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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:451721..455437+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045230 ID=XLOC_045230|Name=XLOC_045230|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3717bp|location=Sequence derived from alignment at sc0000031_pilon:451721..455437+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACCATATGCTAAGCTACTCACAAGGTATACAATTTTTGTTTACAC
CAAATTTCTcggaatttttttgcaaaatgaagtcattgcaaagcaattta
aaaaaataaattttactcGACTGTTCGATTCGATGAATTTGAGGCTTTTG
TAGTTTTTATTCCTTGACTCTCATGGACATAGATCAGCATGATTTGTTTA
TAGAACAAGGTATAttgttttgtttgcagtatagttgttaaaaaagtttt
gtttgttttggcttatgacattgtttttATTACAAACTTTCGaccttttg
ttcttatttattttgTGTTGATGGGACTTTTTATAGCAgtatttgactga
aatttgaaaCCTTTTATAAAGCACTCAATGCCTTTTTACTTCCGCGTCTA
TAACAAGTTTTTAGATAGATTTATCTATTTTTGTGAGTTTTGGACGCATT
CAACCGAAAATATAgaaacatttttagatttcttaCTCCTAAACTAAATT
ATTCATGATCAATACAAGAGTTTCCAATCCCTATACAAATGACCTCTTTT
CAATCTCTAAGCTATGATTCCTATAATATTTCTTGACTTCATTCATCCCG
TTTAAGGATTTGAATATGTCttttaaatacaaaatttagaaatgtaAAAA
TGGCTTTACAATTAATGATAGGAACTTATCAGTTAGATTTAAATAGTTTT
TAAAGATTAATGTCTTgcattaagaagattaaaagaCATTTAAGAGTTTC
TATTGCTCAAAACAGTTAGACTCACACCTTAATTTAAACCCTATTGTCAA
gacacaaaaattgaaatgcTAGAATTCTAAGTACCTTATAACCAACCTAT
atgtaaaatagaaaatgaaccACTGAACTGACTTggatattttttaattc
aagggTTTATTTTATAGATAAACTTGGCACTACATTAGACATTCCCATAC
TTTCCCATTAATTCAAAAGACTCCTCAAAATCAAAAGCgtgaaaatgtta
tatttttgtttcaggtTCAGCCTTCACTCAACCCACTTATTTCGAGCTCT
GCAATTACGACAAATGGCATccttatcaaaaaatatttctgtcaCACATG
GCAATTTTGAAACACTCCCAAATAAAGTAAAGGATTTTGTCgtacaaaaa
agtgaattatgtCAGCCAGATTTTCTCCACATTTGTGATGGCTCAGAAGA
TGAGGCACAAAGCTTAGCTGATCTTCTTGTAAAAAATGGAACTgcaagaa
aattggaaaaaatggataATTGGTAAGAATGCACTTATGATTACTATTAA
CAAAGAATACCTCCACTCACTTTTAACTaaaaaccattttgattttttta
atcaaaattgtcatGATAAAGATTgaatattctttatttttagctATGCT
GTCCGTACTAATCCAGCTGATGTTGCACGTGTTGAATCAAAAACGTTGAT
CTGTACTGAAAATAAACATGATACTGTCCCCCACACCAGAGATGGAGTTA
GATGTTCAGTTGGACAATGGACTGAGCCTAAAGAAATGAAGGAAAAGCTC
CAAGGATTATTCCAAGGATGCATGAAGGGTAAAGATTTGAGATTTGAAAT
TATACTTAATACATTGCTCTGAtttgtgagtgttttttacatggttttca
catggttatgtttcatctgattttttgtttttattcatgATCTCTTTTGT
ATCTTATAGGAAGAACCATGTatgttattccattttcaatgGGACCTGTT
GGCTCTCCTTTGTCCAAAATTGGTATTGAACTTACTGATTCTCCATATGT
