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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:642898..650798- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045282 ID=XLOC_045282|Name=XLOC_045282|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7901bp|location=Sequence derived from alignment at sc0000031_pilon:642898..650798- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGGGGCGATTATTTTGTTGATATTTTGCACTTGGAATGAACAGTT
TTCGTATGTGTTCGGAGAAACAAGCGACATTGGTTATGGGATGCTGACAA
GAAGACAGGGAGTCGAGGTAAAATACAAATTACAAACTATCGTCGTGTTT
TTTATAAGTTTTCTGTTTCCACGCTAAGATTCTTGTCACGTTTTCAGAAT
CTTTACGCTATTTTTTCAAGGATAGCCGGCATTAGATTGGAAAGGGTTTG
TTTCTACGAAAAATCTTGTGTTTACTTACTAAACTGCCTAACTTTCCGAA
GCTCATTTTTCAACGACCCAAAGTCCTGGTCTTTTTCCGCTAGTAGAGTG
GCAAAGGAATCTGGGAAAAGTGGGAAACTGTAAAAAACGGCGGTATATAA
GAATAAGGCTTCGAAGGCCAAAATATTGAGAACATGTTAAGAACATTTTC
AGGCTTCACAGACTCTAAAACACCCAATTACTTATAAAATAGTACAAAAA
TACCCATGGAATGGTGAAAATACGACCATTTTAAGAACATTTTATGCCTT
TTATGCTAACAAAATGTTCTTATAAAAAACGTTTATATCCCATACAAGGG
AAGGGTATCAAGAGGTATCAAGTGATTTCAATTTTTATTTCCAATTTCTG
TCAAATCTTCTTCAAAGAAAGAACAAAAATTGAAAAGTTGACGATTTTCA
AGGATTTATCAACAACCTTGTCTCATAGTGGAACTGTTTCCCACAGTGGG
ATGGAATTTTTATCGAAATTCCAATGGGGATAAATATTCCAAAAATTCCA
CACCAATCCAAAAGCTTTTCGAACTTTGGACTCTTTACGATTGATATGTT
TTGGCAAATTATCAACTAAAAACTCCGTTATATTTCTTATCAGCTTGATC
ACAAAGAGATTGTCGATCTTGGAAATGGAAAACGAGTAGAAGTTATAACC
AAAGCATTGAAGCCATTACTGTTTGGTAAGTTGCTACTTGGAAAAATGTT
GTTAGAATTGTTGTTGCATATAAAAATCAATATATATTACAATCACAGCA
AAAAGTCCTTTAAATCAAAATTTTGGCATTTGAAGGTCAAAATCTTTATC
CTGAATCACCATTTTATCATCAGTTTATTTACTTAATAAACTTATTTTGG
GAGGGTCCATTGAAAATATAGAGATACTCACATCAAATGGTAGATTTGGT
ATAGAAAAACAACCCTGTCTCACAGACCTGTTAGAACTTCGTCCCACAGG
GACGACGAAAATTTCTATTTTTCGTGCATGTGAAAAAAGCATCATGGCGG
AAATGACGTAACTTAACAAAACATTCAACATTTTTCTTTGCACAGAGATT
CCAGACTTTCTATCTGAAGAAGAGTGTGATCATATCATCAAACGAGCCCT
GGATCCACAAGAAGGTGGAATTAAATTATTCGACAGCCAGGCTAAAGGAG
GATTGACTTCTAATGAAACACTCAAAGCTGTTGGAGGTGAATATTTTCTT
TAAGAAAGTAATGGTTCTGCAGCTAAAGGATTTTCAGCAATGGGCTTTTC
