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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:939963..943022- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045294 ID=XLOC_045294|Name=XLOC_045294|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3060bp|location=Sequence derived from alignment at sc0000031_pilon:939963..943022- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATACACAAAGTGTATTCTTGTTGGATGGTGAATTAAGAATTCGACC
ATATGTCAGCAAAGTTCAATTGAAAGAAATTGCATTAAAATGTTTTGGCC
TTGAACTTGATGAAAATGTTAAACCAGTGGAAATGGTGTCCTATGATGAT
AGAAACTTTCGGGTTCAAGGTAAATATTAAGGTGGTTTTTTTTCAACTTC
AATTGCTGAATTGAGCTAGAATTAGTATAGTTGACGCTCTCTAATTCGAT
CTTCAAGGGGAATTGGATTTGCATCGAATAAGGGAGCGTGGGTTATGAGA
GTTTCTTGTTGACAAGGACTTTAAATTTCATCAAATAAAGGAGCTCTATC
AAATAGTAGAACGTCGAATTAGAGAGTGTCCACATTATATGTATTTCAAC
TGTATATATATACTTTAGCAAACAGAAACTTGAAAGATCTTCGGAAAATT
TGGCCCTTATTTGTATAGGTTTACGCGTTTGATTTTTTAGGAAAGTTTAT
AAATCATTAAAAAGTATATACAAAACCTGAAACTGTAACTAATATTTTCA
CCTTTCAGTCTTCTTAAACTTGCACTTTAATAGCTGTTTAAAATTTATTA
TGAATCAATAAATTTTTGTCAGTATTTGAAGTTACTGCTCTGCTTCAGTG
GTGGCTGAAGAACTGTTTAATGTGCAAAAATTTTCAAATTTCAAAGATCG
ATTTTGTAAGATAGAGCAACAGGCAACATTTTGCCATTCCCCTAGCGGTC
TGCTTAAATGCGTGACAAGGGAAAAAAATAAAGCGTGAATTGAAAAAATC
TTGCGTGATTTTGATTGCGTGAATGCGTGAATCTGCGATAGTTTTTACGT
GAATACGGGAGTACACCGTTTAACAGTGGTGACTGTGCACGCGTATGAAC
AATTTTCCATTGTTTTAATTTTGGCAACCACGGGAAACTTCACTCTCCCC
CGTAAAAAATGGTAGGTAAACATCCAGTTCTCATAAGAAAACCCAGCAGA
GAAATGGTAGGTAAAGAACTCCTTTTAATCATAACTTCTTTTCCTCTAGA
TGAATTTTTGGGAAATTTTCAGGAGAGATACATAAAATTGTCATTAATAT
CATGTTCAAATATCTAAAACATTATCTTTAAAGGAAAGAAAAAAAAATGG
CAATGTTTACATTTCTCTAACCTTCCACAGTACTAAAGTGAGCATTTTTA
CCTACCGCCTCTACGGTGGAGATGGCGAGACTGTTAAATGGTGTATTGTC
CAATGATTGAATGAATGTGCAAATTTTCCAATTTTCAAGTTTGTTTCCGT
TTTTTACCGAAAAAGTTCCCGATTTACTGAAAAATTGGGTTTGCGTGAAT
TGGAAAAAACGTTTGCGTGATTGCGTGAATTGAGGGTTCGCTGGGGGAGA
AGGCTCATTCACATTGACATTTTGTTAGCAAATACCAATTTAAAATTCCG
ACCAAATTTTTTTTTAATTTTTACTCTTTTCTTAATTAATCCCCCTATGA
AAGTTTAAAACCCCAAATTTTATCCGTAAAAAAAGTCCCACCCCTTCCCT
AACAAGCCTTTCTCAAAATCATAATTGGAAGGCTTTCTATATTTGAAACA
CATTGTTTTTACATCTTAGGTCGACTGAAGAATGATGACATCACAAGAAA
ATTCGTTCTGAAAATTTTCAATTTTGGATCAGCACCAAAACTTTCAATGG
AGCTAGCTGTTGATCTATTAATACGATGTGGTGAACAATGTTCTGATTAT
