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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:684780..691354+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045238 ID=XLOC_045238|Name=XLOC_045238|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6575bp|location=Sequence derived from alignment at sc0000031_pilon:684780..691354+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAACAAAAAGATACAAAATGAGGATGTTTGGAAAATTATTGACTATTAC
CACCATTCTGGCAATGATCAGAGTGTCCAATACTCAATTCCCTGATCTTG
GTGATCAGTTCCCAAAGCTTTCCATGGAATGCAATGTACAGCTGTATAAA
CATGGAAAACCGATCTTTGATCTAATGATGCGAACTTCAAATCAAACTGC
AGGAGGTGgtcaaaatataatgaaaacaTTGCTATTGACTCCACTCGGGA
AAAGTAAGTAATCTTTTTTCTTGAACCAGGTATGGCaaaaaaaCGTTacc
aaaattgaaaacttgACGTAGCTCCGTCAGGTTGTCCAAAAAGCTTGAGA
CTATGTGTCGAGCTTAATCGAACttatacttttgaaaaaattgtaagaat
tcgattaaagttcgattatcgaacttaATAAGCCATTAatggttcgatta
agttcgattggtttgattaatGAGGCCTGGAACTGGAATAAAACAAATTC
TACTCAGCTAAAAGATTTAAAGAATTTAGTCTTTAAAGTTACATTCTAAA
GTTATCAAGTGGATCTCATGCAGGTTGAAACTTGTCACGATAAGtggtaa
aaatattatttgttcaATATACTAAACCAAGAGTATCAAGTTCTTTGCTG
ATGCGGTTTAAAGTGACGCGACAAGAttgtaaaataaatttgatattctA
ATAAGTGCATACTTTAGATTTAAAGctatttaaaggatttttttccaatt
atATTTTGGATTGAAATTGACATCCATTTTCTCACGGTTCTCAAAAAATA
CTTCCCGAAAATACCCATCTCGCAATGTACAAGACTCAAAATTGAATATT
ATGTTCTCTGATCTCTCGGAATAAGTCCATACACTATCACCATGCCAAGC
ACCGAAATTCTGCGGATGCATTTTATTGATGCATAGCGTATATATTGATA
CTGACACGATGCTCGGGGATAAATTtccgcggggatttaatttcgcggat
ggcactttTCGGAGGGAgtatttttacgatttcgtgcttttactgccaaa
tcatgcatgttggttgttgaaatacatatTATTAGCGTCTCTTTCCGGGG
CGTTTTGAATCGACCTCCAATATTTTTAAAGATCAATAAACGGAAGGGGA
CAAAAATCGAGAAATTGCCAAACGGAAGGGGTGGGGGGTTCGTTGCATGT
ATTTCTTTCGCCCGTTAAGGCAAAAATTTTCAGGTATTCAGGAATATTAG
GTATTATAGCGCTAATTGTtactaattattttttcatttctcaatTCAGT
GTTGGATTCATGGGGCAAGTTACCAGCACGTGTATTCAATCTTCACACAA
ACTGGATGGGAGCATACGATGAGTGTAAAAGCATGCAGTTCACCAAATAC
TGCTCATCCAAcatgaaaatttataatatgGTATGAACTGTTATTGATTT
TATCCTGTTACCCAATCTTTGAGCCATCATAACTAAGAACGTGGTTTCCA
GGGTGCTTATTAAAATGAAGGAAACGGAATACCTTATCGCTAGAAAATTA
GtcatctaattttttttttcagtctttACCaaacagagaggcatcaagta
ccttttttgtactaagtacgaAGTTTTGGTATGATTCGGCCGGGGGTTGA
ACTCCCCatccttgcgcaccgtagctagATCCTAACTTTTGTTTGTTTGG
