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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:510735..517142- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045280 ID=XLOC_045280|Name=XLOC_045280|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6408bp|location=Sequence derived from alignment at sc0000031_pilon:510735..517142- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCCTTTGAATTGCATTGAGCTAACATTAAAGACACCAAATCAAAG
GATCAATGATATCCAACTAAAGTGTAAAGAAGATTGGACCATCAAAAACT
TAAAGGAACACTTGCAAGATGTTTATCCTTCAAAGCCGGTATGTGTTAAA
ATTTCCTCTTTCCCCTGTTAGCTTTTGATGATTTTAAATCTTCTTAGAGA
GTTCTAAAGAAAGATGTGCATACAATTAGACCTCATTCACCCTTCCATGT
TCTTCCTGGCTGTTTTTTCAGTACAAAATGCAGTTTTTATAGCTATCTCT
TGTGACTTGTGTGTAATGTAAAAAATACTGTCAACTGCTCCAACTTGCCT
TGGGACTACCTGACAAAACATGGGACGGCAATTTGGCCAGGCAAAACGAT
GAAGCATTCATCATGTCACTTGCGCGGCAAGTTCAAGAGCAGCCACCGGC
AGATTTATTTGAAATATCTGCTCTTTTTTTCTAGGAGTAAATTTTATGGA
TAAATCTAGGAAAGACTTTCCTCAAAACGCCCAGGTAAAATCCAGGGGTC
GCCTTAAAGACATCTGTTCTTAAAATTCAGGAGCATGTTTTAAAGAAAAG
CACATGCAATTTTGCAGCGGAAAATCCAGGAGCTAAAATTGTGAAAAACA
CAACCCAGATGCCAGATTTTTTTTTCCAAGGAGCTTCATAATTTTCATAA
AAGGTCTCACTTTCTAGGAGCATTTTAACTTTCTTAGAAAATAGCTGTTA
TATATTTTTGCAAGTTACACACTCGTTATTAGTTAATCCCATTGGGCGCT
AGGCGGTTAGGCAGCGGGCGTTCTCTAATTCTCCAATCTGCGTCCGGTCA
TTTTGAATGAAAACAAAAAAGTTAAAAAGGGCGCGCTATCAGTGAAAGTT
ATTGTGACATGTTATGACAGAAAGTATGATTGATAAACTTGGAAGAGTTA
TCAAAACAAATTTGTTGTCAAAGAGATTTAACAGTAAGTGAAAATACAGG
CTAGATATCAACAGTCCCATGTTTCGACCAATCATCCCAAGTTAGAACAG
TTGACGGTAGGAGTTTAAGCTTAAATTGACTTATGGTTTTTGATGCTACA
ATCTTTTAAACTCCAGAAAAGTCTAGTTCTACTTTGCAATCTTTCTGAAT
AAAGTGCGCATGCACTGAAATTTAAAATCAGTTGGGAAAATACACGTTTT
TTATGAGCCTTAACTTGGCTCCGAGCCTGGAGTTCTTTATTTTTCAAGAA
TGTTTCAGCCTCAAAGTTCCTTACTTACTAAGCTGCTAGTTTCGAATTTT
TCAGTTGTAAATTTTTTCTGAGGCTGAAATCTGCCTCACAGGTCAATACC
CGTCCTGTTTAAAATCAGATTATAAAAATACAGGACAAGTCTGCTGTCTA
GAGCAGTTCCTTAACAATTCCTTATTTTTCGGGCCATTTTCAGCCTAAAG
TTCCTTATAAACATGTTCCTTATAAAGAAACGTTTAGGTATCTTTAATCC
CCCACCCAAATTGTTTCTGCCTTAACTGCGTTCACTTTCTATTGCAAAAC
TTAGTCATGGGCACATGATTGACTTCTAGGCTTGAAAGCAAACCTGGATG