TTAAAAGTCTCTACACCAATCAAATCTTTACAAAACGGTCATTCTACTGA
AAATGTTGAATTTATTTCAAGTTTTGATATTCCTGTACTTGAATTTGCAT
CATATAATAATTGCACAAAAGAAGATTTGATTGAAACAGGGGCACTGAGA
GTTGGTACATCAGGAGAAGTGACTTGTCGCCATCATGTGAGACTACTGAC
TTATCTTGAAGGAAGAGTTCCTGATTTTTGTAAAGACAATCTTACAGACT
CTTTCGTTCGACATTGGGGTGCAACTTGTGCAAGAATTTGTAATGCATTT
GAAGTGAGTGATTTATTTATTGCACCACCCGTCTTTTCTAAACTCCATGT
TAGTTATTCCAATGGGGAATATCTTTCGGTCTATGGTATCCGAAATAATA
TGTAGCACTGTCTTTGGTAAAACAAACCCACCTTTATCAATACTAAAGGC
TTAGGGACACGAGAAGTTTTTTTCACGTTGAGGCAATGCAACATGCTCCA
TCCCACCAACCTGAAACGCTTTCTCAGGTTTCAACCCCATTTTCCATTTA
ATAACATTTATGCTTCTCTCACTTTTGTCCCAGGGACAAAATCAACGTGT
CTTTTGGGTAAATTTCCCTGCATTGCACCAACGCGAAAAAAACTTCTCAT
TTCCCCAAGCCTTAATATATGTAATATAGAAACTTTTCACATATTTTTTG
TCCTTAGGGAGAAGCAAAATCAGAAGGCGATCGTGGAGGTTGGATATGGA
ACCTTGTGACGTGTCCTCAGTATCTTACCGAAGATTATTTGAGCACCTGT
ATCAAAGATCACGAGCAGAGAAAAGTGTTATCTTCTATTATAAGAGAGTT
CGAAACTGAAACGTTACCTCTGCTGAAAAAACATTTAAAAATGTCATACA
TACATAATGATTTGAATGAAGCCAATCTTTTGGTAAGTGCTAATGATAGC
ATTGATGGAGTATTGGATTTTGATGATATAGCATGGTCGTTCCCGGTTGT
CGATTTGGGTATTTGTATGATGTATTTATCCTTAGCATCTCAAGAAGAGG
ATATATTTCATAATTTGAATCTACTTTATAAAGGATTTACATCCACACGT
TGTTTAAATGATGTCGAGGATTCGGCATTGTATAATATCTGTTTATTACG
GTATGCAGAAGTGACTGTCATCTCACTTTATCAACATGAGTTTGTTGACC
CAGATAATGATTATTTGCTTCTCCATACGGCAGATAATTTTAAAAGAATA
GATTATCTGAGATCGGCAGGTCCAACAATATTTAAAAAGAGAGTTTGTTC
AGAAGATTGA Coding sequence (CDS) from alignment at sc0000031_pilon:939963..943022- >XLOC_045294 ID=XLOC_045294|Name=XLOC_045294|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2412bp|location=Sequence derived from alignment at sc0000031_pilon:939963..943022- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATACACAAAGTGTATTCTTGTTGGATGGTGAATTAAGAATTCGACC
ATATGTCAGCAAAGTTCAATTGAAAGAAATTGCATTAAAATGTTTTGGCC
TTGAACTTGATGAAAATGTTAAACCAGTGGAAATGGTGTCCTATGATGAT
AGAAACTTTCGGGTTCAAGATGGATACACAAAGTGTATTCTTGTTGGATG
GTGAATTAAGAATTCGACCATATGTCAGCAAAGTTCAATTGAAAGAAATT
GCATTAAAATGTTTTGGCCTTGAACTTGATGAAAATGTTAAACCAGTGGA
AATGGTGTCCTATGATGATAGAAACTTTCGGGTTCAAGGTCGACTGAAGA
ATGATGACATCACAAGAAAATTCGTTCTGAAAATTTTCAATTTTGGATCA
GCACCAAAACTTTCAATGGAGCTAGCTGTTGATCTATTAATACGATGTGG
TGAACAATGTTCTGATTATTTAAAAGTCTCTACACCAATCAAATCTTTAC