TTGACTGAGTTTTCAGATGTTTCGTAACTCGTCACTCTATTTTCGATAAT
TTTAGCTTGACGGTGTATATGGCAGTTGTGTCCCAAAAGGTTGCAGTGAC
AATGACACACATGAAATACTCAATTTCATCTCCAAAAAGTGTAAGAATTG
TTTCTTTGTAGGAAGAAGTCTATCAAAATTTAGCTAGTATGCCCCAATGG
CGGATCTGCGGAGGGAGGGGCGCTCAAAATCATGACAAAGATAACGTTCC
CTTTAATTAGATATATCCCTTATAAGGAAATAAAGAATCtccgtcataaa
ttttgaacccCCTCATATTCATCACTGCACCCCAACACTATTAAGTACCA
GTATAATTTGTGCACCTGTGAGCAGCGAAGGTGACATTTTCAGACCATGG
AAACTTATTTAAGGGTTACTAAAGGCTAATACACTTATCTGATGTATATA
TTTAACTCGTAACATGCTACGCACTTCTTTGAAATATTTGTGTAGGCTTG
CAAGATTGCTTTTGATGTTCTTTTTTGGATTATTTAGACTTGAACAACTA
TCTAACCTTCCCTgacagtggtaaaatttcgtggATTTTTGGCTCGCCAA
CTTATTGTGAAAAACCTGTCAGTTACAACAATGGCTTTTACGTGACTTTG
TAAGTATAGTTAAGAAAGAAATCTTTATAATCCcacttttgattgaaatg
aaCTTTTCCGTCGATTCCCAGGTCATTTTTTAAAACTCTTTTAGCTTTGC
AATCGttttttttCATTGCGCAAAGCTAAATTTCATGATTGAAATTCTGA
TAAATGATGTACATTTTGGTAATGTTTATGTGACTCTCCTCTACCTAGTA
GTACACCAAGAGTTCTACGATTCATTAAAAATCACGACCTTTCCCAAAAT
AGTCAGAGGGTAAAAGTGATGGTTCTTCCATATTATTCCTGATAATAATG
ACGTAATGCCtcatacggaagcacccaaaacaGCCCGGGCGTTTGTCGCG
AAAAGCCGGTCTTTTTatgtgcttccgtataaaacattacgacGTTAGTC
ACCCGACCCTAGGTTTTGGAGGTGGGTCTGTCGGTTGgaaaataactttt
attttggtcattcattgtaacttttgaagaaaaaaaattctcttcgtCGG
AATAGCAATAAAAGTTTTAAGTTCGGCAAGTTTAAAGAACAGTCGGtcgg
tgacggcaaaccaacatttttctAAGTCCAGCCTTAAGAATTTTACGAGT
TTCTCCTTTATAGGGTGCTCAGTAGCATCATACTAGTATTGTGTCTTCTT
GGTTCATTTGTTGATGGCTTCGTGGAACCagttaagattttaaaaacacG
CCGTGAAGCAAATggaattgaaaacaaaggacTGGAAAACGATGATGAAA
AGGTAGGAGCAGTTCCGGTACTTAGGCTAAAttggtgtcgggtatgtgcg
agtcATAAGGTacttttttacaccctcaaaagtccatcaaaggggtacaa
aaaccatgtAATTTCAATTGattctctgaaagggtcccaaaattagataa
aaatcaAGAATGGATTCCGTAAATGGGGCATAAATTCTCgtaatttttat
gtttcaaaattttgggtTATTGTTAGGAAAAAGTAGGGTTAAAAAGTCGT
TAAAACGTCAAAAAGGGACACAACTTTCGACCCTCAAAGGGTCGAATTTC
GAACTTTGGATCGTACATAACTACTTCTCAAGATGCATTTCGGTTTACCC
AGGATGCAAAATCGATTCCCATGAAGAGTTTGAGTGGCGATGGAATAATG
AATAACAATgaagaggaagaagtgaagaagaaagaagatttcgaagagaa
gaaaatgaatcacgaagaagaagagacaacaaagaCCGTCACTATTGAAA
TTGATGCAGGTGTGAACATTGATTCACAACCTTGCAAAGTTGTGTAGCTT
TTCTACCCCAAAtgttatctggtaccagatttGGAAATTCGGTACCACAC
GCTTTGCCCAAAGGTCGGACAAATTTAAAggaattggcccgctcctttag
agatTTAGGTTTGGCAGCCGCCAATGCGCcattggaatatcagataacct