CTCAATGTCTATGGGTGTTATGACTAGAATGGGATCAAAAGTATTGAATT
CTCTGGGTGATGGTGATTTTGTCAAATGTTCTCACTCTGTTGGACAACCT
TTACCTCTTGAAAAACCAGACCCATATAACTGGCCATGTAATCCAGAAAA
GACTGTTATCACACATTTCCCAGCTGACAGAGAAATCATCTCCTTTGGAT
CTGGTTATGGTGGAAACTCACTTcttggaaagaaatgttttgcTTTGAGA
ATCGCATCTGCTGTTGCTAGAGATGAAGGATGGTTAGCTGAACACATGCT
GGTATGTTCTCATTCCCCTTGAATTCGCAAAGTTAATTTATTCATGCTAT
CAAGTGCTATCTATGAAATCTGAAAAGTAACTAATTGGTTTTCATTGTCA
CCTCTTTTAGATCCTTGGATTGACTAACCCACAAGGTGAAAAGAAATATG
TTGCTGCTGCATTTCCAAGTGCTTGTGGAAAGACAAACTTAGCTATGTTA
ACCCCAACTTTACCAGGATGGAAAGCAGAATGTGTCGGTGATGATATTGC
ATGGATGAAATTTGACGAGGAAGGTGTCTTGAGAGCTATTAATCCAGAAT
ATGGATTCTTTGGTGTTGCCCCCGGAACCTCAATGGAAACCAACCCACAA
GCATTAATTGCTTGTCAGAAGAACACTGTCTTTACTAACTGCGCTACTAC
TGATGATGGTGAAATCTACTGGGAAGGTACGACAAGATCAAATTTAATTT
CTCAGACTTCTTCTTGCCCTTTTTTAATTGCTGGAAATGatcatcaattt
ttAaaaatgactGAAGTTCTTAAGCTACTCTATTCATTTCGCTATCAATG
CGCTAATCTGTATTCATGATTCATGAATATTAATTCGattaatttgatga
attttttctcCAGGTCTTGAAAAGGAAGTCAACCTTGAAGGTCGTTCAGT
CACTGACTGGTTGGGTAAACCATGGACTAAAGAATCTGGAACAAAAGCTG
CTCATCCAAACTCTCGATTCTGTACGCCAGCTGGAAATTGCAAAGTTATC
GATCCACTTTGGGAAGATCCTAAAGGTGTCCCAATCTCTGCTATCTTGTT
TGGTGGACGCCGACCAGAAGGTGTGCCATTGATCTACGAAGCATTTAATT
GGCAACATGGTGTGTTTGTTGCAAGTGCTCTTTGCTCTGAAACGACGGCT
GCTGCAGAACACAAAGGCAAAGCTATAATGAGAGATCCCTTCGCCATGAG
ACCATTCTTTGGATATAACGCTGGACATTACTTTAAACACTGGTTGAGTC
TTGAAGATGATAAGAAACATCAATTACCTAAAATTTTCCATGTCAACTGG
TTCAGAAAAGGAGAAGACGGCAAATTCCTATGGCCTGGTAAGTCCTTGTT
TACATTCTCATGGCTCTCTTTCATTTCATATAGACTTTACAAATTAATTG
TGAACCTTTCCTCTTCATTTTATAAAATTTCCTTGAATACCAGTTTGAAA
GACTAAAATCTCTCATATTAAAAATGGCATGCAATCTCAAAGGAGGGATT
ATAATAGTTTTCTTAGCTGTAGTTTCCAAACAACCTATAACAATTACAAT
AATTTTCATATTTCAGGATTCGGTGAAAACTGTCGTGTCTTGAAATGGGT
TTTCGATCGCGTCGACGGCAAACACGGAGTCCACAAAAATCCACCGTCGG
ATATTTACCTGAAAATGACGCATTAGACTTAAATGGACTAGATGAAGATT
TAAATATGAAAGAACTAATGTCTGTTCCCACTGACTATTGGATGGAACAA
CTAGATGATATtgagaaatattataatcaacAATTTGGTGAAGATATTCC
ACAACAATTATGGGATGAAGTACATTCTTTCAGGGAACGATTGACAAAAT
CTCCTACCGCCGCTTAA Coding sequence (CDS) from alignment at sc0000031_pilon:451721..455437+ >XLOC_045230 ID=XLOC_045230|Name=XLOC_045230|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3910bp|location=Sequence derived from alignment at sc0000031_pilon:451721..455437+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACCATATGCTAAGCTACTCACAAGATGGCACCATATGCTAAGCTA