AAATGAACTGACCAACAACAGTGCCTTGTTTTTATTCTGTTTAAATTAAA
GGCTGCTACACACTCAGCATTTTATGGTCGGCGAACAAGATACACGGCTC
AGGCGCTTTGGTCGCTGTACGCTTTTCTCATTCCACTCTGCAGCACATGT
TTTTCTCTCTTCTTTTGTTTATCATCTTTTTGCACATGATACACATCTTT
TGCACACGAGACAAGAAAAAAATCTCTCTTCTGATTGGTTGATTTGATAA
AAACAAAGGGTGTGCTGTTCAGCTTCGCGAAAAAAGTTAAAAGTTTCAAC
TCTTGTTGCGCTCAAAGCAAACGCCTTTGAAGGCTTGAATTATGTAATTT
ATTCAATAATTAAGCCGTGCACCTTGTTCGACGACCATAAAATGCTGAGT
GGGTAGCAGCCTTTAATTTAAACAGAATAAAAACAAGGCACTGTTGTTGG
TCAGTTCATTTCATCCAGGTTTGCTTTCAAGCCTAGAAGTCAATCATGTG
CCCATGACTAAGTTTTGCAATAGAAAGTGAACGCAGTTAAGGCAGAAACA
ATTTGGGTGGGGGATTAAAGATACCTAAACGTTTCTTTATAAGGAACATG
TTTATAAGGAACTTTAGGCTGAAAATGGCCCGAAAAATAAGGAATTGTTA
AGGAACTGCTCTAGACAGCAGACTTGTCCTGTATTTTTATAATCTGATTG
TAAACAGGACGGGTATTGACCTGTGAGGCAGATTTCAGCCTCAGAAAAAA
TTTACAACTGAAAAATTCGAAACTAGCAGCTTAGTAAGTAAGGAACTTTG
AGGCTGAAACATTCTTGAAAAATAAAGAACTCCAGGCTCGGAGCCAAGTT
AAGGCTCATAAAAAACGTGTATTTTCCCAACTGATTTTAAATTTCAGTGC
ATGCGCACTTTATTCAGAAAGATTGCAAAGTAGAACTAGACTTTTCTGGA
GTTTAAAAGATTGTAGCATCAAAAACCATAAGTCAATTTAAGCTTAAACT
CCTACCGTCAACTGTTCTAACTTGGGATGATTGGTCGAAACATGGGACTG
TTGATATCTAGCCTGTATTTTCACTTACTGTTAAATCTCTTTGACAACAA
ATTTGTTTTGATAACTCTTCCAAGTTTATCAATCATACTTTCTGTCATAA
CATGTCACAATAACTTTCACTGATAGCGCGCCCTTTTTAACTTTTTTGTT
TTCATTCAAAATGACCGGACGCAGATTGGAGAACTAGAGAACGCCCGCTG
CCTAACCGCCTAGCGCCCAATGGGATTAACTAATAACGAGTGTGTAACTT
GCTGGGCGAGTGGCGTCAAACGCTCCATCGTTTTGCCACTAATTTGGTCT
TCTTCGTTCCAGACATTCGCGTGTTTTCCACTTCGAATTTTTTTCTTCAT
ATTTTTGATTAAATCTCTAAAAAAGGGTGTCATAATTAGATGAAGGATCC
TAACATTAGATGGTTCTAATCAACTGGTTCATTTTTACACCTCATCTAAT
GAAAATGGAATTAAAACATTACAGTAGTTTTGAAAGTTTGTGTGGTTGTA
AGCTATTGTGGTAAATTAGCTCCCCTTTACTTTTGCAATGTAAAAATTGA
AAGAAATGACCTTTTATTGAAAATTAACCGTCTCAATTGTTCTGGTTTAT
TGATCAATCATACAAAAGCAGATTAGTCCTATGGGGGTCTCCTTTTCATC
GTTCCAAATAGTTTTAGTTTGATGCTTCGCCAGTGTGAAATAACATTTTG
AATGTTTTGATGTTTTAGAATCCCATTGACAAACCTTTATGGAAAGTCCT
TATAGACGATTTTTCTTAACCAACAGTTGCATGGTATTATTAATAAACTG
TTTTTTCTTTATAGAAATGGAATTCACAAAAGCTAATTTATCTTGGTAAA
TTGCTTCAAGACGATCATGCACTGATAAAAGAGGTCTTTTCTGTAAGTAT