AAAACGGTCATTCTACTGAAAATGTTGAATTTATTTCAAGTTTTGATATT
CCTGTACTTGAATTTGCATCATATAATAATTGCACAAAAGAAGATTTGAT
TGAAACAGGGGCACTGAGAGTTGGTACATCAGGAGAAGTGACTTGTCGCC
ATCATGTGAGACTACTGACTTATCTTGAAGGAAGAGTTCCTGATTTTTGT
AAAGACAATCTTACAGACTCTTTCGTTCGACATTGGGGTGCAACTTGTGC
AAGAATTTGTAATGCATTTGAAGTCGACTGAAGAATGATGACATCACAAG
AAAATTCGTTCTGAAAATTTTCAATTTTGGATCAGCACCAAAACTTTCAA
TGGAGCTAGCTGTTGATCTATTAATACGATGTGGTGAACAATGTTCTGAT
TATTTAAAAGTCTCTACACCAATCAAATCTTTACAAAACGGTCATTCTAC
TGAAAATGTTGAATTTATTTCAAGTTTTGATATTCCTGTACTTGAATTTG
CATCATATAATAATTGCACAAAAGAAGATTTGATTGAAACAGGGGCACTG
AGAGTTGGTACATCAGGAGAAGTGACTTGTCGCCATCATGTGAGACTACT
GACTTATCTTGAAGGAAGAGTTCCTGATTTTTGTAAAGACAATCTTACAG
ACTCTTTCGTTCGACATTGGGGTGCAACTTGTGCAAGAATTTGTAATGCA
TTTGAAGGAGAAGCAAAATCAGAAGGCGATCGTGGAGGTTGGATATGGAA
CCTTGTGACGTGTCCTCAGTATCTTACCGAAGATTATTTGAGCACCTGTA
TCAAAGATCACGAGCAGAGAAAAGTGTTATCTTCTATTATAAGAGAGTTC
GAAACTGAAACGTTACCTCTGCTGAAAAAACATTTAAAAATGTCATACAT
ACATAATGATTTGAATGAAGCCAATCTTTTGGTAAGTGCTAATGATAGCA
TTGATGGAGTATTGGATTTTGATGATATAGCATGGTCGTTCCCGGTTGTC
GATTTGGGTATTTGTATGATGTATTTATCCTTAGCATCTCAAGAAGAGGA
TATATTTCATAATTTGAATCTACTTTATAAAGGATTTACATCCACACGTT
GTTTAAATGATGTCGAGGATTCGGCATTGTATAATATCTGTTTATTACGG
TATGCAGAAGTGACTGTCATCTCACTTTATCAACATGAGTTTGTTGACCC
AGATAATGATTATTTGCTTCTCCATACGGCAGATAATTTTAAAAGAATAG
ATTATCTGAGATCGGCAGGTCCAACAATATTTAAAAAGAGAGTTTGTTCA
GAAGATTGAGGAGAAGCAAAATCAGAAGGCGATCGTGGAGGTTGGATATG
GAACCTTGTGACGTGTCCTCAGTATCTTACCGAAGATTATTTGAGCACCT
GTATCAAAGATCACGAGCAGAGAAAAGTGTTATCTTCTATTATAAGAGAG
TTCGAAACTGAAACGTTACCTCTGCTGAAAAAACATTTAAAAATGTCATA
CATACATAATGATTTGAATGAAGCCAATCTTTTGGTAAGTGCTAATGATA
GCATTGATGGAGTATTGGATTTTGATGATATAGCATGGTCGTTCCCGGTT
GTCGATTTGGGTATTTGTATGATGTATTTATCCTTAGCATCTCAAGAAGA
GGATATATTTCATAATTTGAATCTACTTTATAAAGGATTTACATCCACAC
GTTGTTTAAATGATGTCGAGGATTCGGCATTGTATAATATCTGTTTATTA
CGGTATGCAGAAGTGACTGTCATCTCACTTTATCAACATGAGTTTGTTGA
CCCAGATAATGATTATTTGCTTCTCCATACGGCAGATAATTTTAAAAGAA
TAGATTATCTGAGATCGGCAGGTCCAACAATATTTAAAAAGAGAGTTTGT
TCAGAAGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:939963..943022 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 604-1206:604 |
| Aaloc | 172-603:1440 |
| Aaloc | 1-168:3061 |
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