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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:426031..430203+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045229 ID=XLOC_045229|Name=XLOC_045229|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4173bp|location=Sequence derived from alignment at sc0000031_pilon:426031..430203+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtGGTGGCGCGCTACATCATTAATGACAGAAGACCTGAAGAGATCTTC
GAAAGTAAGACTTTCAAAGGGCTTTTATCgtggtgaaaatcaaattaaaa
gttatgaatCAGGCTGTGGAAACACACCGAAAGACGACGAGTTGTGTCAG
ATCCATAGAACATTAATCAGCTACAAGGATGTTACCCTTCCTGACAAGAT
TTACGGTGGCCGAAACAAACAGTCATACATTGTTACCGATGACAACAAAT
CCCTTCAAAGAAAGGTTTGTTTATTGAGTCTATAATTACAATATTCGGCT
ATCACGAAGTAAAGAATATTCTAGTTCTATTCTTCTAATCTAGTAGTTTT
GGTTAAAACCATATCTTCTACCCCTACAACAACAGCCGCCTACCCAAGAG
GAGCAACCCAACATCAATTGATAAGAATTTTCACTTACTTTAGGGACAGT
AAGTTAGGTACagctttttggcttttagaaaaaaGTCGATTGATATACTT
GGAAAACTGCCGTCTTATTCCGGACCATGTTTTTGTTTGCTGTGCAATAT
ATGACTTTCGAAAGGACTGTTTTTAGGCTTGAAGATAACTCTCACATTAG
TCCATGCAAACATTGATGCATTTTGTTACCCCTGACCTAAACACTAAAGG
TGTGGCCTCAGCCTTAGTAAAATTAGAGCTCAGTCCTTTTATGGGCTTAT
TCATCCGCGAACTCCGacttaaacatttttcaaaaatgttatagATTATG
AAGGAGTTGAATGTCGGCCCATTGGAATTCAGCATTGCGATGAAGACTTA
TCAAAATGTCGTCACAGTTCAGAATGAGGAAAACATACAGGAAGATGTAT
ACGTAGGAGGAATAGAAGGCATAAATACGTCTCCAACAGATAGTGAGAAC
AATACTAAAGTACAGAGAAGTAAAGATACTTCTCCACCAAATGATTTAGC
TCTTATGGAAGAACTTTGTACAATCAAAGGTGATTATGGTAAAATGAAAG
GTGACTACGACAGCATTGTGGACAGGAACACGGCAGCTGAGACTGAGATC
CGGCGATTATCTTTGGTCAAAGAAGAATCCGATCTTGTACATCGTGAAGA
GGCAGATGCTTTGTGCAACACGATCGatgatttgaataaaaaattgacaa
cgGCTCGTAAAGAGGTTGAAGAGATGGGCATGGATATCAAGGAATGTATA
GCCGATACTACCTCTCAGTTGAAACAACACTTTGACGTGTTATTGGCcga
agaaaaagaacaaaaccAAGCCCTTCTAGCAAAAAAGGAGGCTGATATTT
GTGAAAAAGACTCTcaaatctttgaaataaaaaaatattttgagaggGAG
CTAGATGCCGTGAAAGAACAAGGAGTGAAACGTTTAGAAAGAATGCtttc
tattgaaaaagaaaaatcggaGATGGATCAAAAAACTATTCAAGAGCTTC
GTAAAAGCTTGGATGCCGATCAAAAAATACTCCTTGATAAACAACACTCC
TTACAGCAGCAAACGGAATTAGTAAATGGCCAGGCCTCTCAGCTCGTAGA
ATTGAATGACAAGAAAGCTGTCATCAAGAAGAAATTGTTTAAGGCTACCA
