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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:563963..566805- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045378 ID=XLOC_045378|Name=XLOC_045378|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2843bp|location=Sequence derived from alignment at sc0000041_pilon:563963..566805- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCGGTTGAACACTGGAAGCAAAGAATTGCTAAAGATTGCCTTCGT
AGTATTTGCAATGATAGTGATGTACCACGAAGTCTTTCATTCGAACGCCG
GTAAGTTGGTATTTGTGTCCAGAAGGCTTGTGTCTCTTTTTATTGTTAAA
AGATCTTACGTACCGAAATCGCAAAAATTTTGATCATGTGATTAGAAAAT
AGAGCAATCCAAAGAGGACATTTTGGTAACGTGATAAAAAGTATGCAAAT
CGCAACTTTTCTTTTGTTTGTAACAAAAGAAAATTGAACAAAAAGCTAAA
ACAATACAGGTGCCAGACCGGAGTTTTTATAATGACTATGCTTTTACAGT
GAAGCCTCTATTGATCTTTATAGTATAGCTCGAGTAGGTTGTCTGGTCCC
TTAAGTTAGCAATTACACCCCCTTCTCACAGACCCACTGGGACCCCTTCC
CACTGGAAAAATTAGCCAAAATGTCATCATTGAAAATAATCAAATAAACC
AATCCTTAATGGAAAATATTTACCATTTTTCCCATCCCCAATGAATGAAA
GAATCCTACCAGGACTTTGGGAAGAGGGTGTGCAACCAAGTATAGAATAT
GTAACAAATATTCTTCATCCAACTCTCCACGCCTGTTTAACCATGAATTT
AAAGCCATTTTTTTCAAAAAGTCTTAATGTTAATGTTCTTGATTTAGATG
AAATCTAAATTAGATTATAACATCATTTGCAATTTCGCTTGTTATATTGG
TTGCTTGCTGCAAAGCATAGGCGTAGCGAGATACCCTGCAAAATTTACCG
ATGAGAGCGGTTTTTACGACACTGTTATTGTCTTTGTTTTATCAAAAGGT
AATAAATATGTCATAAACGTCTGCACTCCCTCGTAAGTTTTGCAGGGTAT
CTCGCTACGCCTATGCAAAGCAATCACATTGAAAATCAGGATCAAAATAA
ACATAACACAAGAAACGGGAAATAACGCCCATTCTGTTGCGAGCCACTTA
ATTGAGGAATTTGTTCCAATCCTTAATGATTTGCTATTAGATTAAGGTCT
ATTTTCGTGTTGTCATTTTGATAAACTCGAAAGAATTCCAAAGATTTCAA
AATTCTTTGATATTTAGCTCAATCGTCACATACTCTTAGGTTCCAAATAA
ACAGGCCCTCCCCCGCTTGTTAATTTTTCGAAAATTTTCCAACCTCCCGG
ACCTTATTAGTACCCCCCGGTTATTAATTCTTAAGAATGTTTCTGCTGTT
AAGAGAAGTCAGAAAATCAGAAAAAGCCCCTTATTTTGCTCTGAATAGCC
TGATTTTACCTAATTTTTGGTTTTACAGAAGTACAAGGTAATTAGGGCAA
TTAGGTCCCAACGTTTATCAAAATCTCGAAAATCTTCCAACCCCCCCCCC
CCCGTTTACTCGCCCCCCCCTTCACTCGACCCCCCCCCGAACCTAAGAGT
AATGAAGTCTTTATAATATATTTCAGTATCAAAAGTGTTAACCAACAAAC
GTGACACAGTTACAGTTGCCGTTATCGAAGAAGAACAGAGAGTTCAAATC
TCACTCCCAAAGAATTCTGCAAAAGCTGCACAACTGAAAGAAAGTATTAA
ACAAATACTTAAAAATCTAAACCAGCAAAAATTGATCCTGTCAACAAATA
AAAAAGTGAATGTGAAAATGGTCAAAACACCGAAAGCTCCAAGCACAACG
ACAACAACGGAAGTACAGAAAACGATGAAAATACCGAAAACGACGAAATT
ACCGACGACGAAGAAATTACCGACAACAACTAAAACTCCGACCACATCTC
GGGATTACCTCGGTGTAATTTCATACATCCCAAATTCCGAATCTCACGCC
