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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:871762..875498- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045293 ID=XLOC_045293|Name=XLOC_045293|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3737bp|location=Sequence derived from alignment at sc0000031_pilon:871762..875498- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAACACTATGAATACCATGGTCGTGCAAGCCAAACCAGAAATGAT
GACACACATACCACACCCACACCATCAATTAAAACCAGGTGTTGGTGGAC
CCGGATCACCCGCTATGCAACACCCTGGTAAGAACTTTGTTTGAGTGGGC
TCACGTCCAAACGGTAGCGAACATTTCTAAGCTCTTTGCTAAAAGGGATT
GGCATGGATACAAACTATATAAGAGCTGACTAAGGCTTCGATAGCCTTTA
GTATTAAAAACAAGTTAAGAACACCCAATTTCTTAGGAAATTGCACAAAA
ATGCCCAAAAGATGGTGAAATTAGAACATTTTAGGAACATTTTTAGGCTG
AAAACTGAAAAAGTTATAAACATTATGAACATTTTGGATGTTCTTATAAA
GAACGTGTACATGTGCAATCTAAAACACCATTCGGGCAACCATATAGATA
TTACCACAAATAGACTTACAACAACATTACCAATCAAATCCACCCTTGAG
ACCTAGTTTATTGTAAGTTACTTTCAATGAATTTTTGTTCTTAATTTTTA
TCATTCAGGGTTGGTCGCACATCCAGGATTAGTTGGATTGAATGGAGATA
ACCATGTTAAACGACCTATGAATGCTTTTATGGTGAGTGATTTGCAACTA
TCGGGCATTCCGTGTACATAGTATACATTTTTGAAAACACGAAGTGGAAG
TTTGGCCTAAGCTGAGATCAACAATTTAAGCTTAAAAGCGAACTCGGTAG
CATCTGGTCTTGATCGATGTGCTTTAGAATTCTCCAAAAACAGATAGTCA
AGCCTCCAACTAAAATCTTTGCGTTCAAGCAAATTTAGTACCCACATAGA
AGAAATTTGTAGTGGGTTAATATAGTCATAACATCGAAAACCCAAGGTTA
CACATCAATCCATGTATCCACTTCAAACTAGCTGACATCTATATTATATT
CTTTGCCTTAGGTTTGGTCAAGAGGAAAGAGGAGACAGATGGCCCAAGAA
CACCCTCGCATGCATAACTCTGAAATCTCTAAGCGGTTAGGTGCACAATG
GAAAGTCCTAACACCTGAAGAGAAACAGCCGTTTATTGGTAAGACCTTAA
TTATTGGTAGCCCAATAGATAAAGAGTCAATCCTTGGGGTTAAAAATTAG
ATTTTGATTACAAAACAATAACTTTTTTGAACAAAGACAAAAAGCCATCC
AATTTGAAATTGAACACTTAGAAATAGTGTAGTATCCATAGCTGATAACT
TGTTCGAGTTAAGATTCGAGATATTAGATATGAAGAACCTACTGTGTAAC
ATTTCATTGCGTGAAACCGGTTAACACTTTTGGATTTGAGTCAAAATTCT
CTCTGTAAAACATTAAGGAAGGAAATGGGATACAAGAACGGTCTAAGAAC
GTATGAAAAGGTGTGAAGCTAATTAGCCGGACGTCAAGATCTCTAATGGA
TTATGACCTATTTAAGGGGCTGTACTGAAAAGCTTTGTTTTACTTAGACA
CGATTTCCTGTAAAGGAAATGCACTGGTTGTGTTGAGGATTGACAGTGAG
CTTACTTACTATATTTCGAAAAATTTTGCTTTAATCAGACTTATGAATTT
TGTAATCATGAGTCATCAACAGGGATATTTTACATTAGAATCGGCAAAAT
TAACCAAATAGAAACGACCAGGTTAAATGTTTGAAGAATTTCTAAAAAGG
AAGACTCTTCGAGGAAATTTCGTATTGGTATTCTAGTAATTCTAACTTTT
ATGAAGTCCACAGTTTTTATATAATTACATGTGTTTGTCGTGAAAGATGA
AAGAAGTAACGCGTACAAAAAAAGTTAGTTAGTATTTCAATATTGACTTA
AAGATTTTAATATTGAACGGAATTCAAAAAGGGTGTTTACTGCCTTCTAA
CCGGTTAATATTATGATTCAACGAAAAAAAGGGGACTTTATTGACATAGT