CAGAAAAAAACCCGTATACCCCCTGTTGAGGAGGTCCATCATTTTGTGGC
TGGAAATGCTGCAAGCCCCTAGAATTCCAGGCAATTTCAGGCTTAAACCC
CTCTGGAATTCTGAATTTTAGTAGGATTTAAAAGGCTACCCCCATGGAAT
TCCAGTTATTTTTGACAGATTTTTGTATCTCCCTATAGAATTCCGCCACA
TATCAAACCTTACCCCCTTGGAACGGAAATGGACCTCCTCAACAGGGGGT
ATACGGTTTTTTCTGGAAAAGCCCAATGTGGCTACTAAGATTTCACCACC
ATTTTAAACGAAGATAAGAAAACCTCTGAGATGCTTTTTGCCAAATTTTT
GCTAAATTTTCTCAGAAAAGCATTTTTTAACAGGAACTTTTTATGTGCTT
TCTCAATTTTACAATTTTAAGGCTTTTTCTCAGACTCAAAATTGAATCTA
CCCCACCAACTCCCGTTCAAAAGTAAATCGAGTCTTTGGGTGCACTCATC
CCTTAACATATCAGAAAGATACTGCGGCGGCCGCCTAACCGAGAATTCGA
CCACCTCAAATGGTGTTAAAAAGTGCGATAAAGATGTTAAAGGTTTTGTT
AATTATTTTTTATTTAGTTAATGGTCAATCATTAGGATGGCTTGGTCGCT
ACGAAGGTTGGGATAAGGATGGCGATGGAAACATTACAATCGAAGAGGTA
GCCAATCCAAACCTTAAAGGGACATAAAAGTAGTAAAATGTAAACATTGC
GCAAACCACGTGTCATTAAAGAGAACAATTAAAATCACGTGTCCAAAACA
AACTTGTAAAACAATTGAAACAATCAAAATTAGCCATATTTGTTTTGATT
TTTTACTTTGGCATTGTGTATCCCGCTGCATAAGGTTTGTTTACAAATGT
CGTCAGTACTTTTATGCCCCTTTAAAAAACCATAGACGTAGCGAGATATA
ACAATATATATTCTAATCTTCTAAGATCTTCCTTTTCTTGTCTAAAACAT
TATTGACAAAACATTCATTATGTACGGTCTTATCATGCAGTACTTAGACA
AAAATCCTCCCCATAAAGAGCACACTAGACACCCGAAAGCTATATCGAGT
TAAAAGTAGGCCTTCACGATTCAAATAAGCTTGTAAAAGATTAAGACTGA
AGTTAAAAACTGTGGCTAGATGGCCTAGAAACTGTATTTATCTCGCAGTA
TTTGTAATAATGTGGTTTTTAACAATGCGCATGTTCATACCATGGTAAAT
TAATTTCAGATCATCTCGATTGCACATTTAACAAAGACTTTGGTCATGGA
AGAACCCGATATTCGAGATATGTAAGTTGATTCTAAAATACCAAAAGTTT
CGGATGTGAATAAATTTAGGTCCCCAGTTATAAACAGTTTCGAGTATTTT
GATGTGACTTCGTACGAAACTTGTATTTTAAGTAAGTTTTAGAGTCCACA
AAGCATTACCTAGATCGTTTTTAAAAGATGTTCTTATTTTTTTTCACCTA
CAGTATGTGGCCCCCAAAACGGCGATCAAATTTGAAATTTCTCTCAAATC
TAGAGGAAAAGAGATTTTACAAAAATTTTTGCTGCATGAAAACCTTTAAC
ATCTCTTCTTTATTTCCTGGAAGTTCTTTTTCAAAATTTTCAATTTCAAC
AATATTTTTCAATCGCTTAAAGATAGGTAGCTCTTTTTTAGTGGCCCCCA
AAACGGAGGTTTGAAATTTTAGCGATTTCTCGAGATATCTTTAAGATATG
AATACAAAATTTTAACCACAGTTTTGAAATATGATTTAGAGGGTTTTGGG
CATAGCTTTATTTGATAAAATTTTTACAGTATACCCCTGGTTGTCAAAAT
GCAGGTTTGGGGCCCCCAAAACGGAGGTGTAGTTAAAATCAAATTATTAA
GCCCAGTGGTAATAGAAGGAAAAACTATGAACATATTTGTGTTTTCCCTT