AAGAGGTCAAGGAAGCTAAAGATAAGGTAGCCCAGGGTCAAGAAGCGTTT
AACAAACAACAACAGGAGCTGGAAGATCTAAACGCAATTAATGAGATATT
GACAAAGAGTAACGAGGAAGAGCGTAAGAAACATATTGAAGAACTGACAC
AAAAAGAAAGCGAGTTGGTTAAGATGTGCGACAGTTCCAAACAGCAACTC
AACATCAGCGAACAAAAAATGGGATTGCTCAAGACAGAGAATGATGCATT
GAAATTAGCGCAAGTCGAATCTGAATTAACACATGCGGCAGAGATGGCGA
AACAGAATGAAGTATTGGTCCGTGCGAAAAACGCTCACAAGGACGAGATT
GGTGAAGCCAAGGAGCAGATTGACCAGTTGAAGAGAGAAGCGGGCCAGAT
GGATTTCATGCACCAGGAGACATTGGCTGTAAAATATGGCAACCTGGAAG
AATCTGAATTGACAATTTGtttcttacaaaaagaaaaagcaataTGTGAA
AAGAAACTAGAGACTGCATCGAAAAGTGTTCTTTGTTTGGAGAAGAGATT
AAACCAACGTGAAGTCGAGATTCGTGCTCGTTTGGAAGATATTTCTgcac
aaaagaagaaagaaaatgcgGACAAAGCTACTATCGAAAAACAAAAGGTC
TCTATGGAGAAAATCCAGAACGATTTGAAACGTGAAAAGAAGAGGATCGA
ATCTTTGATCCGTGAACGTAATGCATACAGAGATGAAGTAAGATCTCAGC
ATTTTATTCTAATAAATTGACATCGATCAGAATCCAATTAAAATAAATCT
TTAGGAACTGAATAGCTAGGTTTTCCTTAAGAATAAATATTTATTGAgta
aatcattttttgtttaaatgatTGTTGGTTAATCAGTATAAACGCTACaa
tagagtctctttaactcgaacctctataactcgattaTCTCCTTAATTTT
TATTGTCCCTCCAGTCAACAATGCtttaaaccttactccataactcataA
TGTTCTTAACTCAAACACATTTGAGTAATGGAGGGTCAACTGGACTTACT
GTGCTTCGTACACATCcaaataaacttttacaatacaaaatacgagaaaa
aaatataacaatataggcgaaaataaaaaaatgtagtgtttccggagtGC
Ggaaaggaaaaaagctctcatgcggccggccggaaaatttttttttgcta
tttttgataacttaagatcattgaaatataactttaaagataacctttat
gtaaaaatagtatggagtaagccctgaatactaatatCTCAACTACCAAC
AAAAGTCTGCAGCtgggtcagaaaatttttttttttcacccggccagTTT
CCGGAAACATActacatatttttattttcgcctaaggTATAGATCGATAT
TGATCGCAGGTATTGGGAATGTTCCTCATCTAATAAAAACTTGTCTTTAG
GCAACCAGTAATTTCTTTCGAACATTTCTAGAGGGGAGACCGTCTTGATT
ATGTCTGggttatcaaaattatatttaaatatttctttttaggCTCACAC
GAATAGCATACAAAAGATTGAAGCTAACAAAAAGCTTGAGGCTACTAAAG
AACACTTGCAAACGGTTAAGAAAGAATATGAGTGTAAAATTGCTCAAATG
CAACCTATCCAAGAGACAAAGGCAGTGGGCaagcaaaagcaaaagaaacg
aaagagaaaatcaaaacaggtTGCTTCCAACGACATCGAAGCAAACACAC
TTACTATTGCTACACAAACTAATAAAGAACTTACAAACCCACAAGAAGCA
AAGCGTAACGATTTAAACGAAGATCGACCAAAGAAGTCAGATCTAGATAA
TGGGAAGATTCAGAAAGTCGCTAAAGTACAAAAAAGGTATCTAAGCTAAT
GATGAATAAATCGAACGATAGAATCTTGGACTACTATATAGTTCACCTGT
