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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:526346..531970+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045233 ID=XLOC_045233|Name=XLOC_045233|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5625bp|location=Sequence derived from alignment at sc0000031_pilon:526346..531970+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatcaaatgGAATGCCCAATTTGTGGATTGAGTTTTTCAAAAGACAA
AATTGAAAAGCATGCTGATACATGCCTcagatttccaaaagaaaaagctA
CAACTCGTAGAAGATCAAGTGGTCAGACTCCTGCATCTTCAGTATCAAAA
AGCTTAGGAGATTTcttcacaaaacaaaacaagagaaaaagaccaatatc
cccagaagctaaactaaaaaagaaatgtGATGAAAATTCGACGGATTCGA
TAATCATCTCTGAAAGTCCCCCTTTACCGTCTATTGATATCAAGACAGAT
GGCGATAAAAACCAAGTTGATAATAAACCGATCAATGGCTTTCAAGAAAC
TTTATTGAAATGGtcaaaagaaaacaatcaaGTCAAAGTTGAGAATACTC
TTAGTGGTTCTGATAAAACAACAAATGAAGAAATAAAGCCAATCGAAAGT
AATGACAAAGATGATATTATTGTTGAGAGAAAGCTCAATGAAACTATTGC
AGCATCATCCAcaaagatagaaacaaatcaaaagcaacgaaaaactaaaa
aagcacaaatcgcacttgggaaaaTTCCATTGGCTGATCAAATGAGACCA
ACTAACTTTGATACCTATTTTGGTCAAGAAGCTGTCAACTCTAATAAAGT
GTTAAAAGAGTTGTTCTATAACAAAAGGATTCCTTCATTACTTCTCTGGG
GACCCCCTGGTTGTGGAAAGGTttgtatttagattttttttacatctttt
tcatttgatttcacTTGTCATTGATTCAAACATTAGTTTTATTATCACTT
TCTCCAAATTCACTTTAAATGGAAAAATAAGATAAATGAAAGTTCACACT
TAGTCAGTCCCCTTTTCTTGCAAAAGGCAATGTCGGTATAATTTCGTTTA
CATTAGGTCTGGCATACTGTTTTTTAAATGTACTAATCTGTCAGATCAGa
tatttcattttatctttGGTCTTCAAGGTCACATGTTCGTGTTCTATCTT
AGACAAGTTTGGCGAACATCATTGCTCAGAAATGTAAAGAAGAAGCACAG
TATCGCTTCGTGACATTGTCAGCAACAATGGCTGGTGTGAATGATGTCAA
GGAAGCTGTCAAGATTGCCAAAAATGAAAGGAAATTAACAAGGAGACAAA
CTGTATTATTTATTGATGAAGTACATCGTTTTAATAAGTTACAGCAGGTA
AACTCTTTGCAAATTTACATCGTTCGaactaaaattttctttgttattcT
TTCAATTGGCTTGTTGATCAGTATTATTTAGTTTTAAGttattttcctta
gaaaaaacAGAGGATAAATCAGCTTTGAATAGCCAAATATAACCAtttaa
ttttaatgattttcctttaaaaatacaagaaaatatttaatggAGAGCCA
GGAATATATTATAATCAAATCTTAAGTGATTTTACATCGCTCCAAAAGGT
TTGAGTATGGGATTCAACTATATGCAACTTTCCTTTTAAGAGCTTTAGCT
TTGGATGGGACTATATCAAAATTTAAAGCTtccttcaaaaatcaaaaacc
ttttttgaaatgacaagaatataacaatagcaTTCAGtgtgaggtcgttg
ttgttattttctgcccgcgtagTTTGATGATTCGCCCGATAGTGTCATTT
GGGTCCGATGCGAAgaaagggcagaattaatgacaacagcgaacgaaaac
