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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:691748..695517+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045239 ID=XLOC_045239|Name=XLOC_045239|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3770bp|location=Sequence derived from alignment at sc0000031_pilon:691748..695517+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTTTTATATTGTGGCACCTGTTATCCTCTACGTTATGTACAAGTA
AGAAATTTTTGCCGTGTAAAactaattcttttttattttattttggctga
aattttcagCTTATAACCTTGGTATGAAAATCAGAGCTTTTGAGTGACTC
GGTGAtgatgaaatgtttttttgtacTCTTGTATTTTGGGCACGTGGACC
AGATTCACAATTTGcacaactttttttatttgttcaaTTCCTAATCGTCT
TTAAACATGGTAGAGTAGAAATTCAAAGTAGGTTTTTGTTAACGCCTTTT
GAACACGATTCCCAACCTTTATGACATCATTTATCCCAAAATTTATAGAT
TTGACTCGCTGTCtttttttGATATTCttccaaagaagaaaaaaatacga
aattttgaattaccCTCTTCAACTCGGaacgaaaaatacaaaaatagcaC
AACACTTTCATCTTATGTATGGGACCTAAAATCCGCTGGAAAAACTCCCA
ATTTTAAATGGTCGATCGTAAAGAGATAAAATCATACAACAACGTGTCCA
AATCTTGCCATTTATGTCTTTAtgaaaaatacgaaattttgaattaccCT
CGTCAAAAAGAACTcctaaacaaaagaactgaactGGTTTCTAAATGCCG
TCATCAGAATAAATTTTTATTAGCAAATTATAAGTCTAAAGATTGATCTT
CACGTATATAGAACGTCTCTAGAGAATCATCATTTATATTTATGACCCTA
GGGATTTATtccaattaaattttttttacgatgaaaattttcataatcaT
TTCAAATCATAGCATTTGTCATTTTCATTTGATAGCTGAGGATTCGAAAA
AGATGAAACTTGAAGTTCTATaattcatattttgtttttttcttgtacac
tgATCTTCTTCCAATAAAGATTTGAGCACGTGACCAAACCAAAATAATAG
ATTGCCAACGTTTTATGAAAGCAATTCCCCGAGTTTAAAGGCCTTTAAGT
AAAAATCCCATTTCTTCCAATGAACACAGGGTTGAGCAGAAATTCAAGCA
TTCCAAATATCGTATCATTGCAGTGAGTTCTGTCATCATCATTTTATGCA
CAATATGTGTCATCATCAATGCTGCAATGGTTGGTGGATATGATTACCCA
TCACTACTTATCAATGGAAACATCCCTGGTAATCCAAGGCAGTAAggaaa
agtttcatttaaaaaattgtttttaactgATTTCGtgtaattcgaatttc
aaatttttgttgagtTACAATAGTTAATAGCGCTAGACTTGAAGATCGCC
TGTCTAAGACTTTGATGTCCAATTGTattgtttttctattgttttattta
aaaGTATATCAAAAGAAGAATGTTCGGTGGATTAGGCggatttgattgaa
attctTCACaccgaaaatttttatttttgccatcttcaaaattaaattcc
cgctaaaCTTGCCAGCTAAAATGTCTTCCATAAAGTTACTTTGTATTGTA
CAGATTGTCGCGGGGAGAAATTATGCAGTATCTATCGATCTCTTCCATTC
GTTAGGGAGTCCCATCGCATCTGTTTCTTTTAGTATTAAAAACAATGTCT
TCGTTTTCTTCCCTTTCTAGGAAGAGTTACCAAAAGAACCACGATAAGAT
ATATACCAAACCGTACACCAGAATTAATCCGTACTTGGTTGGAATCCTTG