cAAACGCCACTTGTAATCAACTTGTTGTTTTCAAAGTGGTGCATATATCT
TCACGAACCTAAGTATGAATTTATGTATAGCGCTTTTCCTGCACCGGGAA
CGATTAGTTTTTGATTTATCTGGATCCTTACTGATGGACTGAGGACGaca
gtaaatcagcactttttcCGCCGTTGAATTTTTGGGTCAAAACTGTCACT
CTGCCGTCctcaaaaatttagaaacataAAAACAGAAGGGTGTGAACGCG
TCAAGAAACTTATCCTCATTCAATCTTTGCTATTAACTTTATCTCAATCT
TCTGTCTATTGCTATACCACTTTCAACATtcatgaaaatcaagaaaattt
ggGAATTACATAGTTTGCTTTCAAAGATACTATCAAAGTTTTACCGCCAT
GattacttcaaaatattttacatttttccagACCCGttacttttgaagat
tttacgTTGCTTTTCTCTTCAACGTAACACATGTGCGATTATGGGAACGG
AACAGCCAAAAGGAGCAATCAGATCGGTACACGGCATCCGTGCCCTGAGC
ATGTTTTGGGTTATCATTGGGCACGTCTTCCTGTGGAGTCAAGGTGTTCC
TAATGGTAAGTAAATTTTACTACTATTTAAAATTGTTACTGTTTGAAACT
TATTTTTCCggaaaaattccatttatttaGATTGCACTCGAGAAAAGACT
ACCATATTTCGCTATTTCCTATATaaatcaaaatctcaaaatatactTAT
TGAATCCAAGCATAGCTAGCAAGGGAGCTGGTTAATAGTTTACTATGGAC
GTCTCTTTTCTGttaatacagtggagtcttcataactgtaacctctataa
ttcgaaatattcaaaactcgaacaaatttgtgtgacccgtgcgtgttcga
gttatggagactctattGTAGCATTTTCAAAACAGTACTTATCTTGtcgt
cttttttctttgtagACAACACATTGGTAGCAATGTCAAAGCTAGCAACA
GAATGGAGTTATCAAGTCATTAACAATTCGTTCGTTAGTGTAGACTCGTT
CTTCTTACTAAGGTACGTTATACACTTACCATATTTCCTCAAATAACCAC
CACGCCGGTCtttagattttgatattttaggtGCAGTATATATTAGTGGG
CCGCGCTCCCattaaaattcgaaaaatatggTTTCAGAGACCTTTAGTGA
CCCCAacaggcacacaacgttgttttaacgttcaaataacgttatttgaa
cgttatgaatgtcacatggacgttgctTTGACGTTGTGTACCGGCTGGGA
CGTTATACGTACGGAAATACTCTCTCCACGTGCTAAAGTTCAACAAACTT
TTATAAATAACGGTGGAAGCTGATTATTCGAGAATGGCTAAAGTACTGAG
GATTAGGAAGACTGTTTAACTCCTCAGTCAGGTTAACACATTTACCAAAT
TCTTTATAATACTTTTGCAGTACAGTTTTCCTTAGTCATCTGATTTGGTT
CCTCTGCCTTTGCATTAGTATCCGACCATCAACCtttgaaacacccctgt
cttacagccccggtggaacttttttccataatgggataaaaactcctatt
ggaatcccaatggggatagaaattatattgttccaaggttaaaaatacCC
AGTGAAGAtaggtttggagtgcaatttttaaacattgaatttcgaatgaa
gatgaaatcaaagtcaatttcccagtggggctgaaatttcagggtatttc
cTCACTGGGAACgaaatttttggtaaattttccagtggggctggagtCCC
AGCGggcctgtgacacaggggtgttttgaaacATGTCACTTATATATTTG
CTTCTTCCCTTTCAACAGTGGACTACTTGTTTCATATTTATCATGGAAGA
GAATGGATAAGACCAATGGTAAAATCAATCTACCAATGTTCTACATCCAC
CGTTTCTTAAGGTAAGAAGTTGTATTATCCTGAATGTACCTGGCTTTCAC
TTTCTATCAGGCCTGGCAGAAGCAGGGAGACTGGGGAGATTTCAACCTCC
CCACTTATGAGATttcttttctcaaattcctagcaaattttatctcattt