ttaacgctattactattattatccatatcggacattcaaacaacgttttt
ttctagcgtcaaccaagtcttttcgcttcaatgcaatgtcttcaacaaat
ttttagcaccttgcgagcgggccgcaaatgaccaaaaagtgacgttagtt
tagtctcttcgcttcaatgcaacgacttcaatccatttacgagcgggccg
caaatgacgttattgcccTATACCCGGGCGGTTAAtaatatttcagccct
ctgatgcctggcgctttagtttcctcagcgcgggtatgacaatttgagtc
acaaaacctttcaataccgcccgccgattgaacctttaatggcttactta
atgaccactatatggataataatataTAATTCAACAGGAAAAATATAATT
GAATAATTTTCCTTTAAGATTACACTGCCAATTCGTTAATTCTGCTTTGT
GAGCATGCGCTTGCTTTCATTATTattgaatataatttttataaactGAC
AAGTAACGTTTTTCTTGTTATTTTGTAGGATTCATTTCTCCCCCATCTCG
AAGATGGAACAATCGTTTTAATAGGTGCAACAACAGAAAACCCTTCATTT
CATTTGAATAATGCACTGTTGAGTCGATGTAAACTTATTGTTTTGACTAA
GCTGAGTGTTACCAATATTAAAAACATTCTACAGAATGCTGTTGAGCGTC
TAGATGGTCATGAAAAGACAGATAGCAGCTCTAAAGAAAATGGAGATCTT
GGTTTCAGGTAAATTTCTTTTTACCTTCGaataaagattatttttttcct
tttttggccttttcataaaaatctatCAGTATTCGTGAAAGCAAATCACC
TAATGATTTGTTAATTTACATATCACAAATTCTTGTAttttaaaactctt
tttttagGGCTCTTGGCTCTCTTTATTTTGAACTCCCAGGGGAATGAACT
AACCATTTGTTTGAGGTAAAAAAGAAGTTGAATTTCAGGACTTGATACCC
TTTTGAATTTCATTGTATTCAAGTTTAGGCAGTCAAAGAGTCTGCTGTac
tgatcaaaatattttaacacgCTTTAAAGTTATTCTTGTTatagatgttt
tgaaaaaagtttttctatgtattttcaaaggaaaatctaataatactgaa
aaatatttttcttctttcgatAAACAATTACCTTTTTgcacattgggctc
ttccagaaaatgtccgtacataggggggggtggaggatatagtgtctggg
gttagtgaaaaaatctacaaaatctacCCTGTTTTGGGTGAATTTGGCCC
TGCTtgaaggtaattttgaatgtccagggggtcaactgatttttgtccga
gggattagacctgctgtccggggcgTCAAAAGTCACTATGACTGGGGCTa
attttccaagaaatattATATCTTCCATCTTCTATATTCAAAATCTTTAC
TTGTAAACTTCATTTCCACCAGTCAACCATGTTCTTTTAAATTCAGATTC
ACACTTGAGGAAGGTGTGTTGAAAACCATTGCTGAGTATGCTGGTGGTGA
CGCAAGAGTAGCATTGAACACTTTAGACATGCTCTTACAATCAAAACTCA
ATCCAGCCAATATCGACCAGACTTTTTATATTACTGTTCAAGAGGTCAAA
GAAGGTATGAATTGTTTCTGGaacaattttgttattttcttcgCTCAAAT
TTGTTAACGATGGTCAccttttgggaaaattttgtgatttattATAAATA
CAATCTGAGTCAGAGTAATTTGAAAGCAGACCGCAGAAtcttttttggcc
aaattttcaaTTGTAAATCATGAAGCGGGATCCGTCGCAGCCAACTTCAA
AAGAAAGACAATTATCAAAAGGGGAATAGTTCTCATTAGTTCTTGACTAA
TCTtgacttttattttctttgattttgtaaCACATAAAAattacaggcat
tattatattacaattacatttttatgtgtattattatatCATGACCTGGG
CCTAACTAACTGTATTTTATATCTTTCAGATTTGTCAATTCATTATGAAT