TGGGATATTTATTGGCAAGGAAAGATCAAATCAAAAGAACGGTATGCTTT
GTGAGAACACTGTATTATGAGCACAAAATTAAGCGCAGGATTCTGTTTTT
ATGCGATTTATGTGTTTAAAAAGAAATGGTCCATTGATGAACATTTCCAG
AAGgtaatccgagaaaaatttccagggtgtgttttttttcatttttccaa
ggggatAAAAGACTAAGTTTAGTTCGTTAACCCTGACTTTGaagtatgaa
aataatttttccaagggtatttttgaaacttttatcatttccagggggta
tccacacatttccaaaaattttttttgacttgaaaaggttcctCCACCCC
CCTGCCCCTggatggttttttaatggaacagccaaATACAAGGTTGGCTT
TTAAAAGGTCTAAAATTAGCATACATCGATCCTAATCTAATTAGCTCAGA
TctagtttgagaaaaaaactaatatGAGCACAAAATTGATCGCAGTACAC
GTACCATGCGAGGGTCAATGAAGATCTACTTGGAAATAAAGTCAGCATAG
ATATGTTGTTCTAACTTTCATGTAGCACCAAACGAAAGTTCTATGTCCGc
tgggaaatttcaaaaatacctTCATCATTTCATTACGACCATTTCATCAC
CTCATATTTACAGCTTATCTACATCTTCTTATGGCTCGTAGCGTTCGGCC
TAGGGTACGCCGTAGTTTACGGACCTTACGTGGAAGCGTACAAAGAATTG
CtcgattatctttccaacggttcAAATGTTATGTATGGTGCTTTCCATCG
ATTGGTTTGGGCCATCGCAGTTGGATGGATCGTCTATGCGTGCCAGAATG
GTTTCGGAGGTAACATCTTTCCCGTTAATGCTAGAGAAACTGAATAACCG
GCTAGTATGctttaatataacaatagcgttcagtttgaggtcgttgttgt
tttTTACTGCCCtcgcagtttgattattagcccgagagtgtcatttgggc
ccgacgcgaagcggagggcgcaaatggcactagagggctaataatcaaac
tgcaagagcagaattaatgacaacaacgaacgaaagcttaacgctattac
tattattatccatatcggaaattcaaacaacgttttttttagcgtcagcc
aagtcttttcgcttcaatgcaatgacttcaacaagttttgagtacccttg
cgagtgggccgcaaatgaccaaaaagtgtttttttttgacgtcggtttag
tctcaccgcttcaatgcaacgacttcaataaagttccgagcgggccgcaa
atgacgttatcaccctataaccagggcggttaatgatatttcagccctct
gaagcacgacgccttagttttctcagtgtgggtatgactatttgagcaat
agaacctttcaataccgcccgccgttcgaatctttaatggcttacttaat
gaccgctatatggataataataacaattttCATTGCCAAAATCCTTTTTC
gtaataaaagaaatttttaatgtttatttataGGTTACATCAACAGTTTC
CTGTCGTGGGGAGCCTGGGTACCAATCAGTCGTTTAACATTTGCTGCATA
TTTGGTCCATCCTTTGGTTATCTTTTTCTTCTACGGAATCAGTGAACGCC
CTTATCATTACCAAGATAACATGATTGTAAGTATTGTACATAGGAGGGGA
AGGAGGTGTACATGGGCGTCAGGTGGGCGtctacagatgatgatgaattt
aATTAGCTTTCAAGCTAGTACATATTTGTACACTTTTCTCGGCCTTAAAG
AGTATATACATTAACAAATTTCAGTCTCTCGGAAAAAACTTTTAGTTTTA
CCCCACAGTGATAAaaatttccaccggggctgtgagacaggactGTAAAT
ATAAATTCAAGAAGATTATCACGTTATGAAATAATCATGTTATAATTATT
TGATTGTTTCAGGTTTACAACATGTTTTCCAACATCTTTTGGGCATACGG
ATGTGCATTCATTCTGGCTGTTACTGTCGAATATCCTTCAATGCAATTAG
