|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:797775..801457+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045243 ID=XLOC_045243|Name=XLOC_045243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3683bp|location=Sequence derived from alignment at sc0000031_pilon:797775..801457+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGAAGAAATTGCAAAAGCCGAAGAAATCTAcgcacaaaataaatt
tcaagaagtGTACGAATACCTGTTACAatttaaagattctgaaaatCCTG
AAATCTTATGGCGTCTTGTCCGCGCGACCAGAGATCGCGCCACCATGGCG
GGCGTTAGTGCTGATGATAAGAAGAAGATGATTTTTGAAGGCTTCGAAGT
CTCAAAACGTGCTTTGGAGTTTGGTGACAGTGTCGGACCTTGTCATAAGG
TtagaactttttttttagtccctttctttcttttaatctGGATGAACTTC
ATATATTAAAGGGTCAAATTGCTAGAAGATAGTAAGAAAGTCTGCGACCG
TAGTCGGAGGCAACCTAGAGTTAGAactctctaacctttctcaggcaata
aaaagtgaagccacttatttcccatccagaacgcgcctagaacgcgccgc
aatcatgacgatggattgtatctagcgattcctttgtttttgaggactgc
attttttgaaatctaacgatagattttactttcaatccggcgtgtAAAAA
CAACGCGCCGGCGTTCTGGATGAGAAATAaagtagcttcatttcccatcc
taaaacttctactctagcccttggggcttttaaactcaatgatgaGACCA
CGAGGGTTTTATTTccaaacaatttaaaaaatctttatgtTTTAAAAGGA
CAAATTACTAACAATTTTAACTGTGTTCTTTCAATTCCCACAAATCaaag
acattttctttttctttatatctATCAATAGTGGTACGGTATCATGTTGA
GCCAAACTGGTGATTTCATCGGCAAGAagaaaaagattgaagattctCCA
GCAATGAAGAAACATTTCGAAgtactttcttttttgtctttatCATGACA
GTCTTTGAAGGATGAAAAACCAGTATTAGTTAGTAAAAGGTGTAGGGGAA
ACCGATCCGTTTAAAGAAGTGGTTTCTGTCTAATAAGATTTTTTCTCGGT
GCTTTTCTTACCCCTTTTGCTGTGTTGTCTTTCTTCTCATTAATCTTTAA
GGGACtaagaatttttttggattggtgaaagattcgagttatagagaacA
TCTTAATCTTTCTAACCCTAACTTTCAATCCTAACAGGGAACCAAAgttt
aattcgaattacagaaagattcgaataatagaatatCGAATTAGACAGAT
TGACTGTAATAAAATATCTGTCCCTGATTTTTAATAGAAAGCTGCTGAAT
TAGACCCTAAGGATCCAACAGCTCGTCATCTAATTGGAATGTGGTATGTT
CGTATTTTTCACTTTCCTGCAAAATCAATATGATTTCTATAAGACCGAGC
TTTTATTTGATAACCTCCATAACTAATTCTTAGCTTTTAATATCAAAGGA
ATGAGTTTAAATCTTTATCTAGAAAGAACTTTTACCCCCTATGCTGAGGA
GCTGTGACGTCCAGGTTGATATAGAAAAAAGTCCAGGGAGTCTGGTTTTT
CGAGTGTGAAAATCCAgtgtggtcagtaaaatgaggtggcAAATCCAGGG
TGGTTAATAATGAggttaaaaatccagggtggtcagtataatGAATTAga
aaatccaggttggtccgaaaaatgagaaacaaaaatttaaggtggtcctg
aaaaaattgaaaaaatccagtggggtcacctttcccaaaaaaacCTCCTA
TATATTGAGCTTTAGATTCGTATAGACTTTTAGGTATCATTTTCCAGGAG
TTCGAAGTAACTCCAACTTGTTCAAAAAATGTTTCGacgttctttttttt
caggtgTTTTTCATTCGCTGATTTAGCATGGTATGAACGTAAAATTGCTG
CCGTTGTTTTTGGAAGCCCACCAGAATCCACTTATGAAGAGGTAATACTG
TAATGTTTTAATAACGAGGTCGAATAGCGCAATGGTGCATAGGCTGAaag
catcccctctgatatgttttagTATAGGGGATGcatatcgtgtataaaat
tcccgccCGAGAGTAATTGGGGTAACCTATTTCAACTTTctcaaaaaggt
taagaaatctATTAAGCATTAACCTCTAGCCactcaaatttttaattcat
ttttaatgaaatttaaagatcaCTCATATAAAACCTACTAATCAAGCAat
aaaagtttctaaaactcaaaaacataaAGACTGGGTTGGGGTAACTCTCT
TATGGGAATTTTATGCACTATACGCATCCCATTTATCATATAACATATTG
TACGCATGAATATTCTCTAGTAACCAAATAAATGCTCAAACCGCCACTGG
AATCAGCttcattatttttcagtttttggacGTGGTCCAACTTTTGTTAT
TGTAAAAGAGCTCGAGCCTTAACAAATTAGAATAACTGttaaatatttat
ttcttttcaggCTTtgggacattttgaaaaagcaGAAGAATGTaagtaaa
gtttttattttgtgCAAATCTCCTCCGTAATAGAAACTTATGATAAATTT
TTTCACGTATGTAGCAgggtccatatagtacgtacgcaaaaagaattcaa
atacTTGACACCCATcgcccttgtacgcagagaacaatagaaatgctATT