TATTAATGAAGTATATAATTTTACTAGTTTTTATTAGGGAAATGGAAAAA
TGGAGACTCGATAGCTATTAATATATATGTAGCCCTATTCTTCTTAATAT
TTAATTCTCCTATTACAGTATATAAATGTTAAGATGAATGTAGCAAATGA
TTATAGTTGTTTTAGAGAAAGTGACGGACTATTGAATAACTAATTACTCC
ACAACAGTTACCTAGAGACAAGATCATTTATCACTTTTTATTGGCTGAGG
GAAAGTAATGTATGTGAAGTAATTTGTTATTCAATAGGCCGTCGCGTTCT
CCAAAATAACTATTGTAGAGCCCTAATCCTAGATTCATTTCCCAAACTTT
GTAAAACCCCATCAGTTATTAAGCCTATTACTTTGAGTTAATACCTCATT
CTTTTAAATGTCGCCTCAAATAAATGACCTTCTTTTATAGAAAACTTTGG
AAACTGCCCTCAAATAAACACGCCTCTTCTTTTTATGTATTGGAACTGAT
TTTTGCCTGTTGCTACATCCCTAAAATGGCATATTTCTATTGAAGTTACC
TTATAGTTCTAAACTATTAACTTAACCCCCCTCTTTTAACCATCTAAGAA
ACACTGTGGTATTTATTTGAAGTAACACGGTATTAGCTTCGTCGTATATA
TGAATTTTTATTTTTTTAGAGCTGTGCAAGAACATTCCATCTAGTTTGTC
ATGAAACACAAACTGCAGAATATATTCCTTCACAAACACCCTCTCAGAGT
CCAGTAAGTACAGTAAGTTTGTCCTATTACTTTTCCATGTTTGACCTCAA
TAGAAAATCAAATCTTAATTTAATGGCCGCTCTCTTATACAAAGCTTGAA
AATTATGCACAGTGTTTGAAAAATATTGTCGATGCATAGTCAGAAGAGAA
TTGCATTAATGTCTTGATTTCAGGCTTTTAGAAAGATCAATAACGACTTC
CTCTGTAGTTTGAGTCATATACTTGACTGTACTTGATTACCACATAATAT
TTTGCCAGAGATCTCTAAATAAAATTCAACAAAATCGATAAACATAAATT
GGTCAAACAGGGTTACAGTGTGGAATACAATCAAATCAAAAATGTATTTT
TATTTTTCAGCCCACCCAAAGTTCTGACACTGCTACCTCCTCTTCCTCAA
TGCCCACAACGACAGATACCACTGATGGATTAAGGTTCAGAGGTACTCAG
CAAGCACAACCAAGGTCAGTCAATTTTGTTATTACTTGAAAGAAGATTGT
CATTAACTTTTAGATTAGTCCTGCTCCTGTAAAACTGAAAATGCAAGCTA
GTTCATAAATTGTATTCAAATCAAAAGCTATGAATGTCAGTGAACTCTGT
ATATTATTTAACCTCGATAGAAGCACTTGTGTATTCCATTACTACAAAAT
CATTCTCAACAGAGAGAGATGCTCTCAAACTTGAATGTCACTTTCAACCA
AAAAGTGTAGTACCAAACATAGTACATATTTCTTTTACAAAATAATTCTC
GAGCACGAATTTCACTTTAAACTTGAAAGAGTGGCAATGAGCAATTGTTT
TTTATTTCTTTAAAACTTCCTAGCTCTGAGCAACACCAACCGTCTCCATC
AATGTCACCATCAATGTCACCATCACCTTACAATTTTCCGATCAATATGC
AACAATACCAACAGCTGAACCCACAACAGCAATATCAATTACAAATGCAA
CAATATTACATGCAAATGCAGCAATGGCAATATGCAATGTCTACCGGACA
ATGGCCCTACCAACAAAAGTAAAACTCCTTTTAACAAATGAATTTTGCAT
AGCATCTCTCAAACTAAATTCTCTCTTTCTCCATTTTCCTGAAGTCTTAA
ACAAGAGGTCGATTTTGTGCTTTTCTCTTAATATGTTAAAAAAAAATTTG
TTAGAAACTTTTATTCCTTTTCAGTAGTCAGCCTGCAACACCTTCTTCAT
TCACTGCTACTCCACCAGCCACACCGCTTTCTCCACAAGAGCAACCACAA