TTCCTTTCTGCTTCTAGACATTTTCGATCACTGAATGcccccccccttct
cacagacccggtaggatttttccagCCAGTagaggtaaaaataacggacc
aaaactcaatggagattgatattcccatgtttttaatTGCTGGGGAATTG
AATTCCgttgttttcgagccagaaaattcagtggggatggaaaaaatagc
acaatattttacagtgagaatttgcttatctgattatttttagcggggac
aaaaatttgagtagaattttccaccggggacgatattttggctagttttt
ccagtgggaagggttcccagtgggtctgtgagaagggattGTTGAATAGA
TCTTGCCTCGCAACCCTTTTACAATGTCCAGATTGGTAAAGCTTGCTTTC
CATTAAACATCATCACTActgattttttagttttgttcaaCGAAAAAGTC
CATCAACAATATCTAAAAACATTGTAAGCAAATCAGACGTTATTTTCGAC
CAACATGACAACGAAAGACCCTGGGGTGTATATGACACTTCACTTGTCAC
CTTTTGTATCGGAATATGGTTTCTTCTCATCAAGGTCTGCAGCATTGTCA
CCAACGATGATTCACTCTGGTAG Coding sequence (CDS) from alignment at sc0000031_pilon:426031..430203+ >XLOC_045229 ID=XLOC_045229|Name=XLOC_045229|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4788bp|location=Sequence derived from alignment at sc0000031_pilon:426031..430203+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtGGTGGCGCGCTACATCATTAATGACAGAAGACCTGAAGAGATCTTC
GAAAGTAAGACTTTCAAAGGGCTTTTATCgtggtgaaaatcaaattaaaa
gttatgaatCAGGCTGTGGAAACACACCGAAAGACGACGAGTTGTGTCAG
ATCCATAGAACATTAATCAGCTACAAGGATGTTACCCTTCCTGACAAGAT
TTACGGTGGCCGAAACAAACAGTCATACATTGTTACCGATGACAACAAAT
CCCTTCAAAGAAAGatgtGGTGGCGCGCTACATCATTAATGACAGAAGAC
CTGAAGAGATCTTCGAAAGTAAGACTTTCAAAGGGCTTTTATCgtggtga
aaatcaaattaaaagttatgaatCAGGCTGTGGAAACACACCGAAAGACG
ACGAGTTGTGTCAGATCCATAGAACATTAATCAGCTACAAGGATGTTACC
CTTCCTGACAAGATTTACGGTGGCCGAAACAAACAGTCATACATTGTTAC
CGATGACAACAAATCCCTTCAAAGAAAGATTATGAAGGAGTTGAATGTCG
GCCCATTGGAATTCAGCATTGCGATGAAGACTTATCAAAATGTCGTCACA
GTTCAGAATGAGGAAAACATACAGGAAGATGTATACGTAGGAGGAATAGA
AGGCATAAATACGTCTCCAACAGATAGTGAGAACAATACTAAAGTACAGA
GAAGTAAAGATACTTCTCCACCAAATGATTTAGCTCTTATGGAAGAACTT
TGTACAATCAAAGGTGATTATGGTAAAATGAAAGGTGACTACGACAGCAT
TGTGGACAGGAACACGGCAGCTGAGACTGAGATCCGGCGATTATCTTTGG
TCAAAGAAGAATCCGATCTTGTACATCGTGAAGAGGCAGATGCTTTGTGC
AACACGATCGatgatttgaataaaaaattgacaacgGCTCGTAAAGAGGT
TGAAGAGATGGGCATGGATATCAAGGAATGTATAGCCGATACTACCTCTC
AGTTGAAACAACACTTTGACGTGTTATTGGCcgaagaaaaagaacaaaac
cAAGCCCTTCTAGCAAAAAAGGAGGCTGATATTTGTGAAAAAGACTCTca
