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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:855787..858966+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045247 ID=XLOC_045247|Name=XLOC_045247|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3180bp|location=Sequence derived from alignment at sc0000031_pilon:855787..858966+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACTTTTCTTCACTGACCTGGAGCAACGAATGCCTTCCATATTCAGTAA
ACCCTTCAAATTCACTAATCAATCATTGTTCTGGCAAAAGAATTTACCAA
CAGCTGATAAAGGGAATAAGTCGTTTCTAACAAACCACCCGCAGTTCAAT
AATACAAACAAAACTAAAGCTTTCACGTCGAACACCAAGGCTATTTCGAA
GAAAGAGTCAACAACAAGTGGTTTTCAATATGAGAAATCTGAAATGGTGA
GCTCGATTTCTACTTGCTCAAACCCAACACAAACGAATAGCTCTAGGCTT
GTTCAAGCAACATCAAGAAATGTGAATTCTAAACCTTTACACTCTACACC
TTCGATCAAGAATTTATCTTTGAATAAATCGGCTGATGAAATGAAAACTA
ACCAACTTCCACCACCAAAAACCATTCAAAACAGTCGTTCGGTAGTAACA
AATGTCACAAACCATAAAAAGACTCTTAAAACCCAACTGTCAACCAAGCC
AtcaagtttgaaagaaatccaTCAAAAACAGACTAAAGCTTTCCCAAAGA
ACTCACCTCTTTTAGGTGGAAACATTATCGATATTCCAGATTCACCATTT
GATCAGCTTGTACCTGAAGAACTGTTACAAAGTAACATGAGTATGAACAA
TGATGAGAATACGCTACTTTACCAGGACCAGAATAATGTAAAGCCGTCCA
ACGATTTTAAACGTAATGAGCAGAATTCGAAAAGTACAAAAGACAAAGAA
TCCAACCAAACGAACGATGATTGTTTTATCAATAAATCAGATTTCTCTTT
GATAGATGAATCAATGTTTGAAGATGGTTGTGATGATGAAGGCCAAGTTG
TACCAGATCAGAGCACCGGAAATgtatcaagtatcaaaacaCTACAAACT
GATCAAGCAAACCTCGAGACCAACTTTACTGAAGGAGTCAAACAGCAATC
TCAACGTGAATCTTCACAGTTCAAACCAATTCAAAGTGATACTGATACTG
ATACTGATACTTCAAGAGTTGTCCCTTCATCAAGTATTTCAAATGCTTTC
GCAGACGATGATATTTTTCCGAAAGGTGACACTGGTGAGTACTGGTTTCT
GTTCGTTAACAAATTAGCTTTTTTCGTACATTTTACTTTGAATGTTAATG
CTTATACGATTTCATTTAAAATAAGCAATTCGACTTGGCGAATACATATC
TTGGGTTTTCAAATTTCCTAGACAAAAAATAATTAGGGGCATGGACCCAT
TCGCCAATTTACTGCTTTgattcaagaacattttattcTTTACTAAACAC
AGCGGTTGGATGCAAAACCCTAATTCAATTTATTTCCATTgaaatcaata
gaccttttcattttgtgtgcaacgactgcctcgttttgaaatctTTGCCA
AAATGATCAACTCCCTTGAGTCTTCAAAcacttcttatgaactcctctgg
gaatcaattatCATTGAAATAGTTTGAAAACGTGGAAAGCGTTGCTCTTG
ACGTAATTGATAAAGAGGTCCATCCCTCAGGGGGAAAATAACAAACGGGC
CTTCGACGCTATAAACGTTTATTAGGAATCTAAAAGTAATGAAATTCAAA
gaccattttcaatttcagttcAGGTTGGCGAGAAGAGAAAAGATATCAAC