AGACAATATTTGGCTTTCGCATATGCATCATGGAGACATATCACAGACAA
AGAGGAGAAACTTTTAGACAAAAACATTACAAATGAGTTGCGCAATAGCA
TTGATCTTCTTGCATTCTGTCACCCTAATATTTGTCCCCACCTTGAGCAA
TTCTGCACTAAAATCACCAACATCTCAAAAGTCCATAATGCTGTCAAACA
AAAATGCTGGGCCGTTGAACAACCCTTTGAGACGGATATCCGGTACGGCC
CGCTAAACTCATACATCATGTTTAAGAGAAGAGACGTCACTGAATTATCA
AAGAAGTATAAATATCTTCTCCGCACGGATAACGATGTTTTTATAAGCCC
TGCTTTGATTTTATTAAAACCAACCAAATTCTTGTTCGGCAATGGAGGTT
ATAGTGATCCCTTCAATATGAAACGATTGAAAGAAGTTTCTAAGCGACTT
GGAATGATCCATCGTGGACGACACGGTATCGGATCAACTTGGTGCGCCGA
AACAAAACAGTTTATCATGATAGCCAATAAAACTTACGATACAGCCCGCT
ATGTTTGGTTGAACGAATTCAATCCAAAGGCTCAAGGCTTAGAAACCATC
AATTTTACTAAGAATATCGAGGGTGAATGGATCCGCTGGTGGAGACCAGT
TTCTTCAATGTATGGGGCAGAAATAGCGATCAACCACATGCTACCACAAA
TTTCCGACCAAAATCTAGGAAGATTCGATGATTCCTCATGCTCAACAAAA
AGCATTTGGGAAGCATATCATATTCATTGCTGGCATAGTCCTTGTCATTT
CTCAAAATTCGAATTCGATAATTTCATAAATAACCTTTTACATGGTACGA
AAGATTTGAGCAATAAATTGAGTAAAGAACTGGTGAGAAACAGTTATGAC
AAAGACACCAGAAATATGACAATGCAACAATTTTCTTCTTATATCGCTTA
TAATGCTATTGGAAAATATTTGGGAAGATATTTCCAGAATTGA Coding sequence (CDS) from alignment at sc0000041_pilon:563963..566805- >XLOC_045378 ID=XLOC_045378|Name=XLOC_045378|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2934bp|location=Sequence derived from alignment at sc0000041_pilon:563963..566805- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCGGTTGAACACTGGAAGCAAAGAATTGCTAAAGATTGCCTTCGT
AGTATTTGCAATGATAGTGATGTACCACGAAGTCTTTCATTCGAACGCCG
ATGTATCGGTTGAACACTGGAAGCAAAGAATTGCTAAAGATTGCCTTCGT
AGTATTTGCAATGATAGTGATGTACCACGAAGTCTTTCATTCGAACGCCG
TATCAAAAGTGTTAACCAACAAACGTGACACAGTTACAGTTGCCGTTATC
GAAGAAGAACAGAGAGTTCAAATCTCACTCCCAAAGAATTCTGCAAAAGC
TGCACAACTGAAAGAAAGTATTAAACAAATACTTAAAAATCTAAACCAGC
AAAAATTGATCCTGTCAACAAATAAAAAAGTGAATGTGAAAATGGTCAAA
ACACCGAAAGCTCCAAGCACAACGACAACAACGGAAGTACAGAAAACGAT
GAAAATACCGAAAACGACGAAATTACCGACGACGAAGAAATTACCGACAA
CAACTAAAACTCCGACCACATCTCGGGATTACCTCGGTGTAATTTCATAC
ATCCCAAATTCCGAATCTCACGCCAGACAATATTTGGCTTTCGCATATGC
ATCATGGAGACATATCACAGACAAAGAGGAGAAACTTTTAGACAAAAACA
TTACAAATGAGTTGCGCAATAGCATTGATCTTCTTGCATTCTGTCACCCT
AATATTTGTCCCCACCTTGAGCAATTCTGCACTAAAATCACCAACATCTC
AAAAGTCCATAATGCTGTCAAACAAAAATGCTGGGCCGTTGAACAACCCT
TTGAGACGGATATCCGGTACGGCCCGCTAAACTCATACATCATGTTTAAG
AGAAGAGACGTCACTGAATTATCAAAGAAGTATAAATATCTTCTCCGCAC
