XLOC_045377 (mRNA) -

Overview
NameXLOC_045377
Unique NameXLOC_045377
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000171_pilon:320348..321501+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045377 ID=XLOC_045377|Name=XLOC_045377|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1154bp|location=Sequence derived from alignment at sc0000171_pilon:320348..321501+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAGAAATAATGAGACACGAgctgaaaaaccaaaaactttacaagaaaac aaaaaatgagcTGGCCAAGATGTGCACAGAGAATAAAATCAATGTCAATG GAACTACAAAAGTTGACATAGCCTTAGCCCTCCTTCAACACGAGGGAATT GATACCAAGCAGTTCAAAACGTCTACTTCATTTCAATACAATGGAGACTT ATCAAAAATCCCAGTCCTATCATCTCAAGTAAGAGATCTTGGTGAGTATT CGAAATAAGAGCAATTTTACCaacaattcaatttttaatgatcattaaac ccccccTTTGATATATACTATTTAACAATAAAAATGTGTTTCTTGTTTCC TTACCATTGTATATAAAAAAGGAAGTACCAATAAAATTGATGGAAACTTT TTGAGACTTCCTGATAATCTTTTTGCTGATACATCTAAGCACACGTTTTg cgcttaaaataatatttttcattaatttcttttttaatttaggTATTGCC TCTCTTAAGACAATTCTGCAACATCACAACTTGCccacacaaaaaaacaa agaccaATTAGTATTGGATGTATGTCTACTCAGGAGTGGTAGAAAACATG TGATCAACAAAGAAAAGAAGCTATCACTCTCAAAATTAATCGAGGTTGCA GAAAGCATAATGAGCCACCAAAGGTCTCTCAATGTTGTACTACCTCCGTC AAGGAAAAGGAGACATTCAACCCCAACACAATCCATTTTGAGCAGTAAAA GTCCAAGGGCAATGGCAAGTGCTTATCCCATTTACACTGAGAGTAAAATT GAGTTACCACCTAACATTACAAAGTTATCAATGGCTAGCATCTTAAAACC CTTGAAAGAAGATATTCAAGCATCCCTTCGCCCAGATGACAACGAAATTT CTCCTTCAGTCAACATATCGCCAGTGAATACATCAATCTCTGATGAATAT GaagctttttttgaaataggAGCAAAAGTAGCTGTTCGTTGGAAGAAAGA TCAAGGTTGGAAGTCTGGCTGGTTTGTTGCATTTGTGCAGGATTATGATA TGATGAATGATTGGATAAAGGTTGAATATGCAAGTGAAGAAGGACATTTA TATAAAATCGAAGTATCACAGTATCTGGAGAGTAaagatttgaaattgaa aagt

Coding sequence (CDS) from alignment at sc0000171_pilon:320348..321501+

>XLOC_045377 ID=XLOC_045377|Name=XLOC_045377|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1806bp|location=Sequence derived from alignment at sc0000171_pilon:320348..321501+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAGAAATAATGAGACACGAgctgaaaaaccaaaaactttacaagaaaac
aaaaaatgagcTGGCCAAGATGTGCACAGAGAATAAAATCAATGTCAATG
GAACTACAAAAGTTGACATAGCCTTAGCCCTCCTTCAACACGAGGGAATT
GATACCAAGCAGTTCAAAACGTCTACTTCATTTCAATACAATGGAGACTT
ATCAAAAATCCCAGTCCTATCATCTCAAGTAAGAGATCTTGGTAGAAATA
ATGAGACACGAgctgaaaaaccaaaaactttacaagaaaacaaaaaatga
gcTGGCCAAGATGTGCACAGAGAATAAAATCAATGTCAATGGAACTACAA
AAGTTGACATAGCCTTAGCCCTCCTTCAACACGAGGGAATTGATACCAAG
CAGTTCAAAACGTCTACTTCATTTCAATACAATGGAGACTTATCAAAAAT
CCCAGTCCTATCATCTCAAGTAAGAGATCTTGgTATTGCCTCTCTTAAGA
CAATTCTGCAACATCACAACTTGCccacacaaaaaaacaaagaccaATTA
GTATTGGATGTATGTCTACTCAGGAGTGGTAGAAAACATGTGATCAACAA
AGAAAAGAAGCTATCACTCTCAAAATTAATCGAGGTTGCAGAAAGCATAA
TGAGCCACCAAAGGTCTCTCAATGTTGTACTACCTCCGTCAAGGAAAAGG
AGACATTCAACCCCAACACAATCCATTTTGAGCAGTAAAAGTCCAAGGGC
AATGGCAAGTGCTTATCCCATTTACACTGAGAGTAAAATTGAGTTACCAC
CTAACATTACAAAGTTATCAATGGCTAGCATCTTAAAACCCTTGAAAGAA
GATATTCAAGCATCCCTTCGCCCAGATGACAACGAAATTTCTCCTTCAGT
CAACATATCGCCAGTGAATACATCAATCTCTGATGAATATGaagcttttt
ttgaaataggAGCAAAAGTAGCTGTTCGTTGGAAGAAAGATCAAGGTTGG
AAGTCTGGCTGGTTTGTTGCATTTGTGCAGGATTATGATATGATGAATGA
TTGGATAAAGGTTGAATATGCAAGTGAAGAAGGACATTTATATAAAATCG
AAGTATCACAGTATCTGGAGAGTAaagatttgaaattgaaaagtgTATTG
CCTCTCTTAAGACAATTCTGCAACATCACAACTTGCccacacaaaaaaac
aaagaccaATTAGTATTGGATGTATGTCTACTCAGGAGTGGTAGAAAACA
TGTGATCAACAAAGAAAAGAAGCTATCACTCTCAAAATTAATCGAGGTTG
CAGAAAGCATAATGAGCCACCAAAGGTCTCTCAATGTTGTACTACCTCCG
TCAAGGAAAAGGAGACATTCAACCCCAACACAATCCATTTTGAGCAGTAA
AAGTCCAAGGGCAATGGCAAGTGCTTATCCCATTTACACTGAGAGTAAAA
TTGAGTTACCACCTAACATTACAAAGTTATCAATGGCTAGCATCTTAAAA
CCCTTGAAAGAAGATATTCAAGCATCCCTTCGCCCAGATGACAACGAAAT
TTCTCCTTCAGTCAACATATCGCCAGTGAATACATCAATCTCTGATGAAT
ATGaagctttttttgaaataggAGCAAAAGTAGCTGTTCGTTGGAAGAAA
GATCAAGGTTGGAAGTCTGGCTGGTTTGTTGCATTTGTGCAGGATTATGA
TATGATGAATGATTGGATAAAGGTTGAATATGCAAGTGAAGAAGGACATT
TATATAAAATCGAAGTATCACAGTATCTGGAGAGTAaagatttgaaattg
aaaagt
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_045377XLOC_045377-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171_pilongenomesc0000171_pilon:320348..321501 +
Properties
Property NameValue
Aaloc244-903:495
Aaloc1-240:1