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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:558901..561226+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045234 ID=XLOC_045234|Name=XLOC_045234|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2326bp|location=Sequence derived from alignment at sc0000031_pilon:558901..561226+ (Clytia hemisphaerica_ch_hm2_pilon)
gtGCTTCTTTGCTCACTGATCCCTCTGGTGGCTTCCATCTCCTTCACACC
AGTACCTATCTACTATATCACTGAATCAGATATCACCTCCGAAGCCAAAC
AGCAGTATATCTTCAACTTAGCCTTATGCGGTGGGGAACAATTTGATCAT
TACCAAGCAAATGTTTTCGTCAATTTCCCAGACAAGAAATGGAATCCTGT
GATTAGTATGTTTAATAAGTTTATTTAGCCAAAATAGTGACCTAAAAATC
AGATAATCGCCTGTAATACATGTTAAACCAGAAAAAATCAAGACCCCCTC
AAGCGACTAGAATGTTGGATTCGAGATATAGTGAGTCTACTCGGAGTATT
AAAGAAATCGGCATAAAATTCTGGAAAATAATATCAATTCAATAcccttt
taagcctaaaaatattagAAGACGACAATTGTTCACTTTATCAAAAGAAt
attaccttattggtatatattttcgcgtgttacaaattttcgcgggtact
taatttcgcgagtattttggtcaattttcgcgaaatttaatactgtttaa
atttttcaaaattacaaaatcgcgaaattaaatacacgcgaaaaattttt
tcttagtattttgttagtatttttacatcaaaaacgttgtgtttcaagca
aaatcagtctttttcttgctttataccactttctgaaaatacctagttta
gtgaatcgcgaaatttaatacacgcgaaaattttccagaagtcggcaatc
gcgaaatttaatacacgcgaaacacgtttttttgaaaaaatttcgcgatt
cgcgaaaatttgtaacacgcgaaaatatataccaataaggtattctATAA
AGTTAATTTTCCCTTCTTACAGGTGACTATGTGTATGTACAAGTTGCTGA
CATTCACGGTCATATCATTGCTACAAATGAAGGACCTAAAGGATTTCAAA
TCCAATTCAAATTCCCCTATCACAAAGAATACTCCGACCTTCATTTGATC
GTTACTTCAGGAAATGCACCGGATTTAAAGTAAGCCTTTCattatacttt
aggcgtacaaactttcgcgaggtcgaaaattcgcaaaatttacgacattt
actttcgcgagcataaacttgaATTCAATAAAGCTTTTAAGgcataaaaa
tgaaacaattactaattttgattttgatttggaagcctttatagattttc
aactttttagagaatttttcgcgagcataaactttggCGAATCAccttgt
taagaattttcaaatgcaTTTTCTTTCGCGAATAAGGCCGAAATTCAACT
AAAGTATGTCAAATTGGAGGAAAATTGGAGGAAAAGCTTTACCGTTTCTG
AAACCTTTTCCGTGTCGATATCCTTCAAGCTAAATAAAATCTAACATTTC
GATTCTAGGTATACAATCACAGTCACGTTCACCGATTCACCAAGTGATCG
ACCATCACGTCTCAGTAGTCCACCCAATGTTCAAAAACGTTTTATGAGAT
CTGAAGAAGAGATCCTAGCATGGAAGAAAATACAAGAAGCTAAAGGTAAA
TTTAGAACTCAGATCATGTTTATCCTGTATTTAACAAGGCTCTAGTTAAA
ATACAAACAGTGAAGAAAGGGGAGGGGAGGGAGTTGGGAGAAGAAGTAAA
TTTAAGGAACTAAGACTGCTGAGAATCTAAATATCATTTGAAAGAAGGAA
CTTTTCATAGCTTAAACACTTGTTAATTACAGGTGCAGAGACAACACAAG
ATATGGTTAccattttcaaaactactgcaGGCGAAGTCGTTCAAACAGCT
GATGTTGTAGGCTTTGAATTGGGTTATTGCTTCAACACGGCTAAGGTAAG
TCTAAAGGACgaataaacaaataaattttataacttaGTGCATGTTATAA
GATCATAACCTaaaaaaaaGTATAGAAAAAGATTTATGAAAAAGACATAT
GTATCGAGAAGTGCTCAATGTCGTAAGAGAAGGACACCTACAAATTGTAA
TtaaaatgtttacatttctacGTTAACAGTTCCCTGGAGACGTAGTCATC
TCAGTATTGGGAACAGATGAATTTTCAGGATTCGCAACTTATGCATGTAC
ACACGAAACAAATTGTACGTCAACCGAAAAAGCACCATACTACGATACCA