GGATAACGATGTTTTTATAAGCCCTGCTTTGATTTTATTAAAACCAACCA
AATTCTTGTTCGGCAATGGAGGTTATAGTGATCCCTTCAATATGAAACGA
TTGAAAGAAGTTTCTAAGCGACTTGGAATGATCCATCGTGGACGACACGG
TATCGGATCAACTTGGTGCGCCGAAACAAAACAGTTTATCATGATAGCCA
ATAAAACTTACGATACAGCCCGCTATGTTTGGTTGAACGAATTCAATCCA
AAGGCTCAAGGCTTAGAAACCATCAATTTTACTAAGAATATCGAGGGTGA
ATGGATCCGCTGGTGGAGACCAGTTTCTTCAATGTATGGGGCAGAAATAG
CGATCAACCACATGCTACCACAAATTTCCGACCAAAATCTAGGAAGATTC
GATGATTCCTCATGCTCAACAAAAAGCATTTGGGAAGCATATCATATTCA
TTGCTGGCATAGTCCTTGTCATTTCTCAAAATTCGAATTCGATAATTTCA
TAAATAACCTTTTACATGGTACGAAAGATTTGAGCAATAAATTGAGTAAA
GAACTGGTGAGAAACAGTTATGACAAAGACACCAGAAATATGACAATGCA
ACAATTTTCTTCTTATATCGCTTATAATGCTATTGGAAAATATTTGGGAA
GATATTTCCAGAATTGATATCAAAAGTGTTAACCAACAAACGTGACACAG
TTACAGTTGCCGTTATCGAAGAAGAACAGAGAGTTCAAATCTCACTCCCA
AAGAATTCTGCAAAAGCTGCACAACTGAAAGAAAGTATTAAACAAATACT
TAAAAATCTAAACCAGCAAAAATTGATCCTGTCAACAAATAAAAAAGTGA
ATGTGAAAATGGTCAAAACACCGAAAGCTCCAAGCACAACGACAACAACG
GAAGTACAGAAAACGATGAAAATACCGAAAACGACGAAATTACCGACGAC
GAAGAAATTACCGACAACAACTAAAACTCCGACCACATCTCGGGATTACC
TCGGTGTAATTTCATACATCCCAAATTCCGAATCTCACGCCAGACAATAT
TTGGCTTTCGCATATGCATCATGGAGACATATCACAGACAAAGAGGAGAA
ACTTTTAGACAAAAACATTACAAATGAGTTGCGCAATAGCATTGATCTTC
TTGCATTCTGTCACCCTAATATTTGTCCCCACCTTGAGCAATTCTGCACT
AAAATCACCAACATCTCAAAAGTCCATAATGCTGTCAAACAAAAATGCTG
GGCCGTTGAACAACCCTTTGAGACGGATATCCGGTACGGCCCGCTAAACT
CATACATCATGTTTAAGAGAAGAGACGTCACTGAATTATCAAAGAAGTAT
AAATATCTTCTCCGCACGGATAACGATGTTTTTATAAGCCCTGCTTTGAT
TTTATTAAAACCAACCAAATTCTTGTTCGGCAATGGAGGTTATAGTGATC
CCTTCAATATGAAACGATTGAAAGAAGTTTCTAAGCGACTTGGAATGATC
CATCGTGGACGACACGGTATCGGATCAACTTGGTGCGCCGAAACAAAACA
GTTTATCATGATAGCCAATAAAACTTACGATACAGCCCGCTATGTTTGGT
TGAACGAATTCAATCCAAAGGCTCAAGGCTTAGAAACCATCAATTTTACT
AAGAATATCGAGGGTGAATGGATCCGCTGGTGGAGACCAGTTTCTTCAAT
GTATGGGGCAGAAATAGCGATCAACCACATGCTACCACAAATTTCCGACC
AAAATCTAGGAAGATTCGATGATTCCTCATGCTCAACAAAAAGCATTTGG
GAAGCATATCATATTCATTGCTGGCATAGTCCTTGTCATTTCTCAAAATT
CGAATTCGATAATTTCATAAATAACCTTTTACATGGTACGAAAGATTTGA
GCAATAAATTGAGTAAAGAACTGGTGAGAAACAGTTATGACAAAGACACC
AGAAATATGACAATGCAACAATTTTCTTCTTATATCGCTTATAATGCTAT
TGGAAAATATTTGGGAAGATATTTCCAGAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:563963..566805 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 103-1467:1366 |
| Aaloc | 1-99:2844 |
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