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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:363687..365929+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045227 ID=XLOC_045227|Name=XLOC_045227|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2243bp|location=Sequence derived from alignment at sc0000031_pilon:363687..365929+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaatgttgaaatcgTTATTGTGCTATTATCTGGTTTTAAGTTGTAT
ATCCTATACACTTACTTTTACTGCCAAGACTGTTCCAATTATAAAAGTTG
AGGGAAAAGGTGGTGATTTACTTGACAATCTAAAGAAACCACAGAAAGTT
TTATTGGTGTCTATCGATGGTTTCCGTTGGGATTTACACAAAATAACCGA
TACACCAAATATTGATCGAGTGATTAAAAATGGAGTAACAGTAGATCACG
TGTTAAATGTTTTTCCAACTAAAACATTACCCAACCATCAAAGTATTGTA
ACAGGGCTTTTCCCTGAGCATCATGGCATGGTTGATAATGATTTTATGGA
TCGAAAAACTGGTGCTAGATTCTATCTGGCAAGCGATGACTGTATGACTA
ATACCACGTGGTGGGATCAAAGTCTTCCAATCTGGATTCAAATTCAACGC
AAAATGGGTTACAAAACTGGCAATCTCTTTTGGCCTGGTTATAGAGTTCC
TTATAAGAATTACCTAAGAGATAAAAATCATCCAGTCAATGAAACAGCAT
TTTTCCTACCATccagaaaacattcgaaagactATGAAGGTGGTAAAGGC
GATTATAAGAAATCCTTATACAAGGCTATGCACAAAGCTTATAGATGGTT
GAAAAGAGATGATACGATCTTTGTATCTTTATACTCAATGGAGCCGGATA
CCACTTTACATGAGAATGGTGTGGAGCATGATAAAGTGAAACGGGAAGTC
GAAAAGGTGGATCAATTTGTGGGAGCGATTTATGATAGGATTACCAGGGA
TGAGAAATTGAAAGACCAAGTCAATGTTATCTTTGTCGGTAAGTCATACT
ACTTTGGGCGTACGtttttttCACGTATCTTGcacttgttcttaaaaaat
aattttcaacatattctcaaaatttgtaaatttttacgCCCACTTATTGT
CTCCGATTCGGAGAATCTTTCTGACTTGAAGTCGACATTGGTTTTTGTAA
TATCAGCAGCAAAGAGAAGTTTGATTTTTATGGGATCGCCaaggggctgg
cgtgacacgtgaatgaACCtttttttCTGCCGTGAATACATGAATTGAAA
TATCAGCGTGTAAGTGaaaataagatattttttgcgtgaatacgtgaatt
ggctaAAATTTATACGTggatacgtgaattgagggtcgacttGGGGGCCT
TTTTAGTGTAAAACTTCCAAAGAACCCTTAAAGAAGAACCTCTGAAAGTT
TAATCAAACTTCTTGAAATCTTAATATTGGaagttaattattttttattt
tctctctgAAGGCGACCATGGTCATATCACAACAACGTCTGACCGAATGA
TCGACCTTTCAAGGCTCGTCAACCTTAAGGATGACATCGAAGGGCTTTTT
GGATTCACAAACGTTTTCCTATATACCAAACCAAACAAGACCGCCAAAGT
GtacaagaaattgaagaaattcaGTGAGAAATCGACCACTTTTAgagtgt
ttttgaaaaaagatatccCAAAGTATTTACACGTTGGCAATAATTCAAGG
ACAGGTGATATATTGATTTTACCGGAACCTGGATGGATTGTCGTTGATAA
AACGGCATTAGCGGAATATTTACAGAAACCGAACTGGATTAGGTCAGAGC
ATGGTTATGATAGTTTAAACCGAGAAATGAATCCGGGCTTTTTTGCTTTT
GGTCCTATGTTCAAGAAAGGTTTTAAAAAGCCTTGTATCAAAACTGTAGA
TTTATATGGATTGATGTGCAAAATACTGGGTATGGAACCAAGCCAAAACG
ATGGAAAATTTGAGAGAGTAAAACCACTATTGGCAACCAAACAAAAACTG