CTCACAAGgtTCAGCCTTCACTCAACCCACTTATTTCGAGCTCTGCAATT
ACGACAAATGGCATccttatcaaaaaatatttctgtcaCACATGGCAATT
TTGAAACACTCCCAAATAAAGTAAAGGATTTTGTCgtacaaaaaagtgaa
ttatgtCAGCCAGATTTTCTCCACATTTGTGATGGCTCAGAAGATGAGGC
ACAAAGCTTAGCTGATCTTCTTGTAAAAAATGGAACTgcaagaaaattgg
aaaaaatggataATTGgtTCAGCCTTCACTCAACCCACTTATTTCGAGCT
CTGCAATTACGACAAATGGCATccttatcaaaaaatatttctgtcaCACA
TGGCAATTTTGAAACACTCCCAAATAAAGTAAAGGATTTTGTCgtacaaa
aaagtgaattatgtCAGCCAGATTTTCTCCACATTTGTGATGGCTCAGAA
GATGAGGCACAAAGCTTAGCTGATCTTCTTGTAAAAAATGGAACTgcaag
aaaattggaaaaaatggataATTGctATGCTGTCCGTACTAATCCAGCTG
ATGTTGCACGTGTTGAATCAAAAACGTTGATCTGTACTGAAAATAAACAT
GATACTGTCCCCCACACCAGAGATGGAGTTAGATGTTCAGTTGGACAATG
GACTGAGCCTAAAGAAATGAAGGAAAAGCTCCAAGGATTATTCCAAGGAT
GCATGAAGGctATGCTGTCCGTACTAATCCAGCTGATGTTGCACGTGTTG
AATCAAAAACGTTGATCTGTACTGAAAATAAACATGATACTGTCCCCCAC
ACCAGAGATGGAGTTAGATGTTCAGTTGGACAATGGACTGAGCCTAAAGA
AATGAAGGAAAAGCTCCAAGGATTATTCCAAGGATGCATGAAGGGAAGAA
CCATGTatgttattccattttcaatgGGACCTGTTGGCTCTCCTTTGTCC
AAAATTGGTATTGAACTTACTGATTCTCCATATGTCTCAATGTCTATGGG
TGTTATGACTAGAATGGGATCAAAAGTATTGAATTCTCTGGGTGATGGTG
ATTTTGTCAAATGTTCTCACTCTGTTGGACAACCTTTACCTCTTGAAAAA
CCAGACCCATATAACTGGCCATGTAATCCAGAAAAGACTGTTATCACACA
TTTCCCAGCTGACAGAGAAATCATCTCCTTTGGATCTGGTTATGGTGGAA
ACTCACTTcttggaaagaaatgttttgcTTTGAGAATCGCATCTGCTGTT
GCTAGAGATGAAGGATGGTTAGCTGAACACATGCTGGAAGAACCATGTat
gttattccattttcaatgGGACCTGTTGGCTCTCCTTTGTCCAAAATTGG
TATTGAACTTACTGATTCTCCATATGTCTCAATGTCTATGGGTGTTATGA
CTAGAATGGGATCAAAAGTATTGAATTCTCTGGGTGATGGTGATTTTGTC
AAATGTTCTCACTCTGTTGGACAACCTTTACCTCTTGAAAAACCAGACCC
ATATAACTGGCCATGTAATCCAGAAAAGACTGTTATCACACATTTCCCAG
CTGACAGAGAAATCATCTCCTTTGGATCTGGTTATGGTGGAAACTCACTT
cttggaaagaaatgttttgcTTTGAGAATCGCATCTGCTGTTGCTAGAGA
TGAAGGATGGTTAGCTGAACACATGCTGATCCTTGGATTGACTAACCCAC
AAGGTGAAAAGAAATATGTTGCTGCTGCATTTCCAAGTGCTTGTGGAAAG
ACAAACTTAGCTATGTTAACCCCAACTTTACCAGGATGGAAAGCAGAATG
TGTCGGTGATGATATTGCATGGATGAAATTTGACGAGGAAGGTGTCTTGA
GAGCTATTAATCCAGAATATGGATTCTTTGGTGTTGCCCCCGGAACCTCA
ATGGAAACCAACCCACAAGCATTAATTGCTTGTCAGAAGAACACTGTCTT
TACTAACTGCGCTACTACTGATGATGGTGAAATCTACTGGGAAGATCCTT
GGATTGACTAACCCACAAGGTGAAAAGAAATATGTTGCTGCTGCATTTCC