ACTTAAACAATAGACGTACGCTTTTGCTTACgccctctcccccttcactg
cgtacgtactatatagATGGCCCCTTTATACGTATATGTTTTAATCACGA
TATACACCTCTGCAATGACTTTAacgaaattttaagttttttctctTCGA
TACGTCATTTGTAACCAATCGGCTGGTATAAAAGTGACGGAATGCCAGAA
GATATTTCAGGGGTGCATATCCCGAATAGGCTTGTACCGGAAGGACCCCT
GCTCATCCCGAGGACTCATcccaaaaagtaaaattaaatcactctaattc
gatcttcaaggatccaagaatttttttcgaagTACAGAGTATGATTAAAG
CTACTTTCTAGCTGAAAAAGGtaacaatattttagttcgaactacagaaa
gattcaaacagtaagaggttcgaattagagagagttggatgtagttattt
ttttgtattatgaTTCTCAATCCAATAGCACTGTAtcagatttttctttt
taacgCTCCATTTTCCCTCATAGTAAGTCCATCATTCTACAGCACCAACC
AATACATGTTGGGCTTGGTGAATATGAAGATGGGAAAGAAAGAAGAAGCT
ACAAAATGGTTCAAAACTCTCTTGGACTTCAAAGTTATCAAGGAAGAGGA
TAATGAGGTTTGTTGACATCTTTTAGATGTAGATGTTGATAATTCTAAAA
ATGCTTTTTAGACTCAAGTTTCATCTTAGTTAGCTTTGGATCGTAATCTG
TTTAAGATACATCATCTCGAGTCGAGGTAAAGgttattttattcattaat
tGGCTTAAAAGGGGCGTAAATCAAAAGCTtgattcttgaaatttaaagcT
GAAGTACATTTGAACAATCTTAATGTAATGTGTTTCAAAACCTTTCTCCA
AAATCGATCCCtttctaataaaaatgatgTTCTAAAAACGTGAATTTCAG
TGAAACGACATTTTTTACCAGTTTGGGGGAGTAAGATTATACATTATTCA
AAGATTGTTCatgttcttatgatgttcttatctttttctttcagaatATC
AAAAAAGCTGAGGCACAACTCAAATCACTATAA Coding sequence (CDS) from alignment at sc0000031_pilon:797775..801457+ >XLOC_045243 ID=XLOC_045243|Name=XLOC_045243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000031_pilon:797775..801457+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGAAGAAATTGCAAAAGCCGAAGAAATCTAcgcacaaaataaatt
tcaagaagtGTACGAATACCTGTTACAatttaaagattctgaaaatCCTG
AAATCTTATGGCGTCTTGTCCGCGCGACCAGAGATCGCGCCACCATGGCG
GGCGTTAGTGCTGATGATAAGAAGAAGATGATTTTTGAAGGCTTCGAAGT
CTCAAAACGTGCTTTGGAGTTTGGTGACAGTGTCGGACCTTGTCATAAGA
TGGCCGAAGAAATTGCAAAAGCCGAAGAAATCTAcgcacaaaataaattt
caagaagtGTACGAATACCTGTTACAatttaaagattctgaaaatCCTGA
AATCTTATGGCGTCTTGTCCGCGCGACCAGAGATCGCGCCACCATGGCGG
GCGTTAGTGCTGATGATAAGAAGAAGATGATTTTTGAAGGCTTCGAAGTC
TCAAAACGTGCTTTGGAGTTTGGTGACAGTGTCGGACCTTGTCATAAGTG
GTACGGTATCATGTTGAGCCAAACTGGTGATTTCATCGGCAAGAagaaaa
agattgaagattctCCAGCAATGAAGAAACATTTCGAATGGTACGGTATC
ATGTTGAGCCAAACTGGTGATTTCATCGGCAAGAagaaaaagattgaaga
ttctCCAGCAATGAAGAAACATTTCGAAAAAGCTGCTGAATTAGACCCTA
AGGATCCAACAGCTCGTCATCTAATTGGAATGTGAAAGCTGCTGAATTAG
ACCCTAAGGATCCAACAGCTCGTCATCTAATTGGAATGTGgtgTTTTTCA
TTCGCTGATTTAGCATGGTATGAACGTAAAATTGCTGCCGTTGTTTTTGG
AAGCCCACCAGAATCCACTTATGAAGAGgtgTTTTTCATTCGCTGATTTA
GCATGGTATGAACGTAAAATTGCTGCCGTTGTTTTTGGAAGCCCACCAGA
ATCCACTTATGAAGAGgCTTtgggacattttgaaaaagcaGAAGAATgCT
TtgggacattttgaaaaagcaGAAGAATTAAGTCCATCATTCTACAGCAC
CAACCAATACATGTTGGGCTTGGTGAATATGAAGATGGGAAAGAAAGAAG
AAGCTACAAAATGGTTCAAAACTCTCTTGGACTTCAAAGTTATCAAGGAA
GAGGATAATGAGTAAGTCCATCATTCTACAGCACCAACCAATACATGTTG
GGCTTGGTGAATATGAAGATGGGAAAGAAAGAAGAAGCTACAAAATGGTT
CAAAACTCTCTTGGACTTCAAAGTTATCAAGGAAGAGGATAATGAGaatA
TCAAAAAAGCTGAGGCACAACTCAAATCACTATAAaatATCAAAAAAGCT
GAGGCACAACTCAAATCACTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:797775..801457 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 649-687:3645 |
| Aaloc | 517-648:3126 |
| Aaloc | 484-513:2411 |
| Aaloc | 397-483:1805 |
| Aaloc | 340-393:1238 |
| Aaloc | 250-339:782 |
| Aaloc | 1-249:1 |
|