aatctttgaaataaaaaaatattttgagaggGAGCTAGATGCCGTGAAAG
AACAAGGAGTGAAACGTTTAGAAAGAATGCtttctattgaaaaagaaaaa
tcggaGATGGATCAAAAAACTATTCAAGAGCTTCGTAAAAGCTTGGATGC
CGATCAAAAAATACTCCTTGATAAACAACACTCCTTACAGCAGCAAACGG
AATTAGTAAATGGCCAGGCCTCTCAGCTCGTAGAATTGAATGACAAGAAA
GCTGTCATCAAGAAGAAATTGTTTAAGGCTACCAAAGAGGTCAAGGAAGC
TAAAGATAAGGTAGCCCAGGGTCAAGAAGCGTTTAACAAACAACAACAGG
AGCTGGAAGATCTAAACGCAATTAATGAGATATTGACAAAGAGTAACGAG
GAAGAGCGTAAGAAACATATTGAAGAACTGACACAAAAAGAAAGCGAGTT
GGTTAAGATGTGCGACAGTTCCAAACAGCAACTCAACATCAGCGAACAAA
AAATGGGATTGCTCAAGACAGAGAATGATGCATTGAAATTAGCGCAAGTC
GAATCTGAATTAACACATGCGGCAGAGATGGCGAAACAGAATGAAGTATT
GGTCCGTGCGAAAAACGCTCACAAGGACGAGATTGGTGAAGCCAAGGAGC
AGATTGACCAGTTGAAGAGAGAAGCGGGCCAGATGGATTTCATGCACCAG
GAGACATTGGCTGTAAAATATGGCAACCTGGAAGAATCTGAATTGACAAT
TTGtttcttacaaaaagaaaaagcaataTGTGAAAAGAAACTAGAGACTG
CATCGAAAAGTGTTCTTTGTTTGGAGAAGAGATTAAACCAACGTGAAGTC
GAGATTCGTGCTCGTTTGGAAGATATTTCTgcacaaaagaagaaagaaaa
tgcgGACAAAGCTACTATCGAAAAACAAAAGGTCTCTATGGAGAAAATCC
AGAACGATTTGAAACGTGAAAAGAAGAGGATCGAATCTTTGATCCGTGAA
CGTAATGCATACAGAGATGAAATTATGAAGGAGTTGAATGTCGGCCCATT
GGAATTCAGCATTGCGATGAAGACTTATCAAAATGTCGTCACAGTTCAGA
ATGAGGAAAACATACAGGAAGATGTATACGTAGGAGGAATAGAAGGCATA
AATACGTCTCCAACAGATAGTGAGAACAATACTAAAGTACAGAGAAGTAA
AGATACTTCTCCACCAAATGATTTAGCTCTTATGGAAGAACTTTGTACAA
TCAAAGGTGATTATGGTAAAATGAAAGGTGACTACGACAGCATTGTGGAC
AGGAACACGGCAGCTGAGACTGAGATCCGGCGATTATCTTTGGTCAAAGA
AGAATCCGATCTTGTACATCGTGAAGAGGCAGATGCTTTGTGCAACACGA
TCGatgatttgaataaaaaattgacaacgGCTCGTAAAGAGGTTGAAGAG
ATGGGCATGGATATCAAGGAATGTATAGCCGATACTACCTCTCAGTTGAA
ACAACACTTTGACGTGTTATTGGCcgaagaaaaagaacaaaaccAAGCCC
TTCTAGCAAAAAAGGAGGCTGATATTTGTGAAAAAGACTCTcaaatcttt
gaaataaaaaaatattttgagaggGAGCTAGATGCCGTGAAAGAACAAGG
AGTGAAACGTTTAGAAAGAATGCtttctattgaaaaagaaaaatcggaGA
TGGATCAAAAAACTATTCAAGAGCTTCGTAAAAGCTTGGATGCCGATCAA
AAAATACTCCTTGATAAACAACACTCCTTACAGCAGCAAACGGAATTAGT
AAATGGCCAGGCCTCTCAGCTCGTAGAATTGAATGACAAGAAAGCTGTCA
TCAAGAAGAAATTGTTTAAGGCTACCAAAGAGGTCAAGGAAGCTAAAGAT
AAGGTAGCCCAGGGTCAAGAAGCGTTTAACAAACAACAACAGGAGCTGGA