AAAAACTGCTCATTTCATGA Coding sequence (CDS) from alignment at sc0000031_pilon:691748..695517+ >XLOC_045239 ID=XLOC_045239|Name=XLOC_045239|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1554bp|location=Sequence derived from alignment at sc0000031_pilon:691748..695517+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTTTTATATTGTGGCACCTGTTATCCTCTACGTTATGTACAAATG
CAGTTTTATATTGTGGCACCTGTTATCCTCTACGTTATGTACAAGGTTGA
GCAGAAATTCAAGCATTCCAAATATCGTATCATTGCAGTGAGTTCTGTCA
TCATCATTTTATGCACAATATGTGTCATCATCAATGCTGCAATGGTTGGT
GGATATGATTACCCATCACTACTTATCAATGGAAACATCCCTGGTAATCC
AAGGCAGGTTGAGCAGAAATTCAAGCATTCCAAATATCGTATCATTGCAG
TGAGTTCTGTCATCATCATTTTATGCACAATATGTGTCATCATCAATGCT
GCAATGGTTGGTGGATATGATTACCCATCACTACTTATCAATGGAAACAT
CCCTGGTAATCCAAGGCAGAAGAGTTACCAAAAGAACCACGATAAGATAT
ATACCAAACCGTACACCAGAATTAATCCGTACTTGGTTGGAATCCTTGTG
GGATATTTATTGGCAAGGAAAGATCAAATCAAAAGAACGGAAGAGTTACC
AAAAGAACCACGATAAGATATATACCAAACCGTACACCAGAATTAATCCG
TACTTGGTTGGAATCCTTGTGGGATATTTATTGGCAAGGAAAGATCAAAT
CAAAAGAACGCTTATCTACATCTTCTTATGGCTCGTAGCGTTCGGCCTAG
GGTACGCCGTAGTTTACGGACCTTACGTGGAAGCGTACAAAGAATTGCtc
gattatctttccaacggttcAAATGTTATGTATGGTGCTTTCCATCGATT
GGTTTGGGCCATCGCAGTTGGATGGATCGTCTATGCGTGCCAGAATGGTT
TCGGAGCTTATCTACATCTTCTTATGGCTCGTAGCGTTCGGCCTAGGGTA
CGCCGTAGTTTACGGACCTTACGTGGAAGCGTACAAAGAATTGCtcgatt
atctttccaacggttcAAATGTTATGTATGGTGCTTTCCATCGATTGGTT
TGGGCCATCGCAGTTGGATGGATCGTCTATGCGTGCCAGAATGGTTTCGG
AGGTTACATCAACAGTTTCCTGTCGTGGGGAGCCTGGGTACCAATCAGTC
GTTTAACATTTGCTGCATATTTGGTCCATCCTTTGGTTATCTTTTTCTTC
TACGGAATCAGTGAACGCCCTTATCATTACCAAGATAACATGATTGTTAC
ATCAACAGTTTCCTGTCGTGGGGAGCCTGGGTACCAATCAGTCGTTTAAC
ATTTGCTGCATATTTGGTCCATCCTTTGGTTATCTTTTTCTTCTACGGAA
TCAGTGAACGCCCTTATCATTACCAAGATAACATGATTGTTTACAACATG
TTTTCCAACATCTTTTGGGCATACGGATGTGCATTCATTCTGGCTGTTAC
TGTCGAATATCCTTCAATGCAATTAGAAAAACTGCTCATTTCATGAGTTT
ACAACATGTTTTCCAACATCTTTTGGGCATACGGATGTGCATTCATTCTG
GCTGTTACTGTCGAATATCCTTCAATGCAATTAGAAAAACTGCTCATTTC
ATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:691748..695517 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 670-777:3663 |
| Aaloc | 529-669:3236 |
| Aaloc | 331-525:2364 |
| Aaloc | 211-330:1622 |
| Aaloc | 49-207:1031 |
| Aaloc | 1-45:1 |
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