AGGAAAAAGAAGGGCAATAGGAAGAAAGCGTCTCAGAGAGGAACTATTCA
AAAAGTGACATCAGTTAAGGGGAAAATTCAAGGGACAAAGAACATGggga
aaatcattttcaaaaagaaaaaacaaaaaagcaaaaataaccaatcaaaa
acaaagaatgacaaaagccgaaatgaagatgaagatgaaaaaaagcaGGA
TCAAGacgaagaagatgaaaaagacGGAGGTGATGAATATGACGAAGACG
ACGACATAGATGACGTAACcagtgaagatgaagatgacGTAATCAGTGGA
GAcgacgatgacgtcattgatgatgatgacgacGATTACGGTGACAATGG
AGGGGAATATGATAGCGATGAATTCCCGATCGTatgtaaataa Coding sequence (CDS) from alignment at sc0000031_pilon:363687..365929+ >XLOC_045227 ID=XLOC_045227|Name=XLOC_045227|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3540bp|location=Sequence derived from alignment at sc0000031_pilon:363687..365929+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaatgttgaaatcgTTATTGTGCTATTATCTGGTTTTAAGTTGTAT
ATCCTATACACTTACTTTTACTGCCAAGACTGTTCCAATTATAAAAGTTG
AGGGAAAAGGTGGTGATTTACTTGACAATCTAAAGAAACCACAGAAAGTT
TTATTGGTGTCTATCGATGGTTTCCGTTGGGATTTACACAAAATAACCGA
TACACCAAATATTGATCGAGTGATTAAAAATGGAGTAACAGTAGATCACG
TGTTAAATGTTTTTCCAACTAAAACATTACCCAACCATCAAAGTATTGTA
ACAGGGCTTTTCCCTGAGCATCATGGCATGGTTGATAATGATTTTATGGA
TCGAAAAACTGGTGCTAGATTCTATCTGGCAAGCGATGACTGTATGACTA
ATACCACGTGGTGGGATCAAAGTCTTCCAATCTGGATTCAAATTCAACGC
AAAATGGGTTACAAAACTGGCAATCTCTTTTGGCCTGGTTATAGAGTTCC
TTATAAGAATTACCTAAGAGATAAAAATCATCCAGTCAATGAAACAGCAT
TTTTCCTACCATccagaaaacattcgaaagactATGAAGGTGGTAAAGGC
GATTATAAGAAATCCTTATACAAGGCTATGCACAAAGCTTATAGATGGTT
GAAAAGAGATGATACGATCTTTGTATCTTTATACTCAATGGAGCCGGATA
CCACTTTACATGAGAATGGTGTGGAGCATGATAAAGTGAAACGGGAAGTC
GAAAAGGTGGATCAATTTGTGGGAGCGATTTATGATAGGATTACCAGGGA
TGAGAAATTGAAAGACCAAGTCAATGTTATCTTTGTCGatgaaaatgttg
aaatcgTTATTGTGCTATTATCTGGTTTTAAGTTGTATATCCTATACACT
TACTTTTACTGCCAAGACTGTTCCAATTATAAAAGTTGAGGGAAAAGGTG
GTGATTTACTTGACAATCTAAAGAAACCACAGAAAGTTTTATTGGTGTCT
ATCGATGGTTTCCGTTGGGATTTACACAAAATAACCGATACACCAAATAT
TGATCGAGTGATTAAAAATGGAGTAACAGTAGATCACGTGTTAAATGTTT
TTCCAACTAAAACATTACCCAACCATCAAAGTATTGTAACAGGGCTTTTC
CCTGAGCATCATGGCATGGTTGATAATGATTTTATGGATCGAAAAACTGG
TGCTAGATTCTATCTGGCAAGCGATGACTGTATGACTAATACCACGTGGT
GGGATCAAAGTCTTCCAATCTGGATTCAAATTCAACGCAAAATGGGTTAC
AAAACTGGCAATCTCTTTTGGCCTGGTTATAGAGTTCCTTATAAGAATTA
CCTAAGAGATAAAAATCATCCAGTCAATGAAACAGCATTTTTCCTACCAT
ccagaaaacattcgaaagactATGAAGGTGGTAAAGGCGATTATAAGAAA
TCCTTATACAAGGCTATGCACAAAGCTTATAGATGGTTGAAAAGAGATGA