GTGGAGCAGTTGTCAATTTCGTTACCGTGCACTTGAAAGACCCTTCTCAA
GATGGCGCCATCCAAGTTCTTATAAGAGGTGATGGACGAGTTGATAAGGA
GAATCATTTCACATTGAGTGCTTCGAAATTCACAAAAAGAGACAAGTGCA
TCTCTAAACAGGGTTTTGTTGTTTAA Coding sequence (CDS) from alignment at sc0000031_pilon:558901..561226+ >XLOC_045234 ID=XLOC_045234|Name=XLOC_045234|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1818bp|location=Sequence derived from alignment at sc0000031_pilon:558901..561226+ (Clytia hemisphaerica_ch_hm2_pilon)
gtGCTTCTTTGCTCACTGATCCCTCTGGTGGCTTCCATCTCCTTCACACC
AGTACCTATCTACTATATCACTGAATCAGATATCACCTCCGAAGCCAAAC
AGCAGTATATCTTCAACTTAGCCTTATGCGGTGGGGAACAATTTGATCAT
TACCAAGCAAATGTTTTCGTCAATTTCCCAGACAAGAAATGGAATCCTGT
GATTAgtGCTTCTTTGCTCACTGATCCCTCTGGTGGCTTCCATCTCCTTC
ACACCAGTACCTATCTACTATATCACTGAATCAGATATCACCTCCGAAGC
CAAACAGCAGTATATCTTCAACTTAGCCTTATGCGGTGGGGAACAATTTG
ATCATTACCAAGCAAATGTTTTCGTCAATTTCCCAGACAAGAAATGGAAT
CCTGTGATTAGTGACTATGTGTATGTACAAGTTGCTGACATTCACGGTCA
TATCATTGCTACAAATGAAGGACCTAAAGGATTTCAAATCCAATTCAAAT
TCCCCTATCACAAAGAATACTCCGACCTTCATTTGATCGTTACTTCAGGA
AATGCACCGGATTTAAAGTGACTATGTGTATGTACAAGTTGCTGACATTC
ACGGTCATATCATTGCTACAAATGAAGGACCTAAAGGATTTCAAATCCAA
TTCAAATTCCCCTATCACAAAGAATACTCCGACCTTCATTTGATCGTTAC
TTCAGGAAATGCACCGGATTTAAAGTATACAATCACAGTCACGTTCACCG
ATTCACCAAGTGATCGACCATCACGTCTCAGTAGTCCACCCAATGTTCAA
AAACGTTTTATGAGATCTGAAGAAGAGATCCTAGCATGGAAGAAAATACA
AGAAGCTAAAGGTATACAATCACAGTCACGTTCACCGATTCACCAAGTGA
TCGACCATCACGTCTCAGTAGTCCACCCAATGTTCAAAAACGTTTTATGA
GATCTGAAGAAGAGATCCTAGCATGGAAGAAAATACAAGAAGCTAAAGGT
GCAGAGACAACACAAGATATGGTTAccattttcaaaactactgcaGGCGA
AGTCGTTCAAACAGCTGATGTTGTAGGCTTTGAATTGGGTTATTGCTTCA
ACACGGCTAAGGTGCAGAGACAACACAAGATATGGTTAccattttcaaaa
ctactgcaGGCGAAGTCGTTCAAACAGCTGATGTTGTAGGCTTTGAATTG
GGTTATTGCTTCAACACGGCTAAGTTCCCTGGAGACGTAGTCATCTCAGT
ATTGGGAACAGATGAATTTTCAGGATTCGCAACTTATGCATGTACACACG
AAACAAATTGTACGTCAACCGAAAAAGCACCATACTACGATACCAGTGGA
GCAGTTGTCAATTTCGTTACCGTGCACTTGAAAGACCCTTCTCAAGATGG
CGCCATCCAAGTTCTTATAAGAGGTGATGGACGAGTTGATAAGGAGAATC
ATTTCACATTGAGTGCTTCGAAATTCACAAAAAGAGACAAGTGCATCTCT
AAACAGGGTTTTGTTGTTTAATTCCCTGGAGACGTAGTCATCTCAGTATT
GGGAACAGATGAATTTTCAGGATTCGCAACTTATGCATGTACACACGAAA
CAAATTGTACGTCAACCGAAAAAGCACCATACTACGATACCAGTGGAGCA
GTTGTCAATTTCGTTACCGTGCACTTGAAAGACCCTTCTCAAGATGGCGC
CATCCAAGTTCTTATAAGAGGTGATGGACGAGTTGATAAGGAGAATCATT
TCACATTGAGTGCTTCGAAATTCACAAAAAGAGACAAGTGCATCTCTAAA
CAGGGTTTTGTTGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:558901..561226 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 625-921:2030 |
| Aaloc | 514-624:1735 |
| Aaloc | 376-510:1410 |
| Aaloc | 220-372:875 |
| Aaloc | 13-216:1 |
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