AAATTTACGAGCCGATGGATGTAAAATTTATGATTTTTATGAAATATTTC
AAGATTTTCGATATTGCAAAGTCCAAACTGAAAATTTAGAAATTTTCAAA
ATGACAATTTTGATTTAACAACGTCTTAATCAAGTTTTTGAAAACAAATC
TCTTTTGTAAATAGTTCCATTCATGTATGGAATAAGCTGTGAAACTTTTA
GAAAAAAAGCTTAACTGAAACTGAAAATATTAAGCTTTAAAGATATTTTT
CTCATATATTTTGCAAAAAAATGACAGAATTTGCTGTTTTTGCTGATTCA
GCGAAAAAATTTTTATATAATGTTAATTTTTTGTTATAAACTATCAACTC
AAGGTGATAGGAATAGAATTCCAAGATTTTTTGCTTTTTCTCATATTTAG
AATTTTCGGTTTTGTCAATGCTGATTCTAGGGCTCCAAAATACTGGTTGA
CCTTCAAGATGCTATATCTTTTACCCAGCCTCTAAAGTCACAGATGTATT
TGCATTTTCTGAACGGCATTAGGTGTAGAAAGTTTCCTATACCCCGTTTT
CATAACTTATTTTCAATATCCAAAGAGCTAGAGTGAGTTATATGCAATTT
TTATCTAATTTTGGTGTTAAAATATTTCCTTTAGACGCAAATATGTTATT
TTGAATCTGTCTCAAACCAGCAAAAACATGCTCATTTTTAAATATAACTA
TCATTCTTTCAAAATAAACAAAAATCGTTTAATTCTGATAAATCTACAAG
TCAGAATCTTCATTTTAATGAAAACCTCCGTTTTGGGGGCCGTCTCCGTT
TTGGGGGCCATATACTGTAACTATTTTGTTTTAAACATTTTAGATTTAAA
GCTGTTGGACAACCAAGCATCCTAGATGATGGTGAGTGTTGATTCACTAT
TGTGCAGCCAACAAATTAGTACACAGTTTTGCCATTTAAAAAGCGGGTTT
CACGGTTGGCAGAGGAGCGGAATCGGCCCTTTTTTGAGCGGAGTGGTCGA
ATTAGACGAAAATGTTGACGGAATTTCGGTAATCGGGTCCTCTATCGGAG
ATGGAAAATTGGCCAATTTTAGTGCGGAAAAGGGAATTTAGCCAACAAAT
TGGCGCAATTTCGGAATTGGCAAAAGTATTCAAAATTTAAAGTGAATTCG
AAGAATTTTTGACAAAACCCTTGAATTTCGAATGAATTTTCGGTGCCGGA
ATTTTGGTTCTTTTTAGACGGTTTGCGGAAATTGGGGGAAAATTGCGTAA
TTGCCCCCCCTCCTGAGACTATCATTATCAACCAACCAATCCATAGTTTT
GGTTGAAGCTTGACCGTTCTAATTTTTTTAACCTTCAGGCGCTCTTATGC
TCATAAGAACATTTTCTACTTACACAATCCATAGTTAAATTGACCCATTT
TATTCTTTGATTTCCATACCATAGATATAATTACAAAAGAAGAATTTCAG
TTGTTGAGCACATTAGCAGTTGAGAAATATCTTGACAATTTATGGCAAAA
CCATCCACGTTTCAAACCAAGGACCAGTCAACAAGCATGGTTATTCATGG
AACAATGGCTTGACCCTACAGTGCATAACATCAGAGAAAGGTATTTGGTA
TCTTAAATTCTGGCCACCCATCCTTTAAGTAACCAATTTTTTGGAAAGTA
TTTTCAAAAATTCTTTCAATCATACCAATGATTAGGGATCACGCATTTAT
TCCAGAATCGGTATTTTAGGTAACCAAAAGCAATTATATATCAGGTATTT
GGTATCTCATGTCTCAGAGGTCTCTGGTACCCTATGAGCTCATTACCGCA
ATGTTCACCCTAACTGGACTTTGAAACAGCTACTACAAATGAAGCTCCAG
ATTCATAAGGAAAAACCACTATATAAAAAAGAGATTTGCAAGAAAAAATT