TACGATCTTTGTATCTTTATACTCAATGGAGCCGGATACCACTTTACATG
AGAATGGTGTGGAGCATGATAAAGTGAAACGGGAAGTCGAAAAGGTGGAT
CAATTTGTGGGAGCGATTTATGATAGGATTACCAGGGATGAGAAATTGAA
AGACCAAGTCAATGTTATCTTTGTCGGCGACCATGGTCATATCACAACAA
CGTCTGACCGAATGATCGACCTTTCAAGGCTCGTCAACCTTAAGGATGAC
ATCGAAGGGCTTTTTGGATTCACAAACGTTTTCCTATATACCAAACCAAA
CAAGACCGCCAAAGTGtacaagaaattgaagaaattcaGTGAGAAATCGA
CCACTTTTAgagtgtttttgaaaaaagatatccCAAAGTATTTACACGTT
GGCAATAATTCAAGGACAGGTGATATATTGATTTTACCGGAACCTGGATG
GATTGTCGTTGATAAAACGGCATTAGCGGAATATTTACAGAAACCGAACT
GGATTAGGTCAGAGCATGGTTATGATAGTTTAAACCGAGAAATGAATCCG
GGCTTTTTTGCTTTTGGTCCTATGTTCAAGAAAGGTTTTAAAAAGCCTTG
TATCAAAACTGTAGATTTATATGGATTGATGTGCAAAATACTGGGTATGG
AACCAAGCCAAAACGATGGAAAATTTGAGAGAGTAAAACCACTATTGGCA
ACCAAACAAAAACTGAGGAAAAAGAAGGGCAATAGGAAGAAAGCGTCTCA
GAGAGGAACTATTCAAAAAGTGACATCAGTTAAGGGGAAAATTCAAGGGA
CAAAGAACATGgggaaaatcattttcaaaaagaaaaaacaaaaaagcaaa
aataaccaatcaaaaacaaagaatgacaaaagccgaaatgaagatgaaga
tgaaaaaaagcaGGATCAAGacgaagaagatgaaaaagacGGAGGTGATG
AATATGACGAAGACGACGACATAGATGACGTAACcagtgaagatgaagat
gacGTAATCAGTGGAGAcgacgatgacgtcattgatgatgatgacgacGA
TTACGGTGACAATGGAGGGGAATATGATAGCGATGAATTCCCGATCGTat
gtaaataaGCGACCATGGTCATATCACAACAACGTCTGACCGAATGATCG
ACCTTTCAAGGCTCGTCAACCTTAAGGATGACATCGAAGGGCTTTTTGGA
TTCACAAACGTTTTCCTATATACCAAACCAAACAAGACCGCCAAAGTGta
caagaaattgaagaaattcaGTGAGAAATCGACCACTTTTAgagtgtttt
tgaaaaaagatatccCAAAGTATTTACACGTTGGCAATAATTCAAGGACA
GGTGATATATTGATTTTACCGGAACCTGGATGGATTGTCGTTGATAAAAC
GGCATTAGCGGAATATTTACAGAAACCGAACTGGATTAGGTCAGAGCATG
GTTATGATAGTTTAAACCGAGAAATGAATCCGGGCTTTTTTGCTTTTGGT
CCTATGTTCAAGAAAGGTTTTAAAAAGCCTTGTATCAAAACTGTAGATTT
ATATGGATTGATGTGCAAAATACTGGGTATGGAACCAAGCCAAAACGATG
GAAAATTTGAGAGAGTAAAACCACTATTGGCAACCAAACAAAAACTGAGG
AAAAAGAAGGGCAATAGGAAGAAAGCGTCTCAGAGAGGAACTATTCAAAA
AGTGACATCAGTTAAGGGGAAAATTCAAGGGACAAAGAACATGgggaaaa
tcattttcaaaaagaaaaaacaaaaaagcaaaaataaccaatcaaaaaca
aagaatgacaaaagccgaaatgaagatgaagatgaaaaaaagcaGGATCA
AGacgaagaagatgaaaaagacGGAGGTGATGAATATGACGAAGACGACG
ACATAGATGACGTAACcagtgaagatgaagatgacGTAATCAGTGGAGAc
gacgatgacgtcattgatgatgatgacgacGATTACGGTGACAATGGAGG
GGAATATGATAGCGATGAATTCCCGATCGTatgtaaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:363687..365929 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 841-1770:1314 |
| Aaloc | 1-837:1 |
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