AAGTGCTTGTGGAAAGACAAACTTAGCTATGTTAACCCCAACTTTACCAG
GATGGAAAGCAGAATGTGTCGGTGATGATATTGCATGGATGAAATTTGAC
GAGGAAGGTGTCTTGAGAGCTATTAATCCAGAATATGGATTCTTTGGTGT
TGCCCCCGGAACCTCAATGGAAACCAACCCACAAGCATTAATTGCTTGTC
AGAAGAACACTGTCTTTACTAACTGCGCTACTACTGATGATGGTGAAATC
TACTGGGAAGGTCTTGAAAAGGAAGTCAACCTTGAAGGTCGTTCAGTCAC
TGACTGGTTGGGTAAACCATGGACTAAAGAATCTGGAACAAAAGCTGCTC
ATCCAAACTCTCGATTCTGTACGCCAGCTGGAAATTGCAAAGTTATCGAT
CCACTTTGGGAAGATCCTAAAGGTGTCCCAATCTCTGCTATCTTGTTTGG
TGGACGCCGACCAGAAGGTGTGCCATTGATCTACGAAGCATTTAATTGGC
AACATGGTGTGTTTGTTGCAAGTGCTCTTTGCTCTGAAACGACGGCTGCT
GCAGAACACAAAGGCAAAGCTATAATGAGAGATCCCTTCGCCATGAGACC
ATTCTTTGGATATAACGCTGGACATTACTTTAAACACTGGTTGAGTCTTG
AAGATGATAAGAAACATCAATTACCTAAAATTTTCCATGTCAACTGGTTC
AGAAAAGGAGAAGACGGCAAATTCCTATGGCCTGGTCTTGAAAAGGAAGT
CAACCTTGAAGGTCGTTCAGTCACTGACTGGTTGGGTAAACCATGGACTA
AAGAATCTGGAACAAAAGCTGCTCATCCAAACTCTCGATTCTGTACGCCA
GCTGGAAATTGCAAAGTTATCGATCCACTTTGGGAAGATCCTAAAGGTGT
CCCAATCTCTGCTATCTTGTTTGGTGGACGCCGACCAGAAGGTGTGCCAT
TGATCTACGAAGCATTTAATTGGCAACATGGTGTGTTTGTTGCAAGTGCT
CTTTGCTCTGAAACGACGGCTGCTGCAGAACACAAAGGCAAAGCTATAAT
GAGAGATCCCTTCGCCATGAGACCATTCTTTGGATATAACGCTGGACATT
ACTTTAAACACTGGTTGAGTCTTGAAGATGATAAGAAACATCAATTACCT
AAAATTTTCCATGTCAACTGGTTCAGAAAAGGAGAAGACGGCAAATTCCT
ATGGCCTGGATTCGGTGAAAACTGTCGTGTCTTGAAATGGGTTTTCGATC
GCGTCGACGGCAAACACGGAGTCCACAAAAATCCACCGTCGGATATTTAC
CTGAAAATGACGCATTAGACTTAAATGGACTAGATGAAGATTTAAATATG
AAAGAACTAATGTCTGTTCCCACTGACTATTGGATGGAACAACTAGATGA
TATtgagaaatattataatcaacAATTTGGTGAAGATATTCCACAACAAT
TATGGGATGAAGTACATTCTTTCAGGGAACGATTGACAAAATCTCCTACC
GCCGCTTAAGATTCGGTGAAAACTGTCGTGTCTTGAAATGGGTTTTCGAT
CGCGTCGACGGCAAACACGGAGTCCACAAAAATCCACCGTCGGATATTTA
CCTGAAAATGACGCATTAGACTTAAATGGACTAGATGAAGATTTAAATAT
GAAAGAACTAATGTCTGTTCCCACTGACTATTGGATGGAACAACTAGATG
ATATtgagaaatattataatcaacAATTTGGTGAAGATATTCCACAACAA
TTATGGGATGAAGTACATTCTTTCAGGGAACGATTGACAAAATCTCCTAC
CGCCGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:451721..455437 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1720-1953:3484 |
| Aaloc | 1657-1719:3419 |
| Aaloc | 1183-1653:2716 |
| Aaloc | 865-1179:2211 |
| Aaloc | 475-864:1712 |
| Aaloc | 289-471:1395 |
| Aaloc | 31-285:1016 |
| Aaloc | 1-27:1 |
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