaaatatataaccattt
tccacacgtagcatcatgaaaaagttccaatcttgttcaaatttacacat
gagctgcagtttagtctccattgccatattccatttaatcggtatttgaa
ataattctgtgtcgagtttgaaaaatcaagccaccaattcgttgaacgag
acagatctagaaatatataaccattttcacacgtagcatcatggaaaaag
ttcctatcttgttcaaatttacacatgagctgcagtttagtcctccattg
ccatattccatttaattggtaattgaaataattctgtgtcgagtttgaaa
aatcaaagccaccaattcgttgaacgagacagatctagaaatatataacc
attttttcacacgtagcatcatggaaaaagttccaatcttgttcaaattt
acacatgagctgcatcttagtctccattgcaatattccatttaatcggta
tttgaaataattccgtgtcgagtttgaaaaatcaagccaccaattcgtta
aacgagacagacttagaaatatataaccattttcacacgtagcatcatgg
aaaaagttccaatcttgttcaaatttacacatgggctgcattttagtctc
cattgccatattccatttaatatcggtatttgaaataattccgtgttgag
tttgaaaaatcaagccaccaattcgttaaacgagacagatctagaaataa
ccattttcacacgtagtatgattgaaaaagttccaatcttgctataatag
acgatatcggcttaaccgaattctccccgaatgattacccatgatgcatt
gcgcaaaaaaaatcacgaacGATAACCCTTACCctaacaatgcatcatgg
gtaatcattcggggagaattcggaaagccgatatcgtctatttacacatg
aactccattttagtgttcatcagcaaattccagaatcaagtctttttgaa
aacaagaaactaaaagtgaaagtcagaaattgatttaaggtatagaattt
tcactcagaaagctttatgaaaactataacatatgacagaatgttgaaaa
agtttacaaaaaaaaatcactacaaagtttctttggtttgaaagtctctt
gaccactaaagcaaagaaaatgttcaagaaagtaagaatcaacacatgaa
atcaatctcctcgcttcaaccgccatcttgtatctgttttgttttgaaaa
cgtttgttgtttaaggagcgcgaaatcagaaaatatatcttttttagcca
gtacccgactttcgcaagcttttccctctccagacggcaaaaagtgtgtt
actggtataaagcgccgtttctaccaaaacggacacacagaaggaaacac
ggaaaaaaaatagtgacactctctttaaaggcccactcgctagcgctggg
ccaaaaatgtACTgcttccggaaaccggccgggtgataAAAAGATTGTTC
TGATCCGGCTGCAGACTATGGtttcatctatatggttcatcataaagatt
TTCTTGTTGACCGTGGATTGTTGAAGCTATCAAatgtcgtttggttagat
attcccgcttgtaaatcaagttttgttttttagtaGTTgctacattagta
ttcagggcttacttcatatgtttgtacataaaagttatctttaaagtttt
tcaatttcaatgatcttaagttatcaaaaatagcaacaacaaaaaaaaat
ttccggccggccgcatgagaatTTTTTCCCTTCACCCGCATTCTGGAAAc
actatattttttaatttttgcctaattttgtttttctttaagcAGATCAA
Caagagaaagaacaagcggatagtgacgaagaaaaaagcgatcaagaaag
tgaagaagaagaagaagaaaacaacaaagaaccagaagaacCTCATTTCA
TCATTGGTGGAAAATGA Coding sequence (CDS) from alignment at sc0000044_pilon:1668299..1674515+ >XLOC_045408 ID=XLOC_045408|Name=XLOC_045408|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1314bp|location=Sequence derived from alignment at sc0000044_pilon:1668299..1674515+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACCCTGAGATCCGCAACGAGGTGGagttgaaaaaacaacgaagggA
AGAACAACGGATTGACGAACTGAAGAAAGCAGgaaagagtaaagaagaaa
tcgaagaagcattaagcaaatacaaaggcaaagagaaagagaagaaagaa
gTCATTGTTTGTCATACCGTTCAAGATGAACAGAAACGGAAATTGGACAG
ATTGATGAGTAACCCGATGAACCCTGAGATCCGCAACGAGGTGGagttga
aaaaacaacgaagggAAGAACAACGGATTGACGAACTGAAGAAAGCAGga
aagagtaaagaagaaatcgaagaagcattaagcaaatacaaaggcaaaga
gaaagagaagaaagaagTCATTGTTTGTCATACCGTTCAAGATGAACAGA
AACGGAAATTGGACAGATTGATGAGTAACCCGAATAAAGAAGTTTACATT
CCCCAACAACGCAAAGAATGGAAACCTCGCGACCCGGCCGAGTTTGTGCG
CCATGTTATGGGGTCCAGTGCTGGGGCTGGGAGTGGCGAATTTCACGTGT
ATCGAAATATAAGGAAGCGGGAACTAAAACGTCAAGAATACATGGAAAAG
AAAACTATGAAGAATAAAGAAGTTTACATTCCCCAACAACGCAAAGAATG
GAAACCTCGCGACCCGGCCGAGTTTGTGCGCCATGTTATGGGGTCCAGTG
CTGGGGCTGGGAGTGGCGAATTTCACGTGTATCGAAATATAAGGAAGCGG
GAACTAAAACGTCAAGAATACATGGAAAAGAAAACTATGAAGGAAGAGTT
AGACGAagaatttcaagcaaaaatggaGGCGAATAAAGAAAAGGCCGAAG
ATTCAACGAACAAGAAGCGAGCTAAAAGGAAGAGTTAGACGAagaatttc
aagcaaaaatggaGGCGAATAAAGAAAAGGCCGAAGATTCAACGAACAAG
AAGCGAGCTAAAAGGCAAcgaagaaaacagaaaaaggcAATGGCAAAGAA
ATCTAAGAAATCTGAAGGCAAcgaagaaaacagaaaaaggcAATGGCAAA
GAAATCTAAGAAATCTGAAGATCAACaagagaaagaacaagcggatagtg
acgaagaaaaaagcgatcaagaaagtgaagaagaagaagaagaaaacaac
aaagaaccagaagaacCTCATTTCATCATTGGTGGAAAATGAATCAACaa
gagaaagaacaagcggatagtgacgaagaaaaaagcgatcaagaaagtga
agaagaagaagaagaaaacaacaaagaaccagaagaacCTCATTTCATCA
TTGGTGGAAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1668299..1674515 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 598-660:6155 |
| Aaloc | 544-597:6098 |
| Aaloc | 490-540:2145 |
| Aaloc | 403-486:1629 |
| Aaloc | 223-402:1107 |
| Aaloc | 7-222:1 |
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