CCACAAGCTGCACAACCTGCACAACCAGAAGCCCCTCAACCGGCACCACA
GCAACGTCCACAAAATGTTCCCATGAATGCCGGCCCAGGCGGTGCCATGA
TACAAGATGATAATGAAAATGGACAGAATCGTGATTGGTTGGATGTGTTA
TACATGTCAATGAGAGGATTGATGTTATTGAGTATCATATATTTCTATTC
TTCAACTAGTCGCTTCTTGCTGGTTACTATATTGGGTTTCATTGTTTACA
TGTACCAAGCAGGATGGTTTACAATGAACAGACCGAACCCACCTCAGGAA
CAAGGTTTGTTGGTAGTTTTTTTATCAAACTTCATGTTTTTGCTAAGTAA
TTATAAACTTTCCTCTATCGGGGAGTGTTTTGGAATTTTTGAAGCTAGTT
GGGATATGTATATGTTGATAGGGGTTGAAATTTCCCATGTAATCACGGAA
TATATATTGTAAAAGTTTTTTTTTTTTTTCTAAAAATTTTTGACCTGACC
CGATATTTACTTGGAATGATCTTGAATACTTTACAGTTTTTCTGTCGGCT
TTCTTAGGTCTCTTCAAACAGCTTACTTATATTATTATTAACATATCAAT
ACTCCTATTTTTCCAGATGCAGCAGCACAGAATAATGTTGACCAACCAGA
TGGAGAAGGACATCAAAACGAAGAAGAAGAAGGAGAACAAGATGAACAGA
ACAATACAGAACAAGATGAGAACAATACAGAGAACAATGAAACCAACGAA
ACCATTGAACCTCCTTCTCCAAGTGTTTTTCGAATCTTTTGTACTTTCAT
TGTATCTTTTGTGACCTCACTCATTCCTGCTACTCCCCCACCACTTCAGC
AGAATTAA Coding sequence (CDS) from alignment at sc0000031_pilon:510735..517142- >XLOC_045280 ID=XLOC_045280|Name=XLOC_045280|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2460bp|location=Sequence derived from alignment at sc0000031_pilon:510735..517142- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCCTTTGAATTGCATTGAGCTAACATTAAAGACACCAAATCAAAG
GATCAATGATATCCAACTAAAGTGTAAAGAAGATTGGACCATCAAAAACT
TAAAGGAACACTTGCAAGATGTTTATCCTTCAAAGCCGATGGATCCTTTG
AATTGCATTGAGCTAACATTAAAGACACCAAATCAAAGGATCAATGATAT
CCAACTAAAGTGTAAAGAAGATTGGACCATCAAAAACTTAAAGGAACACT
TGCAAGATGTTTATCCTTCAAAGCCGAAATGGAATTCACAAAAGCTAATT
TATCTTGGTAAATTGCTTCAAGACGATCATGCACTGATAAAAGAGGTCTT
TTCTAAATGGAATTCACAAAAGCTAATTTATCTTGGTAAATTGCTTCAAG
ACGATCATGCACTGATAAAAGAGGTCTTTTCTAGCTGTGCAAGAACATTC
CATCTAGTTTGTCATGAAACACAAACTGCAGAATATATTCCTTCACAAAC
ACCCTCTCAGAGTCCAGTAAGTACAAGCTGTGCAAGAACATTCCATCTAG
TTTGTCATGAAACACAAACTGCAGAATATATTCCTTCACAAACACCCTCT
CAGAGTCCAGTAAGTACACCCACCCAAAGTTCTGACACTGCTACCTCCTC
TTCCTCAATGCCCACAACGACAGATACCACTGATGGATTAAGGTTCAGAG
GTACTCAGCAAGCACAACCAAGCCCACCCAAAGTTCTGACACTGCTACCT
CCTCTTCCTCAATGCCCACAACGACAGATACCACTGATGGATTAAGGTTC