GACGAGTTTCCACCTGAAAATGTAATGAACAAACAAACTATTTGAACATT
TTTTTAGATTGGTACGATTAAGTGGATTACCAAGAGAAATTATATACGGT
GGTGAAATGCTACAGGTACTTTTATGTTGAAACTTGAAATTTGTAGATGA
TACTTAAATCCATGAGTTCCGGGAAATTTCATCTCTTTAAAGTATGCTTA
AATGTCATTTTTGCAAGTCTATTCATGATATGCAACCCTGCAATAAATAA
CTACTGACATTGCGTCATTTTATTACTAAGTTTTTGTCTCAGATGGGACT
TTAAACAAGAAATTAGGCAAAGTTTTTCAATTGTTCACAATTCTGATGAA
TTTGGAGATAGAAAAACCTCTTTTTGTACCTCGCTGAGACGGAAGAACTT
TGTACACTGCATCTGATTGGTTGTAAATATGTATAGAGGGGGGTTGTACT
TTTACGGTGTGACGGGATTTGCCCTTTTTTAGTACGGTATTACGGGATTT
GACGAAAAAAGAGACGGGAAAATGGTATTTTAAAATCAGACGGTGACGGT
ATTTAGGCACATTTTTGCCCTGTACAAGCCGGTGTGACGGTGTTATTATT
TTTTCAATTTTCGGGATTCCGGAATTCAGCAACCCCCCCCCCCTATAGAT
CGATTCGACAAAATCCAGTTGGGGACTCCAAACAAACCTCAAGCAAGCTG
CCTGTTCCTAACTGACAAAAGTTTCACCCACAAAACGATAAAACTAAACG
GGGCTAAACGGGAAATATTTGAAGATTTTTGAGCTATCAAGGAATTACTA
AATCATCCTGTAGATATTCTTTCTACCATTTCTTAGAAAAGATGGCTGAT
CGTGGGTGAAAATGACGTCACACGGAATCGGTCTATTGGGTAAAAACCAA
TAAAATAAAATACGTTCTTTTTATTATGACAGGTGGTACATTACACGACA
AACGGTCATTATCATGCACACCACGATAGTGAGACACACTTAAGCGATCA
TGTTCCTTGTTGTCATCAATACTCTGGTGATACTCTGGGAAGCACTGGTG
AATGCAAGTTGTGCAGGTAGGTAGTGTCTGTTTCCCCATGGGTAATCGAC
AAGTGAGAGAGGATTTCTTTTGCACTGTAAAATTGAGACAAGCTGGAGTT
TTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAA
TCTCATTACTTTTTCTAAAGAACGCGTCATCTTTATCACTTTAATTGACC
AATTAGTGAAGTATCTTGTAAAAGCTCCAGCTCATCCCGTAAAATTATCT
ATTCGTAATACAAAGAGATCATCGCTGTGTCATCAATTCTGCTACAAAAA
TTTTGCCCCCTCCTGTTGTTTACACTACTGATACATCGTTGCATATTAGT
TGGGACATTTAAAGTCTAAAAAGTTTGTAGTCTAAAGCTAAATTTGTGCA
AATGTTGGTATCGGGCTACTTCTCATTGAATTTTATAAGCTTAAAATAAC
TCCATCATTGTGAAATATTAAATCGTTTTATCCAAGTCATCAGGCTAAAA
AAACAGTGACCCCCAAAAATATCTGAAGAAGATTCTTGCAACTTTCTTGT
TCACAACACGTGGTTGCATCTTATGATGTTACAGATCCTAAGGGTCGCAG
GGTCGCCCCTTACTAAAATAGACATGTTAATTATGGCAGAACATTGTTTT
GTCAGGCTCAAGTTTTACCATGTTTTACTCCTGTTTTGGTTTATAGTCAT
AAGACCTGAAGAGCTTGTAATGATTATAACTGAAAATATAATTTGTTTTT
TGACAGGTTTTTGACATTCATGATGTATCTAAATGATGTGGAAGATGGAG
GACAAACTGCTTTCCCAATGGCTCATGAAGAAGTCTTCGATACTGACGTG
AGATTACTTTAGATACTAAGCTACGATACATTTTTTACAAATATGAAGCC