CTCATGAAAAATCCTTGCCAGATCAACAAATATAAATTACAGACTAAAAT
TCTAACCAAATTCAATTATTTAACTGCAATTTCTTCAATTCTCACCAGAC
ATGAAAAGAGGTTACGTCAATTACGACCGGAATGGAGATGAACATTATGA
CATCATATCTGCTCTCCATAAAAGCATCCGTGGAGGAGACCAAGACGCAG
CAATGTATTGGTTGGCTCGCATGTTGGAAGGGGGAGAGTCTCCATTGTAC
ATTGCACGAAGATTGGTACGCATCGCAAGCGAAGATATAGGTATTCTTTA
TCAAGGTCTATTAGGACTATTATATTGATCAAGCCGTCGATGATACTTTT
ATATCTCTCCAAGAAGTCTCTAAAAAGGTTATGTTCGAAGTTTACTGGCC
TgtattgttttattatataattttattttttacattatCTCACTCAAATA
TTGCGACATTTCCTTCTATCGACGGATTTCcgtaatttctttaatttcta
aCAAGGATGATTTAGAGACTTTCGTCAATAAAGCTTGTTTTAAAACTGCT
CACACATCTTGATAGCGTATTTTTAAGATGAATATTTTAACGTGATACTT
TTTCTAAGGATTAGGAGATCCACTTGCATTGAATCAAGCTGTATCGGCAT
ATCAAGCATGTCATTTTATTGGAATGCCCGAGTGTGATGTAAGTATGAGT
TTTTATGTGCTTAGAAACTAGGATGAAATTGGTCTTATTGTTCAATTTAC
AGtcatctctctctaattcgaatctccattattcgaatctttctaattGG
AACTATAAATtttgtcccctcagctggaaagtggtttaaattactctgtt
attcgaatctttctctgatTCGAATAAAACTTTAGGTCCCTGAAAggttg
aattagagagcgtcaactgtttGTATATTTTGGGAGGGTTTCAAATAGAT
GTTATGCTGTGGATCTGACTGATCTTCCTTGTGTGCGAAGATTGGATAGT
TCAAGGTATATCAACTTGGATATACCTGTTTTATGGATCCGATTTCATTT
AAAGGTGATACTTGCTCAAGTTACAACTTACTTAGCACGTGCAGCCAAAA
GTATCGAAGTTTACGAAGCATACACCAAAGCCAAACAGTTGGTGAAAGCA
TGCAATGGACCCCAGCCTGAAGTACCGATCCATTTAAGAAATGCTCCAAC
CAAAATGATGAAGAATTTAGGTTATGGCAAAGGGTATAAGTAAGTCCAAT
CGCGAAAGAGAACTGTAAACTACTCGCTGTTAATTTAAGTTTTTCGTCGA
TAACCAGACATTTTTTACTGCTGAAGTGGCTTCGAAAGTATAAAGTAACG
TCAAAAGATCGACTGTATTTACACCTAGAACCAACTAGAACCTCGGCTCT
GAACATTCATAAAAGTCGCACAATGTTCTAAAATCCAAGACGTCTAAAAT
GGGCTATTTATAAAGTATAAACAATATAAACCAGAGAAACCAGACAAATA
TCGAATACAAGGACGTacaaatcattttaattttgtGATGGAGGATAGAC
GTGACCTTCTTTACGCTTTGTTATTCTAacgcaacctcgttccctgcgta
ttatcagcttttttatgcttactgatagcgctagataataccctggcatt
gtctgTTTTTCGAACGCGTAAGTTTACGTacgggtattctctggcgtcaa
tcagtaacgttaATAAAGCCGGGATACACGGGTACGAGGTTGACTCTAAT
GCACGGTTTTCTTCTCTATTTTGCACAGGTACACACCAAAATGTCTTGAT
GATCCTGAGCAAGAATATCTTCCACTCAGTCTCAAAGATACCAAATTTTT
CGCAGAAGAAAATGGGAACTCCTAG Coding sequence (CDS) from alignment at sc0000031_pilon:526346..531970+ >XLOC_045233 ID=XLOC_045233|Name=XLOC_045233|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3714bp|location=Sequence derived from alignment at sc0000031_pilon:526346..531970+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatcaaatgGAATGCCCAATTTGTGGATTGAGTTTTTCAAAAGACAA