tgagccttcagtaGGGAAGCTTGACCgttgttccaccgggcctgCATATA
TGTCCTATTcggcttgaaaaggttcgtctacCCCCACTGTATGGATATTA
AATAGAACAGTGGCGACGTTGAGGCTTTAGCATGTGTAGATTTCCCGAAA
ACTTGAACAGTGTAATGACCACAGTCCTGTTGCGAAAGTGGTAAACCATT
GAATTATAAATGATTTATTACTTAATTGAGGTCACTAACGAGGGTCGCCG
ACGCACCAGACTTACCGGACGCAAAATGTCCGGTGTCGACAAATGAGATA
AACTTTTTACCACCGGAACGGCGTCCAATGCGCACCTATCACCTTGGACA
GAAATGTCCAGTGTCAAATATTTTCGTAATTGAACACTGGCTGGACAAAC
ACCAGACAGTTGTGTACTGGACAAAAACACTAAACAGTCTGCATCACCGG
CAGGGTCTTTTTCACTATGCTATTCCCGCCCTGTTACTTATATAACCATT
ATTTAGATTGACACCACTCTACATGTTTGTCATCTTACTTTGGAACAACA
TTTTCCCTTACACCATCTTTGGTCCTCTTGCACCACGATATCAAACGGAA
AACCATTTCAAAGCATGCAATAAGTACTGGTGGACCAACTTACTTTACAT
CAATAATTTCTGGCCGGAAAATTTC Coding sequence (CDS) from alignment at sc0000031_pilon:684780..691354+ >XLOC_045238 ID=XLOC_045238|Name=XLOC_045238|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2820bp|location=Sequence derived from alignment at sc0000031_pilon:684780..691354+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAACAAAAAGATACAAAATGAGGATGTTTGGAAAATTATTGACTATTAC
CACCATTCTGGCAATGATCAGAGTGTCCAATACTCAATTCCCTGATCTTG
GTGATCAGTTCCCAAAGCTTTCCATGGAATGCAATGTACAGCTGTATAAA
CATGGAAAACCGATCTTTGATCTAATGATGCGAACTTCAAATCAAACTGC
AGGAGGTGgtcaaaatataatgaaaacaTTGCTATTGACTCCACTCGGGA
AAAGTAACAAAAAGATACAAAATGAGGATGTTTGGAAAATTATTGACTAT
TACCACCATTCTGGCAATGATCAGAGTGTCCAATACTCAATTCCCTGATC
TTGGTGATCAGTTCCCAAAGCTTTCCATGGAATGCAATGTACAGCTGTAT
AAACATGGAAAACCGATCTTTGATCTAATGATGCGAACTTCAAATCAAAC
TGCAGGAGGTGgtcaaaatataatgaaaacaTTGCTATTGACTCCACTCG
GGAAAATGTTGGATTCATGGGGCAAGTTACCAGCACGTGTATTCAATCTT
CACACAAACTGGATGGGAGCATACGATGAGTGTAAAAGCATGCAGTTCAC
CAAATACTGCTCATCCAAcatgaaaatttataatatgTGTTGGATTCATG
GGGCAAGTTACCAGCACGTGTATTCAATCTTCACACAAACTGGATGGGAG
CATACGATGAGTGTAAAAGCATGCAGTTCACCAAATACTGCTCATCCAAc
atgaaaatttataatatgCTTGACGGTGTATATGGCAGTTGTGTCCCAAA
AGGTTGCAGTGACAATGACACACATGAAATACTCAATTTCATCTCCAAAA
AGTCTTGACGGTGTATATGGCAGTTGTGTCCCAAAAGGTTGCAGTGACAA
TGACACACATGAAATACTCAATTTCATCTCCAAAAAGTACTTGAACAACT
ATCTAACCTTCCCTgacagtggtaaaatttcgtggATTTTTGGCTCGCCA
ACTTATTGTGAAAAACCTGTCAGTTACAACAATGGCTTTTACGTGACTTT
ACTTGAACAACTATCTAACCTTCCCTgacagtggtaaaatttcgtggATT
TTTGGCTCGCCAACTTATTGTGAAAAACCTGTCAGTTACAACAATGGCTT