AATGTTGATTTGATTGCTTTCGTTTTTCTTTGATGTAGATGAAGCCAAGC
GCCTTCGTGCCGTTCACATACAAGAACACCCTGATTACAAATACAAACCA
AAACGCCGGAAGCCGAAACAAATGAAAAAAGACATGTACCCAGCTTATAG
CAACATGGCAGCCTCGACTACAATAATTCCGGGTATGGACCCAAAATACG
GCGGAATGGCCTACCAACAATCAATGGCATATGGTATCTCGACCATGTCA
CCCGATTTATACGGAAAAATGAATGCTGCATATGCCTATCCGGCTGCTAT
CAGCCCCGGATACCCTGTGATGTACTCTAACTACCCTATGACAACTATGG
GTACCACGGCACCAAGCGCCGGCTCAGGCAGCGGTGGAGCCCCTTCCCCA
ACCTCCAGTAATGGAACTAGAGGCTATAATACAGCTTCCTTAGGGTCACC
TAATGGTTCGTCAACAGGCGCCACGATGGCGGATTCAAACGCAAACACAA
CATATCGCCCAACTTCAACAGAATATATGACTTCTAAGAGCTATTACATT
AATGGTGGACAGTACAGCCCTCTCCCTGCAGCAAACGCCACTCAAGGTAA
AAATTAGCTTTCAATCAATGGGTTTGTTGATAATGGGTCTAAAAGATAGT
TTGGGCTCAGAAACGACTTTTGAAAAATACCAGGGACCAAACATGTTCAC
AAGAAAATCTCTTTTGGGCTGGGCTGGATTATTTTTAGGGTTCGGAGAAA
TTAAAGTAGAGCGGTGTCAAATAGAACTTCTATCATTCACATTTTCCTAT
GATTCGAACTTCGTTCATTTCGATTCAGTTCATACTTCGATTCTGAATTA
GCAGAGTCAGAGGTTTTCCGACTCTGGTAAAAAATGTCTGAGAACAGATA
CAGTACAAAAATGAAATACAACTAATAATTGATTTATATCAGGTCACTCA
CAGCAACCACAAGCAGCCAGATACCCTTCACCTCATGATGAAAGTCGAAT
CTCACAAAGCGTCGTCTCACAGAGTAATTCAGATGCAGCAACCACCGGCT
CCATTTTAATGCCAAAAAGCGTAAATGGAAGCGCAGAGGAACACAGCCCG
TCACCACCAACTTATCCATCAACTAACACACCCGTAGGACGACATTGGAC
ACCTTCGGGTGGTTCCGGGGCACCGACTCAAGATATGACTAGGTAAATAG
TGAAAAGAATTCAAAGAATTGCTTTCCAACTATCTTCCTTCAGGAGTGGG
TAGTAGAGCAGGTGTATGCACTTCGTCCTTATCGGGATATAGTTTTTGAT
TTACATAATTAAACGTATTTTTAGGGAAGATTGCAGCTTTTCAGGGGGAC
GGGGAGAATAAAGAAGTATCTAAGGATATTTTACTACTCTAGTTTTTCCC
TAAATTTGCAATATTTTCTACAAGTCCCAGACCCCTTAAAATTTTACAAG
GCGCCAGGATATGGAACCATTTCCTCAATTGTGGAAGGCTCCCAGGATAT
ACCATGTCTACCCAGTTGTGTAATTTAGGTTTAAAATGAAAAATGGGAGG
GACTGATATAATAATTTCCGTAAGGATTCAACCTCATACGTTAGGGGTCT
TGGCACCAAATTATATAATACACATCAATTATAGAATCTTGATTATTAAG
CGTGTGGTGTTAGGGTGCAAATTATGACTCATTGCTCACTGAATGATGCA
ATCTGAATTGTGTCTCTTTAAAAAAAAAACCTTTGTAACAAAACGTATCA
TTTTATGTTTCTTCATTTTAGTGGGAATTTTCATTAA Coding sequence (CDS) from alignment at sc0000031_pilon:871762..875498- >XLOC_045293 ID=XLOC_045293|Name=XLOC_045293|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2304bp|location=Sequence derived from alignment at sc0000031_pilon:871762..875498- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAACACTATGAATACCATGGTCGTGCAAGCCAAACCAGAAATGAT
GACACACATACCACACCCACACCATCAATTAAAACCAGGTGTTGGTGGAC
CCGGATCACCCGCTATGCAACACCCTGATGTACAACACTATGAATACCAT
GGTCGTGCAAGCCAAACCAGAAATGATGACACACATACCACACCCACACC
ATCAATTAAAACCAGGTGTTGGTGGACCCGGATCACCCGCTATGCAACAC