AATTGAAAAGCATGCTGATACATGCCTcagatttccaaaagaaaaagctA
CAACTCGTAGAAGATCAAGTGGTCAGACTCCTGCATCTTCAGTATCAAAA
AGCTTAGGAGATTTcttcacaaaacaaaacaagagaaaaagaccaatatc
cccagaagctaaactaaaaaagaaatgtGATGAAAATTCGACGGATTCGA
TAATCATCTCTGAAAGTCCCCCTTTACCGTCTATTGATATCAAGACAGAT
GGCGATAAAAACCAAGTTGATAATAAACCGATCAATGGCTTTCAAGAAAC
TTTATTGAAATGGtcaaaagaaaacaatcaaGTCAAAGTTGAGAATACTC
TTAGTGGTTCTGATAAAACAACAAATGAAGAAATAAAGCCAATCGAAAGT
AATGACAAAGATGATATTATTGTTGAGAGAAAGCTCAATGAAACTATTGC
AGCATCATCCAcaaagatagaaacaaatcaaaagcaacgaaaaactaaaa
aagcacaaatcgcacttgggaaaaTTCCATTGGCTGATCAAATGAGACCA
ACTAACTTTGATACCTATTTTGGTCAAGAAGCTGTCAACTCTAATAAAGT
GTTAAAAGAGTTGTTCTATAACAAAAGGATTCCTTCATTACTTCTCTGGG
GACCCCCTGGTTGTGGAAAGatgaatcaaatgGAATGCCCAATTTGTGGA
TTGAGTTTTTCAAAAGACAAAATTGAAAAGCATGCTGATACATGCCTcag
atttccaaaagaaaaagctACAACTCGTAGAAGATCAAGTGGTCAGACTC
CTGCATCTTCAGTATCAAAAAGCTTAGGAGATTTcttcacaaaacaaaac
aagagaaaaagaccaatatccccagaagctaaactaaaaaagaaatgtGA
TGAAAATTCGACGGATTCGATAATCATCTCTGAAAGTCCCCCTTTACCGT
CTATTGATATCAAGACAGATGGCGATAAAAACCAAGTTGATAATAAACCG
ATCAATGGCTTTCAAGAAACTTTATTGAAATGGtcaaaagaaaacaatca
aGTCAAAGTTGAGAATACTCTTAGTGGTTCTGATAAAACAACAAATGAAG
AAATAAAGCCAATCGAAAGTAATGACAAAGATGATATTATTGTTGAGAGA
AAGCTCAATGAAACTATTGCAGCATCATCCAcaaagatagaaacaaatca
aaagcaacgaaaaactaaaaaagcacaaatcgcacttgggaaaaTTCCAT
TGGCTGATCAAATGAGACCAACTAACTTTGATACCTATTTTGGTCAAGAA
GCTGTCAACTCTAATAAAGTGTTAAAAGAGTTGTTCTATAACAAAAGGAT
TCCTTCATTACTTCTCTGGGGACCCCCTGGTTGTGGAAAGACAAGTTTGG
CGAACATCATTGCTCAGAAATGTAAAGAAGAAGCACAGTATCGCTTCGTG
ACATTGTCAGCAACAATGGCTGGTGTGAATGATGTCAAGGAAGCTGTCAA
GATTGCCAAAAATGAAAGGAAATTAACAAGGAGACAAACTGTATTATTTA
TTGATGAAGTACATCGTTTTAATAAGTTACAGCAGACAAGTTTGGCGAAC
ATCATTGCTCAGAAATGTAAAGAAGAAGCACAGTATCGCTTCGTGACATT
GTCAGCAACAATGGCTGGTGTGAATGATGTCAAGGAAGCTGTCAAGATTG
CCAAAAATGAAAGGAAATTAACAAGGAGACAAACTGTATTATTTATTGAT
GAAGTACATCGTTTTAATAAGTTACAGCAGGATTCATTTCTCCCCCATCT
CGAAGATGGAACAATCGTTTTAATAGGTGCAACAACAGAAAACCCTTCAT
TTCATTTGAATAATGCACTGTTGAGTCGATGTAAACTTATTGTTTTGACT