TTACGTGACTTTGGTGCTCAGTAGCATCATACTAGTATTGTGTCTTCTTG
GTTCATTTGTTGATGGCTTCGTGGAACCagttaagattttaaaaacacGC
CGTGAAGCAAATggaattgaaaacaaaggacTGGAAAACGATGATGAAAA
GGGTGCTCAGTAGCATCATACTAGTATTGTGTCTTCTTGGTTCATTTGTT
GATGGCTTCGTGGAACCagttaagattttaaaaacacGCCGTGAAGCAAA
TggaattgaaaacaaaggacTGGAAAACGATGATGAAAAGGATGCAAAAT
CGATTCCCATGAAGAGTTTGAGTGGCGATGGAATAATGAATAACAATgaa
gaggaagaagtgaagaagaaagaagatttcgaagagaagaaaatgaatca
cgaagaagaagagacaacaaagaCCGTCACTATTGAAATTGATGCAGGAT
GCAAAATCGATTCCCATGAAGAGTTTGAGTGGCGATGGAATAATGAATAA
CAATgaagaggaagaagtgaagaagaaagaagatttcgaagagaagaaaa
tgaatcacgaagaagaagagacaacaaagaCCGTCACTATTGAAATTGAT
GCAGACCCGttacttttgaagattttacgTTGCTTTTCTCTTCAACGTAA
CACATGTGCGATTATGGGAACGGAACAGCCAAAAGGAGCAATCAGATCGG
TACACGGCATCCGTGCCCTGAGCATGTTTTGGGTTATCATTGGGCACGTC
TTCCTGTGGAGTCAAGGTGTTCCTAATGACCCGttacttttgaagatttt
acgTTGCTTTTCTCTTCAACGTAACACATGTGCGATTATGGGAACGGAAC
AGCCAAAAGGAGCAATCAGATCGGTACACGGCATCCGTGCCCTGAGCATG
TTTTGGGTTATCATTGGGCACGTCTTCCTGTGGAGTCAAGGTGTTCCTAA
TGACAACACATTGGTAGCAATGTCAAAGCTAGCAACAGAATGGAGTTATC
AAGTCATTAACAATTCGTTCGTTAGTGTAGACTCGTTCTTCTTACTAAGA
CAACACATTGGTAGCAATGTCAAAGCTAGCAACAGAATGGAGTTATCAAG
TCATTAACAATTCGTTCGTTAGTGTAGACTCGTTCTTCTTACTAAGTGGA
CTACTTGTTTCATATTTATCATGGAAGAGAATGGATAAGACCAATGGTAA
AATCAATCTACCAATGTTCTACATCCACCGTTTCTTAAGTGGACTACTTG
TTTCATATTTATCATGGAAGAGAATGGATAAGACCAATGGTAAAATCAAT
CTACCAATGTTCTACATCCACCGTTTCTTAAGATTGACACCACTCTACAT
GTTTGTCATCTTACTTTGGAACAACATTTTCCCTTACACCATCTTTGGTC
CTCTTGCACCACGATATCAAACGGAAAACCATTTCAAAGCATGCAATAAG
TACTGGTGGACCAACTTACTTTACATCAATAATTTCTGGCCGGAAAATTT
CATTGACACCACTCTACATGTTTGTCATCTTACTTTGGAACAACATTTTC
CCTTACACCATCTTTGGTCCTCTTGCACCACGATATCAAACGGAAAACCA
TTTCAAAGCATGCAATAAGTACTGGTGGACCAACTTACTTTACATCAATA
ATTTCTGGCCGGAAAATTTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:684780..691354 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1243-1410:6408 |
| Aaloc | 1150-1239:5670 |
| Aaloc | 1054-1146:4768 |
| Aaloc | 880-1050:4234 |
| Aaloc | 721-876:3453 |
| Aaloc | 583-720:2965 |
| Aaloc | 472-579:2240 |
| Aaloc | 385-468:1756 |
| Aaloc | 256-384:1302 |
| Aaloc | 1-252:1 |
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