AGATCTAAACGCAATTAATGAGATATTGACAAAGAGTAACGAGGAAGAGC
GTAAGAAACATATTGAAGAACTGACACAAAAAGAAAGCGAGTTGGTTAAG
ATGTGCGACAGTTCCAAACAGCAACTCAACATCAGCGAACAAAAAATGGG
ATTGCTCAAGACAGAGAATGATGCATTGAAATTAGCGCAAGTCGAATCTG
AATTAACACATGCGGCAGAGATGGCGAAACAGAATGAAGTATTGGTCCGT
GCGAAAAACGCTCACAAGGACGAGATTGGTGAAGCCAAGGAGCAGATTGA
CCAGTTGAAGAGAGAAGCGGGCCAGATGGATTTCATGCACCAGGAGACAT
TGGCTGTAAAATATGGCAACCTGGAAGAATCTGAATTGACAATTTGtttc
ttacaaaaagaaaaagcaataTGTGAAAAGAAACTAGAGACTGCATCGAA
AAGTGTTCTTTGTTTGGAGAAGAGATTAAACCAACGTGAAGTCGAGATTC
GTGCTCGTTTGGAAGATATTTCTgcacaaaagaagaaagaaaatgcgGAC
AAAGCTACTATCGAAAAACAAAAGGTCTCTATGGAGAAAATCCAGAACGA
TTTGAAACGTGAAAAGAAGAGGATCGAATCTTTGATCCGTGAACGTAATG
CATACAGAGATGAAgCTCACACGAATAGCATACAAAAGATTGAAGCTAAC
AAAAAGCTTGAGGCTACTAAAGAACACTTGCAAACGGTTAAGAAAGAATA
TGAGTGTAAAATTGCTCAAATGCAACCTATCCAAGAGACAAAGGCAGTGG
GCaagcaaaagcaaaagaaacgaaagagaaaatcaaaacaggtTGCTTCC
AACGACATCGAAGCAAACACACTTACTATTGCTACACAAACTAATAAAGA
ACTTACAAACCCACAAGAAGCAAAGCGTAACGATTTAAACGAAGATCGAC
CAAAGAAGTCAGATCTAGATAATGGGAAGATTCAGAAAGTCGCTAAAGTA
CAAAAAAGgCTCACACGAATAGCATACAAAAGATTGAAGCTAACAAAAAG
CTTGAGGCTACTAAAGAACACTTGCAAACGGTTAAGAAAGAATATGAGTG
TAAAATTGCTCAAATGCAACCTATCCAAGAGACAAAGGCAGTGGGCaagc
aaaagcaaaagaaacgaaagagaaaatcaaaacaggtTGCTTCCAACGAC
ATCGAAGCAAACACACTTACTATTGCTACACAAACTAATAAAGAACTTAC
AAACCCACAAGAAGCAAAGCGTAACGATTTAAACGAAGATCGACCAAAGA
AGTCAGATCTAGATAATGGGAAGATTCAGAAAGTCGCTAAAGTACAAAAA
AGttttgttcaaCGAAAAAGTCCATCAACAATATCTAAAAACATTGTAAG
CAAATCAGACGTTATTTTCGACCAACATGACAACGAAAGACCCTGGGGTG
TATATGACACTTCACTTGTCACCTTTTGTATCGGAATATGGTTTCTTCTC
ATCAAGGTCTGCAGCATTGTCACCAACGATGATTCACTCTGGTAGttttg
ttcaaCGAAAAAGTCCATCAACAATATCTAAAAACATTGTAAGCAAATCA
GACGTTATTTTCGACCAACATGACAACGAAAGACCCTGGGGTGTATATGA
CACTTCACTTGTCACCTTTTGTATCGGAATATGGTTTCTTCTCATCAAGG
TCTGCAGCATTGTCACCAACGATGATTCACTCTGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:426031..430203 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2203-2394:3982 |
| Aaloc | 1858-2199:3143 |
| Aaloc | 265-1857:745 |
| Aaloc | 1-264:1 |
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