AAGCTGAGTGTTACCAATATTAAAAACATTCTACAGAATGCTGTTGAGCG
TCTAGATGGTCATGAAAAGACAGATAGCAGCTCTAAAGAAAATGGAGATC
TTGGTTTCAGGATTCATTTCTCCCCCATCTCGAAGATGGAACAATCGTTT
TAATAGGTGCAACAACAGAAAACCCTTCATTTCATTTGAATAATGCACTG
TTGAGTCGATGTAAACTTATTGTTTTGACTAAGCTGAGTGTTACCAATAT
TAAAAACATTCTACAGAATGCTGTTGAGCGTCTAGATGGTCATGAAAAGA
CAGATAGCAGCTCTAAAGAAAATGGAGATCTTGGTTTCAGATTCACACTT
GAGGAAGGTGTGTTGAAAACCATTGCTGAGTATGCTGGTGGTGACGCAAG
AGTAGCATTGAACACTTTAGACATGCTCTTACAATCAAAACTCAATCCAG
CCAATATCGACCAGACTTTTTATATTACTGTTCAAGAGGTCAAAGAAGAT
TCACACTTGAGGAAGGTGTGTTGAAAACCATTGCTGAGTATGCTGGTGGT
GACGCAAGAGTAGCATTGAACACTTTAGACATGCTCTTACAATCAAAACT
CAATCCAGCCAATATCGACCAGACTTTTTATATTACTGTTCAAGAGGTCA
AAGAAGACATGAAAAGAGGTTACGTCAATTACGACCGGAATGGAGATGAA
CATTATGACATCATATCTGCTCTCCATAAAAGCATCCGTGGAGGAGACCA
AGACGCAGCAATGTATTGGTTGGCTCGCATGTTGGAAGGGGGAGAGTCTC
CATTGTACATTGCACGAAGATTGGTACGCATCGCAAGCGAAGATATAGAC
ATGAAAAGAGGTTACGTCAATTACGACCGGAATGGAGATGAACATTATGA
CATCATATCTGCTCTCCATAAAAGCATCCGTGGAGGAGACCAAGACGCAG
CAATGTATTGGTTGGCTCGCATGTTGGAAGGGGGAGAGTCTCCATTGTAC
ATTGCACGAAGATTGGTACGCATCGCAAGCGAAGATATAGGATTAGGAGA
TCCACTTGCATTGAATCAAGCTGTATCGGCATATCAAGCATGTCATTTTA
TTGGAATGCCCGAGTGTGATGATTAGGAGATCCACTTGCATTGAATCAAG
CTGTATCGGCATATCAAGCATGTCATTTTATTGGAATGCCCGAGTGTGAT
GTGATACTTGCTCAAGTTACAACTTACTTAGCACGTGCAGCCAAAAGTAT
CGAAGTTTACGAAGCATACACCAAAGCCAAACAGTTGGTGAAAGCATGCA
ATGGACCCCAGCCTGAAGTACCGATCCATTTAAGAAATGCTCCAACCAAA
ATGATGAAGAATTTAGGTTATGGCAAAGGGTATAAGTGATACTTGCTCAA
GTTACAACTTACTTAGCACGTGCAGCCAAAAGTATCGAAGTTTACGAAGC
ATACACCAAAGCCAAACAGTTGGTGAAAGCATGCAATGGACCCCAGCCTG
AAGTACCGATCCATTTAAGAAATGCTCCAACCAAAATGATGAAGAATTTA
GGTTATGGCAAAGGGTATAAGTACACACCAAAATGTCTTGATGATCCTGA
GCAAGAATATCTTCCACTCAGTCTCAAAGATACCAAATTTTTCGCAGAAG
AAAATGGGAACTCCTAGGTACACACCAAAATGTCTTGATGATCCTGAGCA
AGAATATCTTCCACTCAGTCTCAAAGATACCAAATTTTTCGCAGAAGAAA
ATGGGAACTCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:526346..531970 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1762-1857:5530 |
| Aaloc | 1576-1758:4805 |
| Aaloc | 1498-1575:4361 |
| Aaloc | 1306-1494:3851 |
| Aaloc | 1147-1302:3198 |
| Aaloc | 916-1143:2229 |
| Aaloc | 721-915:1003 |
| Aaloc | 1-720:1 |
|