AGAGGTACTCAGCAAGCACAACCAAGCTCTGAGCAACACCAACCGTCTCC
ATCAATGTCACCATCAATGTCACCATCACCTTACAATTTTCCGATCAATA
TGCAACAATACCAACAGCTGAACCCACAACAGCAATATCAATTACAAATG
CAACAATATTACATGCAAATGCAGCAATGGCAATATGCAATGTCTACCGG
ACAATGGCCCTACCAACAAAACTCTGAGCAACACCAACCGTCTCCATCAA
TGTCACCATCAATGTCACCATCACCTTACAATTTTCCGATCAATATGCAA
CAATACCAACAGCTGAACCCACAACAGCAATATCAATTACAAATGCAACA
ATATTACATGCAAATGCAGCAATGGCAATATGCAATGTCTACCGGACAAT
GGCCCTACCAACAAAATAGTCAGCCTGCAACACCTTCTTCATTCACTGCT
ACTCCACCAGCCACACCGCTTTCTCCACAAGAGCAACCACAACCACAAGC
TGCACAACCTGCACAACCAGAAGCCCCTCAACCGGCACCACAGCAACGTC
CACAAAATGTTCCCATGAATGCCGGCCCAGGCGGTGCCATGATACAAGAT
GATAATGAAAATGGACAGAATCGTGATTGGTTGGATGTGTTATACATGTC
AATGAGAGGATTGATGTTATTGAGTATCATATATTTCTATTCTTCAACTA
GTCGCTTCTTGCTGGTTACTATATTGGGTTTCATTGTTTACATGTACCAA
GCAGGATGGTTTACAATGAACAGACCGAACCCACCTCAGGAACAAGTAGT
CAGCCTGCAACACCTTCTTCATTCACTGCTACTCCACCAGCCACACCGCT
TTCTCCACAAGAGCAACCACAACCACAAGCTGCACAACCTGCACAACCAG
AAGCCCCTCAACCGGCACCACAGCAACGTCCACAAAATGTTCCCATGAAT
GCCGGCCCAGGCGGTGCCATGATACAAGATGATAATGAAAATGGACAGAA
TCGTGATTGGTTGGATGTGTTATACATGTCAATGAGAGGATTGATGTTAT
TGAGTATCATATATTTCTATTCTTCAACTAGTCGCTTCTTGCTGGTTACT
ATATTGGGTTTCATTGTTTACATGTACCAAGCAGGATGGTTTACAATGAA
CAGACCGAACCCACCTCAGGAACAAGATGCAGCAGCACAGAATAATGTTG
ACCAACCAGATGGAGAAGGACATCAAAACGAAGAAGAAGAAGGAGAACAA
GATGAACAGAACAATACAGAACAAGATGAGAACAATACAGAGAACAATGA
AACCAACGAAACCATTGAACCTCCTTCTCCAAGTGTTTTTCGAATCTTTT
GTACTTTCATTGTATCTTTTGTGACCTCACTCATTCCTGCTACTCCCCCA
CCACTTCAGCAGAATTAAATGCAGCAGCACAGAATAATGTTGACCAACCA
GATGGAGAAGGACATCAAAACGAAGAAGAAGAAGGAGAACAAGATGAACA
GAACAATACAGAACAAGATGAGAACAATACAGAGAACAATGAAACCAACG
AAACCATTGAACCTCCTTCTCCAAGTGTTTTTCGAATCTTTTGTACTTTC
ATTGTATCTTTTGTGACCTCACTCATTCCTGCTACTCCCCCACCACTTCA
GCAGAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:510735..517142 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 991-1230:241 |
| Aaloc | 610-987:934 |
| Aaloc | 415-606:1285 |
| Aaloc | 310-411:1749 |
| Aaloc | 217-309:2190 |
| Aaloc | 139-216:2945 |
| Aaloc | 1-138:6409 |
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