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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:204296..210209+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045271 ID=XLOC_045271|Name=XLOC_045271|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5914bp|location=Sequence derived from alignment at sc0000031_pilon:204296..210209+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGAATGGTTATTTCAATGTTATCCTGTTCCTAAAGAAATCACACGT
AGAAATAATTGGTGAGCTGGACGGTAAGTTTTTCCCTTCCTCTCAAATGC
AACGCCACTATCTCTCTCAAAACATTCACATTTatgggaaaaatattacg
gTGATGACGTCACACTTGGAAAGTTTAAAAGAAAGCGCAGCAGAGAGACA
AAAACAgttgaaacaatgttttcaAATGATGACGGATTCGCCTTGCGata
caaactttatttttgctgGGGACCTGAATATGAGGGCAGAAGATTTAAAG
AAGGTTGGCGGAATACCGCCTAAAATTACGGACGCATGGGAAACGGCTGG
AGAAAATCTGAATGCCAAGTTCACTTGGGATCTGGAACTGAATGATAATA
AACGGTTTCCGAACTGTAAACCACGTGCACGTTTTGACCGGATGTTTTTC
AAGAGATCACTATCGACTCCGGTTCAATGTATTGGTTTTGAACTGGTTGG
ATTTGAAAGACTGTCGTGTGGGATGTTTCCGAGtgaccattttggaattt
taggcAAATTTATTCTTCCAGATGACTAATGGAGTAgagttttttgaatt
tatttttacattttattttgcgttttagagattatatatttttttatcaa
tcttttatttttaaagaaccATATTCACCTCTTGATCACGTTTATTTTAT
CCCCaataagaaaagtttttattcCAGGTACCATGATCGGAGTGAAGTAT
ACTGTAGTTGAAAGTACATTATATTCAGAATTTCTCTATACTATAGACCG
AATTAGTGAACTTTCAAAACTAGATTAGGAAAAAAGTTGGTGTACACTTA
TCTTTCTATAGCAAGGGACTCCAACAATCATCGAAAGTTGATATTTTCGA
TGACTGATATAAAatgatgtttttatattttagagagtaaatgaaaaaaa
taataaataaatgaagaaagagatCAACGCAGGTAAGACGTAAAGGAAAA
CTAAAACTTTGATAAAAACTTACCCATAATGTTTTTAATAAGCTCAGCTA
GGaagaaattttaagcaattGGACATTACCAACCGAGAAAACACCCTTTT
CAccgatttaaaatttttctttttgttaaagTCCATTTTACAACATAAGT
AACCCTATATATGAGCCAGTTGGTCATTCTTCTATTATCAGTTTTTCttg
tgattggctcattagctttttatgatattttgcatGACGATGctgatgat
ttgattttgttagGATTACTCAAATGGGATTAGTCGACGTAGTTCACAAA
TGTTGATTTTGTTTGATCTTCACTGACCATTATTTTACAGGAAAACGTCT
CGAATCTTTCATTTTACAACAAAGCTCTTGCTTCATATCATCGAATGTAA
AGTTCACAATGATTGAGAAGATAGGGTGATATGGAAGTCCCAACCTCGTC
TACTGCAAAGCGAAAGCAAAGGTTTTTTAGTACCTTGTTGACAAATTTCT
CTTCGCGAACCAATGTTTTGTAAATCAATTTAACCAGATTAGTTGTTCAG
CTCAGTAGAGTAtcaagtaataagattcttggCTTTTTACATATGTTTat
ccaagtttgttttttttgaaatacactattttttttctcttgtcGTTCAA
TTTTGTTAGGGAAGTCGTTGTACTGAGTGATGACGACAATGATAAAGAAG
ATGGCGCCGTCGCTAATCTGCTGGTACCGAAGAAAACCGAAACAGAGAAT
TGCGATGGAGACGATCTTACTCATCTATTGAATGACAAAGATAATGACAT
CATCGTCAACCAACCGGTACCGAAGAAAGCAAAAACAAATGATATTGGTG
GAGATGACCTCACTTATTTATTGAATGACAAAGATGACGACATCATCGCT
AAACAACCGGTACCGAAGAAAGCCCAAACAAATGATAGTGGAAAAGATGA
CCTCACTCATTTACTgaatgatgacgatgatgatttAGCGTTTTATGGAA
TCTCAGTAAGCTATAGCGAGctcctcactaaaaaccgggatttttcatct
cgtttcttagtgagttcagCCATAGTCACAAAGTGCCAACATTCTCTTCT
TGTGACTATGGTTCagctttgacgatttttgaaaaatagaagcctttcaa
gtgttttgacgaaAATTCGATtatttgctactgcaggagcttcgaaagtt
aaaagtgacgtcaaaaaatcgaatgtttagagcccgaaaacccgggctca