GATGGTATTCCTTCTAGTCAGAAACTTGTTCCTCAATTTGGTCGctgtaa
aaagaagaaaaatgtatTCAACGCAACCAAACAGATTTCATCCACACAAC
CATCGTTAACAAACAGGTCTACGGAATCTACCAAAGTTGTTCCTTCCTTT
AAAACGAAAACCAATCTGTTTAAAGCAACGAGCTTTTCAAAGTCGACAAA
AATCATCCCTGAAAAGCGTAAACTGCAGACCACGCATAATGTGAGCTCGA
CAATCAATGCAAAGAAACCGAAAGTCATTACTAAGACTCCGTCCAGCTCT
ACCAAGCCATCTATAATTAAAACACCAACTAACTGCGTACAGAATCGAAA
GGAATTGAACGGTAATATCAGAAACTCACCTCTACCACCAATTCCCTTGG
TCACATCTACAGACGATTTTTCAACCAAGAAGAAGTCTTTCTCGTGTGTG
CAGAAAGAACCATTCACGTCATCACAAGGGCTTTCATTAGCTAATGAAAT
CCTCCGCAATATCTCGAGCAGCCAATCAACAGTCAAGGGAATGAGCGAAT
CACAAGGAAGCAATACAATCCAACAGGTACAAAAACATAGTTCTTTAATT
CGACATCTACCCCAGCGCACACTGAACTCCGTCAAAGTGATGATTTTCTT
GAGGCTTAAGGGGAAGTATATTTTTTCAGCAATTGAGGGTCAAGCTTGTA
AAGTGAGGGTTAGTTAGCCCTATTAATTTTGTTGCTTAGCTGGTAACTGT
GCTGTTGTCTCGACTTGAAATGGTTTTCAAAAGACAATGTCTCGTAAATT
TCTATTGCTCTTTGGTGGGCAGACAGtattaatctttttttattttacga
taGACACCCGACTCGACGGCATCCTTCACAAACAATCAAGCTGCCAAGAA
ACCACGGGCTAAACCAAAGATCAATGAAGATATTAATGTTGAGGAAATGG
CCAGAACTGGAAAAGTTTGTCTTTTGATACTCATTCATCATTTATTACTT
CTTTCTATCTCGAAAactcccgtaataccgtacggACAAAAGTTAGTTTC
TTCACAAATTTCGACCCCTTACAGAACAATCGCTGGGGAAGCCAGAAAAA
CGAAACCCCTTACTTTGACAGTGCCCCCCATGTGTAGTAACACTAATATG
TCAAGTTACTTTCAACCCTGTAACAAGTAATAACCTATATTTAACCGATT
TTGTTCAAACTTTCTGTCCTTAAAGTAGCCATCCTTTGCGGGCCtttttt
ccctcaaaaataaatttttatatcgttttttcatattccaaccaattggt
agttttttgtccatttttaagctttCAAGGCCTTTGATCAGTGAAATAAA
TACCCCTCATGGGGTATCTTCTTGATTTTTCTTCAGCTTTCGAAAGTGAA
TGCTCCAACGCTGAAAAATTGGTTAAGAAGTAAATCAGTGGTTTTCAAAG
CAAGTGAGAAGAAAGATGCTTTGGTGTTGAAAGCCCTTGAATACCTTGGC
ATTCCAAATGGAAATCCTGCCGTATCTTAA Coding sequence (CDS) from alignment at sc0000031_pilon:855787..858966+ >XLOC_045247 ID=XLOC_045247|Name=XLOC_045247|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3906bp|location=Sequence derived from alignment at sc0000031_pilon:855787..858966+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACTTTTCTTCACTGACCTGGAGCAACGAATGCCTTCCATATTCAGTAA
ACCCTTCAAATTCACTAATCAATCATTGTTCTGGCAAAAGAATTTACCAA
CAGCTGATAAAGGGAATAAGTCGTTTCTAACAAACCACCCGCAGTTCAAT