GTCACAACGTCCATACAATGTTCATAAGATGGATTGGGTGTAATGTCTAG
GTAACAATTAATAGGGGAAAATTTGGCTAAGCAATTATCCCAGAAAGTTT
TTTTTGTTTCGGCAAAAATCATTGTTCGCCAGAGGACTAAATAACTGACA
CTTGACTTCCATTAACTTATTATCATCGGCGTTGTGAAAATCTTTTTTTA
CAGCAAATTCGTCAACACGGTAACGCAAGTACTGATAAATACAATCTCTC
ATACGGCTGCAAGATTGCTAATCTAGTTGTCAAGCCGAAGAAAGGAAAAG
CTGTTTTATGGTATAACCATTTGGTCAACCAAACCGATGGATGGATGGGC
GAGTTAGATCCATTTAGTTTGCATGGTGGATGTGATGTGAAAAGTGGGGA
AAAATGGATCTCCAACATGTGGATTACAGCTCCCTTTGGGAAAGATATTC
AAACACCGAGTATATTTTTGAATAGGAAAGACTTTAAAATGGCTGAAGAG
AAATTCAAGGAACAAAATAAAAAAGAAGAACGACAAAAAGAAGAATTATA
A Coding sequence (CDS) from alignment at sc0000031_pilon:642898..650798- >XLOC_045282 ID=XLOC_045282|Name=XLOC_045282|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2634bp|location=Sequence derived from alignment at sc0000031_pilon:642898..650798- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGGGGCGATTATTTTGTTGATATTTTGCACTTGGAATGAACAGTT
TTCGTATGTGTTCGGAGAAACAAGCGACATTGGTTATGGGATGCTGACAA
GAAGACAGGGAGTCGAGATGTATGGGGCGATTATTTTGTTGATATTTTGC
ACTTGGAATGAACAGTTTTCGTATGTGTTCGGAGAAACAAGCGACATTGG
TTATGGGATGCTGACAAGAAGACAGGGAGTCGAGCTTGATCACAAAGAGA
TTGTCGATCTTGGAAATGGAAAACGAGTAGAAGTTATAACCAAAGCATTG
AAGCCATTACTGTTTGCTTGATCACAAAGAGATTGTCGATCTTGGAAATG
GAAAACGAGTAGAAGTTATAACCAAAGCATTGAAGCCATTACTGTTTGAG
ATTCCAGACTTTCTATCTGAAGAAGAGTGTGATCATATCATCAAACGAGC
CCTGGATCCACAAGAAGGTGGAATTAAATTATTCGACAGCCAGGCTAAAG
GAGGATTGACTTCTAATGAAACACTCAAAGCTGTTGGAGAGATTCCAGAC
TTTCTATCTGAAGAAGAGTGTGATCATATCATCAAACGAGCCCTGGATCC
ACAAGAAGGTGGAATTAAATTATTCGACAGCCAGGCTAAAGGAGGATTGA
CTTCTAATGAAACACTCAAAGCTGTTGGAGTTAATGGTCAATCATTAGGA
TGGCTTGGTCGCTACGAAGGTTGGGATAAGGATGGCGATGGAAACATTAC
AATCGAAGAGTTAATGGTCAATCATTAGGATGGCTTGGTCGCTACGAAGG
TTGGGATAAGGATGGCGATGGAAACATTACAATCGAAGAGATCATCTCGA
TTGCACATTTAACAAAGACTTTGGTCATGGAAGAACCCGATATTCGAGAT
ATATCATCTCGATTGCACATTTAACAAAGACTTTGGTCATGGAAGAACCC
GATATTCGAGATATATTTAAAGCTGTTGGACAACCAAGCATCCTAGATGA
TGATTTAAAGCTGTTGGACAACCAAGCATCCTAGATGATGATATAATTAC
AAAAGAAGAATTTCAGTTGTTGAGCACATTAGCAGTTGAGAAATATCTTG