aaacattcgaaaaagtcacaaagtggaatagacgttaattgcgtcaaaaa
acgcgggtgacgtctagtataggctaagtAAGCTAaggatatttcaaatt
ttacttaaaGATAAACAATTAATATGCTATACTGCTTTGATTGACCTTGG
TCAATCAACGTGGTATTCTATTTAGTTGTCGATACAATAACACTAAGAGA
GTCCTGTTAtactcactgacctttatataaccctggaccaagcaatatgt
gccatctttgattggagtttttttagaattggtacccaaggagaagccat
tgcaatgctaaaatTTAACGTCTAACgtcgctacatcatcaaaagaattt
gaggaaaagtagacctagcgctctcgatgcatttacaccgctatcgagta
gtgccgacattagggtaccaattttcaaaaaactccgatcaaagatttgg
cttggccgggattgagaagctttgtccggGGTATACAAAGGTCAGTGGTT
ATactatataaataaaaaaattgattggaGTACCACAAACTTTTTTCGTC
AGCGgacgaagacctgaattaaaagCCGAAGACCTGATTCAGCGGTAAAT
AGTAGAAATCTGTGACCGTTAGTTCAGGTCAGGAAAAAGGAATCTGTGGA
GGTATGTGCACATAAAAGTAGCCCCCAGCTGTTATATAACTGTATCATTT
TAATTCGTTAATGATTTTATTATTCAGGCTCAGGAAGATGTTACATCCAA
AGTTTCGTCGTCAGAGTAAGCATCATATTTTGTTAAAACAGAATTCAGTA
caagcttcttttttttataagaatggtgtaaatccatttcatcatgatac
tttaatcgtagaaattttagcgagactaattttagcgttttagcgagttt
ttcctattttcggcgaatcgacagatcgccaaaatttatccacgcgaaat
tcctggttatattgccttgatacatttttatcaataggaaggttttcagt
gcaaagaaatgctagaaaacgaattaaatcaataatgtaataattatgag
tattcgctaaaatttctccacgcgaaattttttgaaatcgtgattcgcta
aaataaatccaaaaaaaatcaagattttcctgactcactaatatacgcta
aaattagtttcgctaaaatttctacgattaaagtattcttaacttttttg
ggaaaatcatcctaaaatattcttacagaattcttaggttaggatcctaa
ttcagactagatttaacatttagtacatacgtctcaagcataaaatggca
tttttgtgaaagaagtgagccttacttggggctaattgacaatttattat
tgaaaatgctttaaaaatgacattcttagcttgagtagcaaaattccatg
atggaattcttagcattattctcaattttttggccattttcattatggac
attctcataaagtgtattcttataaaaaaatgcgtgTACCCTTTTATAAA
GGCTTTTGCTCTGTGTTtcacaaaaatcagtgaaaatcaatttatattaa
taaattaaaaacaacaaatcaagTCTTTTTTCTcgcaaaatgttttgaaa
gctGCATTCGCAAAAAGTAAATTCCTgcgaaatgcaaaaatttcggCAAA
AGCTTTGTTTACGCAAAAGATTTTCCCCTGGAACTATGTTTTTGCAATAT
ACgttcaatatcaaaaatctttttcttgtgCTATAGAGCTCCACCTCAAG
AAGGTTCCAAAGAGTTCACAGTGCTGTCTTGGAACATTGATGGTTTGGAA
GACGAATATTTGATGGAGAGATTCCAAGGAGCTCTGAAAGACATCTTGAA
AAAATTACCGACCATTGTGATGCTTCAAGAAGTTGTTCAACAAACATTCC
TCTCTCTTTTTATTCTCTTCCCGTAAGTCCTAatttctgattttgaaaat
gtCGTGTATTCCTTATCACTTGGAATAACTATTTGCTTCTTTTCAGTACC
CCTCTTTAGAGAAAAGCCGACGGGAAAAGATTtccaataaattttatttt
attgaataaacGTCTTTTCTCTAGAAGGGACGTGAATCTTATAGTTGTAA
GTTACTGTAAGGAAGTTCGTATTTGTCTGATATGACTGGCAATAGCAAAA
CCCAATTGTTTTCGAACCCCTAGTCCCCATTTTGTATGAAGGAGCTGCCA
TCGAAAATCTTATTTATTAGGGTGTTTACTCGCTGACCTTtttataccct
ggaccaagtttctcaattccggccaagcaaaatctttgatcagagttttt
tgaaaagtggtaccctaatggcggcactgaTCAATGTgtaatgcatcgag
agcgctagatctactttccctcgaaaacttttgatgatgtagcggcgtta
aggccggcgcaaatgaatccaacatttccaattcattgttggacgaaatg
ttggacgaaaagtcacgtggaaaaatttgaaaagttgcatgaaaagtcat
ttgcgcaaaaatgtcaaacattttcatccaacacgATTACGCAAATTCAT
ACAACATTGAAACCaacataaaagtgacgtcaatctcattaaaaaatgtt
ggatgaaaagtttGACGGCGATCAAtcttcatccaacatgatttccaaca