CCTGGGTTGGTCGCACATCCAGGATTAGTTGGATTGAATGGAGATAACCA
TGTTAAACGACCTATGAATGCTTTTATGGGTTGGTCGCACATCCAGGATT
AGTTGGATTGAATGGAGATAACCATGTTAAACGACCTATGAATGCTTTTA
TGGTTTGGTCAAGAGGAAAGAGGAGACAGATGGCCCAAGAACACCCTCGC
ATGCATAACTCTGAAATCTCTAAGCGGTTAGGTGCACAATGGAAAGTCCT
AACACCTGAAGAGAAACAGCCGTTTATTGGTTTGGTCAAGAGGAAAGAGG
AGACAGATGGCCCAAGAACACCCTCGCATGCATAACTCTGAAATCTCTAA
GCGGTTAGGTGCACAATGGAAAGTCCTAACACCTGAAGAGAAACAGCCGT
TTATTGATGAAGCCAAGCGCCTTCGTGCCGTTCACATACAAGAACACCCT
GATTACAAATACAAACCAAAACGCCGGAAGCCGAAACAAATGAAAAAAGA
CATGTACCCAGCTTATAGCAACATGGCAGCCTCGACTACAATAATTCCGG
GTATGGACCCAAAATACGGCGGAATGGCCTACCAACAATCAATGGCATAT
GGTATCTCGACCATGTCACCCGATTTATACGGAAAAATGAATGCTGCATA
TGCCTATCCGGCTGCTATCAGCCCCGGATACCCTGTGATGTACTCTAACT
ACCCTATGACAACTATGGGTACCACGGCACCAAGCGCCGGCTCAGGCAGC
GGTGGAGCCCCTTCCCCAACCTCCAGTAATGGAACTAGAGGCTATAATAC
AGCTTCCTTAGGGTCACCTAATGGTTCGTCAACAGGCGCCACGATGGCGG
ATTCAAACGCAAACACAACATATCGCCCAACTTCAACAGAATATATGACT
TCTAAGAGCTATTACATTAATGGTGGACAGTACAGCCCTCTCCCTGCAGC
AAACGCCACTCAAGATGAAGCCAAGCGCCTTCGTGCCGTTCACATACAAG
AACACCCTGATTACAAATACAAACCAAAACGCCGGAAGCCGAAACAAATG
AAAAAAGACATGTACCCAGCTTATAGCAACATGGCAGCCTCGACTACAAT
AATTCCGGGTATGGACCCAAAATACGGCGGAATGGCCTACCAACAATCAA
TGGCATATGGTATCTCGACCATGTCACCCGATTTATACGGAAAAATGAAT
GCTGCATATGCCTATCCGGCTGCTATCAGCCCCGGATACCCTGTGATGTA
CTCTAACTACCCTATGACAACTATGGGTACCACGGCACCAAGCGCCGGCT
CAGGCAGCGGTGGAGCCCCTTCCCCAACCTCCAGTAATGGAACTAGAGGC
TATAATACAGCTTCCTTAGGGTCACCTAATGGTTCGTCAACAGGCGCCAC
GATGGCGGATTCAAACGCAAACACAACATATCGCCCAACTTCAACAGAAT
ATATGACTTCTAAGAGCTATTACATTAATGGTGGACAGTACAGCCCTCTC
CCTGCAGCAAACGCCACTCAAGGTCACTCACAGCAACCACAAGCAGCCAG
ATACCCTTCACCTCATGATGAAAGTCGAATCTCACAAAGCGTCGTCTCAC
AGAGTAATTCAGATGCAGCAACCACCGGCTCCATTTTAATGCCAAAAAGC
GTAAATGGAAGCGCAGAGGAACACAGCCCGTCACCACCAACTTATCCATC
AACTAACACACCCGTAGGACGACATTGGACACCTTCGGGTGGTTCCGGGG
CACCGACTCAAGATATGACTAGGTCACTCACAGCAACCACAAGCAGCCAG
ATACCCTTCACCTCATGATGAAAGTCGAATCTCACAAAGCGTCGTCTCAC
AGAGTAATTCAGATGCAGCAACCACCGGCTCCATTTTAATGCCAAAAAGC
GTAAATGGAAGCGCAGAGGAACACAGCCCGTCACCACCAACTTATCCATC
AACTAACACACCCGTAGGACGACATTGGACACCTTCGGGTGGTTCCGGGG
CACCGACTCAAGATATGACTAGTGGGAATTTTCATTAATGGGAATTTTCA
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:871762..875498 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1138-1152:16 |
| Aaloc | 889-1134:844 |
| Aaloc | 331-885:1748 |
| Aaloc | 202-327:2777 |
| Aaloc | 130-201:3178 |
| Aaloc | 1-126:3738 |
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