ACAATTTATGGCAAAACCATCCACGTTTCAAACCAAGGACCAGTCAACAA
GCATGGTTATTCATGGAACAATGGCTTGACCCTACAGTGCATAACATCAG
AGAAAGATATAATTACAAAAGAAGAATTTCAGTTGTTGAGCACATTAGCA
GTTGAGAAATATCTTGACAATTTATGGCAAAACCATCCACGTTTCAAACC
AAGGACCAGTCAACAAGCATGGTTATTCATGGAACAATGGCTTGACCCTA
CAGTGCATAACATCAGAGAAAGATTGGTACGATTAAGTGGATTACCAAGA
GAAATTATATACGGTGGTGAAATGCTACAGATTGGTACGATTAAGTGGAT
TACCAAGAGAAATTATATACGGTGGTGAAATGCTACAGGTGGTACATTAC
ACGACAAACGGTCATTATCATGCACACCACGATAGTGAGACACACTTAAG
CGATCATGTTCCTTGTTGTCATCAATACTCTGGTGATACTCTGGGAAGCA
CTGGTGAATGCAAGTTGTGCAGGTGGTACATTACACGACAAACGGTCATT
ATCATGCACACCACGATAGTGAGACACACTTAAGCGATCATGTTCCTTGT
TGTCATCAATACTCTGGTGATACTCTGGGAAGCACTGGTGAATGCAAGTT
GTGCAGGTTTTTGACATTCATGATGTATCTAAATGATGTGGAAGATGGAG
GACAAACTGCTTTCCCAATGGCTCATGAAGAAGTCTTCGATACTGACGTT
TTTGACATTCATGATGTATCTAAATGATGTGGAAGATGGAGGACAAACTG
CTTTCCCAATGGCTCATGAAGAAGTCTTCGATACTGACCAAATTCGTCAA
CACGGTAACGCAAGTACTGATAAATACAATCTCTCATACGGCTGCAAGAT
TGCTAATCTAGTTGTCAAGCCGAAGAAAGGAAAAGCTGTTTTATGGTATA
ACCATTTGGTCAACCAAACCGATGGATGGATGGGCGAGTTAGATCCATTT
AGTTTGCATGGTGGATGTGATGTGAAAAGTGGGGAAAAATGGATCTCCAA
CATGTGGATTACAGCTCCCTTTGGGAAAGATATTCAAACACCGAGTATAT
TTTTGAATAGGAAAGACTTTAAAATGGCTGAAGAGAAATTCAAGGAACAA
AATAAAAAAGAAGAACGACAAAAAGAAGAATTATAACAAATTCGTCAACA
CGGTAACGCAAGTACTGATAAATACAATCTCTCATACGGCTGCAAGATTG
CTAATCTAGTTGTCAAGCCGAAGAAAGGAAAAGCTGTTTTATGGTATAAC
CATTTGGTCAACCAAACCGATGGATGGATGGGCGAGTTAGATCCATTTAG
TTTGCATGGTGGATGTGATGTGAAAAGTGGGGAAAAATGGATCTCCAACA
TGTGGATTACAGCTCCCTTTGGGAAAGATATTCAAACACCGAGTATATTT
TTGAATAGGAAAGACTTTAAAATGGCTGAAGAGAAATTCAAGGAACAAAA
TAAAAAAGAAGAACGACAAAAAGAAGAATTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:642898..650798 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 970-1317:349 |
| Aaloc | 880-969:695 |
| Aaloc | 745-876:1570 |
| Aaloc | 688-744:2444 |
| Aaloc | 523-684:2976 |
| Aaloc | 484-519:3558 |
| Aaloc | 421-480:5093 |
| Aaloc | 343-420:5733 |
| Aaloc | 202-339:6555 |
| Aaloc | 118-198:7009 |
| Aaloc | 1-117:7902 |
|