AATACAAACAAAACTAAAGCTTTCACGTCGAACACCAAGGCTATTTCGAA
GAAAGAGTCAACAACAAGTGGTTTTCAATATGAGAAATCTGAAATGGTGA
GCTCGATTTCTACTTGCTCAAACCCAACACAAACGAATAGCTCTAGGCTT
GTTCAAGCAACATCAAGAAATGTGAATTCTAAACCTTTACACTCTACACC
TTCGATCAAGAATTTATCTTTGAATAAATCGGCTGATGAAATGAAAACTA
ACCAACTTCCACCACCAAAAACCATTCAAAACAGTCGTTCGGTAGTAACA
AATGTCACAAACCATAAAAAGACTCTTAAAACCCAACTGTCAACCAAGCC
AtcaagtttgaaagaaatccaTCAAAAACAGACTAAAGCTTTCCCAAAGA
ACTCACCTCTTTTAGGTGGAAACATTATCGATATTCCAGATTCACCATTT
GATCAGCTTGTACCTGAAGAACTGTTACAAAGTAACATGAGTATGAACAA
TGATGAGAATACGCTACTTTACCAGGACCAGAATAATGTAAAGCCGTCCA
ACGATTTTAAACGTAATGAGCAGAATTCGAAAAGTACAAAAGACAAAGAA
TCCAACCAAACGAACGATGATTGTTTTATCAATAAATCAGATTTCTCTTT
GATAGATGAATCAATGTTTGAAGATGGTTGTGATGATGAAGGCCAAGTTG
TACCAGATCAGAGCACCGGAAATgtatcaagtatcaaaacaCTACAAACT
GATCAAGCAAACCTCGAGACCAACTTTACTGAAGGAGTCAAACAGCAATC
TCAACGTGAATCTTCACAGTTCAAACCAATTCAAAGTGATACTGATACTG
ATACTGATACTTCAAGAGTTGTCCCTTCATCAAGTATTTCAAATGCTTTC
GCAGACGATGATATTTTTCCGAAAGGTGACACTGTCACTTTTCTTCACTG
ACCTGGAGCAACGAATGCCTTCCATATTCAGTAAACCCTTCAAATTCACT
AATCAATCATTGTTCTGGCAAAAGAATTTACCAACAGCTGATAAAGGGAA
TAAGTCGTTTCTAACAAACCACCCGCAGTTCAATAATACAAACAAAACTA
AAGCTTTCACGTCGAACACCAAGGCTATTTCGAAGAAAGAGTCAACAACA
AGTGGTTTTCAATATGAGAAATCTGAAATGGTGAGCTCGATTTCTACTTG
CTCAAACCCAACACAAACGAATAGCTCTAGGCTTGTTCAAGCAACATCAA
GAAATGTGAATTCTAAACCTTTACACTCTACACCTTCGATCAAGAATTTA
TCTTTGAATAAATCGGCTGATGAAATGAAAACTAACCAACTTCCACCACC
AAAAACCATTCAAAACAGTCGTTCGGTAGTAACAAATGTCACAAACCATA
AAAAGACTCTTAAAACCCAACTGTCAACCAAGCCAtcaagtttgaaagaa
atccaTCAAAAACAGACTAAAGCTTTCCCAAAGAACTCACCTCTTTTAGG
TGGAAACATTATCGATATTCCAGATTCACCATTTGATCAGCTTGTACCTG
AAGAACTGTTACAAAGTAACATGAGTATGAACAATGATGAGAATACGCTA
CTTTACCAGGACCAGAATAATGTAAAGCCGTCCAACGATTTTAAACGTAA
TGAGCAGAATTCGAAAAGTACAAAAGACAAAGAATCCAACCAAACGAACG
ATGATTGTTTTATCAATAAATCAGATTTCTCTTTGATAGATGAATCAATG
TTTGAAGATGGTTGTGATGATGAAGGCCAAGTTGTACCAGATCAGAGCAC
CGGAAATgtatcaagtatcaaaacaCTACAAACTGATCAAGCAAACCTCG
AGACCAACTTTACTGAAGGAGTCAAACAGCAATCTCAACGTGAATCTTCA
CAGTTCAAACCAATTCAAAGTGATACTGATACTGATACTGATACTTCAAG
AGTTGTCCCTTCATCAAGTATTTCAAATGCTTTCGCAGACGATGATATTT
TTCCGAAAGGTGACACTGtttcagttcAGGTTGGCGAGAAGAGAAAAGAT