attttcttaaaaagttgcaattttaagACTTGCGCAAACGaacccaacat
ttgatccaacaataatgttggatcaaatgttggattcatttgcaGAGGTT
ATTggaacactgcaatggcttctttacgggcaccaattcaaaaaaaaaac
cttcgatcaaagatggcggatatagcttgggccagggatatataaaggtc
agtgggttcACTACATAAAAGCACAATCATCAACTAAGCGAATATAAGTg
aactaaaattttgattcacaagTTCTGTCAGTTGCACTTTCAACATTTTG
ATACTGGGAtcctattgttttcaaaatcacCTTAAAATAATGGGATAAGT
GaaaaaaaggaatataaaaCGCCTTTATACACCTCCAAGTTTACGGACGG
TTCATTTTAGTCTTTACGTGATTCGAACATTGGAGCACGATGGTTATTTC
AATGTAATCATGTTCCTAAAGAAACCGCACGTGAAAGTCATTGGTGAGTT
GGAGGGTTGGCATTTCTACTCTTCCCAAATGGATCGTCACTGTTTGTTAC
AAAAACTATACATTCATGGAAAACCTGTTACagtgatgacgtcacacttG
GAAAGTTTAAAAGAATGTGCTGCAGAGagacaaaaacaattgaaacaatg
ttttgaaacaataacAGACTCGCCGAGCGACAcaaacttcatttttgctg
gTGACTTGAATATGAGGGCGGAAGATTTGAGGCAGATTGGTGGGATCCCG
CCCAAAATTACAGACGCCTGGGAAACGGCTGGAGAAGATCCAAATTCAAA
GTTTACTTGGGATCTGGAACTGAATGATAATAAAAAATTCGGCGGTAATC
GTAAACCACGTGCGCGCTTCGATCGAATGTATTTCAAAAGAGCACAATCG
AATCCAATGCAATGTATTGGATTTGAATTGATCGGTTTGGAGAGATTGTC
TTGTGGGATGTTCCCAAGTgatcattttggaattttaagcAAATTCATTC
TTCCAGATGACTGA Coding sequence (CDS) from alignment at sc0000031_pilon:204296..210209+ >XLOC_045271 ID=XLOC_045271|Name=XLOC_045271|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1164bp|location=Sequence derived from alignment at sc0000031_pilon:204296..210209+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGAATGGTTATTTCAATGTTATCCTGTTCCTAAAGAAATCACACGT
AGAAATAATTGGTGAGCTGGACGGTAAGTTTTTCCCTTCCTCTCAAATGC
AACGCCACTATCTCTCTCAAAACATTCACATTTatgggaaaaatattacg
gTGATGACGTCACACTTGGAAAGTTTAAAAGAAAGCGCAGCAGAGAGACA
AAAACAgttgaaacaatgttttcaAATGATGACGGATTCGCCTTGCGata
caaactttatttttgctgGGGACCTGAATATGAGGGCAGAAGATTTAAAG
AAGATGCAGAATGGTTATTTCAATGTTATCCTGTTCCTAAAGAAATCACA
CGTAGAAATAATTGGTGAGCTGGACGGTAAGTTTTTCCCTTCCTCTCAAA
TGCAACGCCACTATCTCTCTCAAAACATTCACATTTatgggaaaaatatt
acggTGATGACGTCACACTTGGAAAGTTTAAAAGAAAGCGCAGCAGAGAG
ACAAAAACAgttgaaacaatgttttcaAATGATGACGGATTCGCCTTGCG
atacaaactttatttttgctgGGGACCTGAATATGAGGGCAGAAGATTTA
AAGAAGATTGGTGGGATCCCGCCCAAAATTACAGACGCCTGGGAAACGGC
TGGAGAAGATCCAAATTCAAAGTTTACTTGGGATCTGGAACTGAATGATA
ATAAAAAATTCGGCGGTAATCGTAAACCACGTGCGCGCTTCGATCGAATG
TATTTCAAAAGAGCACAATCGAATCCAATGCAATGTATTGGATTTGAATT
GATCGGTTTGGAGAGATTGTCTTGTGGGATGTTCCCAAGTgatcattttg
gaattttaagcAAATTCATTCTTCCAGATGACTGAATTGGTGGGATCCCG
CCCAAAATTACAGACGCCTGGGAAACGGCTGGAGAAGATCCAAATTCAAA
GTTTACTTGGGATCTGGAACTGAATGATAATAAAAAATTCGGCGGTAATC
GTAAACCACGTGCGCGCTTCGATCGAATGTATTTCAAAAGAGCACAATCG
AATCCAATGCAATGTATTGGATTTGAATTGATCGGTTTGGAGAGATTGTC
TTGTGGGATGTTCCCAAGTgatcattttggaattttaagcAAATTCATTC
TTCCAGATGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:204296..210209 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 304-582:5636 |
| Aaloc | 1-303:1 |
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