ATCAACGATGGTATTCCTTCTAGTCAGAAACTTGTTCCTCAATTTGGTCG
ctgtaaaaagaagaaaaatgtatTCAACGCAACCAAACAGATTTCATCCA
CACAACCATCGTTAACAAACAGGTCTACGGAATCTACCAAAGTTGTTCCT
TCCTTTAAAACGAAAACCAATCTGTTTAAAGCAACGAGCTTTTCAAAGTC
GACAAAAATCATCCCTGAAAAGCGTAAACTGCAGACCACGCATAATGTGA
GCTCGACAATCAATGCAAAGAAACCGAAAGTCATTACTAAGACTCCGTCC
AGCTCTACCAAGCCATCTATAATTAAAACACCAACTAACTGCGTACAGAA
TCGAAAGGAATTGAACGGTAATATCAGAAACTCACCTCTACCACCAATTC
CCTTGGTCACATCTACAGACGATTTTTCAACCAAGAAGAAGTCTTTCTCG
TGTGTGCAGAAAGAACCATTCACGTCATCACAAGGGCTTTCATTAGCTAA
TGAAATCCTCCGCAATATCTCGAGCAGCCAATCAACAGTCAAGGGAATGA
GCGAATCACAAGGAAGCAATACAATCCAACAGtttcagttcAGGTTGGCG
AGAAGAGAAAAGATATCAACGATGGTATTCCTTCTAGTCAGAAACTTGTT
CCTCAATTTGGTCGctgtaaaaagaagaaaaatgtatTCAACGCAACCAA
ACAGATTTCATCCACACAACCATCGTTAACAAACAGGTCTACGGAATCTA
CCAAAGTTGTTCCTTCCTTTAAAACGAAAACCAATCTGTTTAAAGCAACG
AGCTTTTCAAAGTCGACAAAAATCATCCCTGAAAAGCGTAAACTGCAGAC
CACGCATAATGTGAGCTCGACAATCAATGCAAAGAAACCGAAAGTCATTA
CTAAGACTCCGTCCAGCTCTACCAAGCCATCTATAATTAAAACACCAACT
AACTGCGTACAGAATCGAAAGGAATTGAACGGTAATATCAGAAACTCACC
TCTACCACCAATTCCCTTGGTCACATCTACAGACGATTTTTCAACCAAGA
AGAAGTCTTTCTCGTGTGTGCAGAAAGAACCATTCACGTCATCACAAGGG
CTTTCATTAGCTAATGAAATCCTCCGCAATATCTCGAGCAGCCAATCAAC
AGTCAAGGGAATGAGCGAATCACAAGGAAGCAATACAATCCAACAGACAC
CCGACTCGACGGCATCCTTCACAAACAATCAAGCTGCCAAGAAACCACGG
GCTAAACCAAAGATCAATGAAGATATTAATGTTGAGGAAATGGCCAGAAC
TGGAAAAACACCCGACTCGACGGCATCCTTCACAAACAATCAAGCTGCCA
AGAAACCACGGGCTAAACCAAAGATCAATGAAGATATTAATGTTGAGGAA
ATGGCCAGAACTGGAAAACTTTCGAAAGTGAATGCTCCAACGCTGAAAAA
TTGGTTAAGAAGTAAATCAGTGGTTTTCAAAGCAAGTGAGAAGAAAGATG
CTTTGGTGTTGAAAGCCCTTGAATACCTTGGCATTCCAAATGGAAATCCT
GCCGTATCTTAACTTTCGAAAGTGAATGCTCCAACGCTGAAAAATTGGTT
AAGAAGTAAATCAGTGGTTTTCAAAGCAAGTGAGAAGAAAGATGCTTTGG
TGTTGAAAGCCCTTGAATACCTTGGCATTCCAAATGGAAATCCTGCCGTA
TCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:855787..858966 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1813-1956:3037 |
| Aaloc | 1702-1812:2504 |
| Aaloc | 1135-1701:1660 |
| Aaloc | 1081-1125:1615 |
| Aaloc | 988-1077:994 |
| Aaloc | 1-987:1 |
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