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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:359551..361964+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045226 ID=XLOC_045226|Name=XLOC_045226|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2414bp|location=Sequence derived from alignment at sc0000031_pilon:359551..361964+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTTTCTTCggaatttttaaagtttttgctgTTTTCACTTTGATGAA
TATAACTCTACCGGTAATGTCAGACAGAAGACCTGAAGAGTCAACCATTT
TGAAGAAACCACAGAAAGTTTTATTGGTGTCTATCGATGGTTTCCGTTGG
GATTTGCACAAAATAACCGACACACCAAATATTGATCGAGTGATCAAAAA
TGGAGTAACAGTAGATCACGTGTTAAATGTTTTTCCAACTAAAACATTAC
CCAATCATCAAAGTATAGTAACAGGGCTTTTCCCTGAGCATCATGGCATG
GTTGATAATGATTTTATTGATAAAGACTTAGGtgctacattttctcttga
aaatcaaaaatgtatGGAGGATCCAAAGTTCTGGCAACAGTCGCTTCCAA
TCTGGATTCAAGTTCAACGCCAAACAAAATACAACACTGGTAATTTATTC
TGGCCAGGCTATAAAGTACCGTATAAAAACTACAATCTATTTTTCAACGG
AACACCAGCATACCACTTCAAAGATAACTACTATAACGAAACATCGACGT
ACCTTCCTTCCAAAAGCCTTCAATTTCTTTACGAAAAGGGTATGGGTGAT
TACAACAAAACATTTTACAAATTAATAGACCAAGCTGTTGAATGGTTGGC
GCAGGATGATGTTATCTTTGTACCTTTATATTCTATGGAACCTGACTTGA
CTTTACATGAGAGTGGAGTCGAACATAAAGATGTGAAAAAACAAATCGAA
CAACTGGATCAATACGTGGGTTTTATTTATGACAATATAACTCGGCATCC
AGCACTGAAAGATCAAGTTAATGTCATCTTTATAGGTAAGCGAGCTGTCA
TCTGAACCAGCGCTTAAACTAGTCTTAGACTCATTCAGGCTATTTCAATA
TCGTTATTTCAAGGGAGCTTATACTCCATAGTGCAACGTGTCGTTTTTGA
CAGTATGCTCTAACTGCTAACAAAGATCAACCGATCCGAGCCTAAAAGAA
GTAAAATGactaaaggttttgtttttacataagtgtttccgtttcatatc
tgacacatatttcatatcaatacagtgtcttgctattgttatattatgct
gatataagcaaaaaatgtttttcttttcctctttctgacaaatcttgctc
catatccgtgtcaatccaatgtgaaaaagcttgtgaattaaaattgatga
gtaataAGCATACTATATCActcttatctaaaaacaaaCCCTTTAATTTA
TTCATACACCCCTTTTCTCGTTTATGATCTAAGATGCTCACTTTTATTTG
TAATATTGCACCCAAAGGTTTCCTCAACGAAAAGTACTGAGTCCTGAGTG
CTTAGCGTGGTAGCGTGGTAGCGTGGTACGGTAATGAATTCTAAAATTTC
CGTAGATATTAGATCTGTTGAAAGACAACCGGGAATGTGATCATTCATTG
GAGTGATTCTTAGCGATTCTACCTTTGAACCTTTGTTCTTCTTTTAGGTG
ATCATGGACATGTGACCACGTCAGCTGATCGAATGATTGACCTATCAAAG
CTCGTCAATATAACACGTGATATCGAGGGAGTTTTTGGATTCACGAACGT
TTTCCTATACATAATGCCTAACAAAACCCGAAAAGTTTATGAACAATTAA
AAAGCAAGGCTGATAAATCGACTTTATTTCGAGTATTTTTAAAAGAGAAC
ATACCAAAATATTTACACATTGGTGATAATTCGAGGACAGGTGATATATT
GATTTTACCAGAGCCTGGATGGATTGTCGTTGACAAGACAAGGTTACCAG
ACTATCTGAAGGAGCCAGACTGGGTGAGATCAGAACATGGCTATGATAGT
ATGAATAGAGACATGAGTCCTGGATTCTTTGCATTCGGACCAATGCTTAA
GAAAGGTTTTAAGAAATTCTGTATCAAGACTGTAGATTTATATGAATTGA
TGTGTAAAATTTTGGGCATTTCGCCTGACCCAAATGATGGTAAATTTGAT
AGAGTGAAACCacttttgatcaaaaataagaATAGAAAGGCTTGGAAATC
TTTAAAAGATAACATCTACGAGGACTGGTCTTTAGATGGAAATTCCTATC
AAAACAATTTAACAATGAATGGCGATTTCAGTGCAAATACAACCTACATA
GACGATAATGTAAAGGATAGAAGTTCATACGTTGGGAATttaacaacaaa
gacaaaattgaATAATGGTAATATTTTAAGAAACGATGACGCCCCAAGTT
TGAAAGATTTCTCGAAAAGATATGAATTTATACAATCGCAAACTTCGAAA
AGTATGAAAAGTGAAAATGGCAACATTAGATTTGAAATCAAATATGATAA
CGatgcaaaagaaagaacaattaACGGGGGTGAGGATGACGATGATTATG
ATAGTAGTAATCAC Coding sequence (CDS) from alignment at sc0000031_pilon:359551..361964+ >XLOC_045226 ID=XLOC_045226|Name=XLOC_045226|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3504bp|location=Sequence derived from alignment at sc0000031_pilon:359551..361964+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTTTCTTCggaatttttaaagtttttgctgTTTTCACTTTGATGAA
TATAACTCTACCGGTAATGTCAGACAGAAGACCTGAAGAGTCAACCATTT
TGAAGAAACCACAGAAAGTTTTATTGGTGTCTATCGATGGTTTCCGTTGG
GATTTGCACAAAATAACCGACACACCAAATATTGATCGAGTGATCAAAAA
TGGAGTAACAGTAGATCACGTGTTAAATGTTTTTCCAACTAAAACATTAC
CCAATCATCAAAGTATAGTAACAGGGCTTTTCCCTGAGCATCATGGCATG
GTTGATAATGATTTTATTGATAAAGACTTAGGtgctacattttctcttga
aaatcaaaaatgtatGGAGGATCCAAAGTTCTGGCAACAGTCGCTTCCAA
TCTGGATTCAAGTTCAACGCCAAACAAAATACAACACTGGTAATTTATTC
TGGCCAGGCTATAAAGTACCGTATAAAAACTACAATCTATTTTTCAACGG
AACACCAGCATACCACTTCAAAGATAACTACTATAACGAAACATCGACGT
ACCTTCCTTCCAAAAGCCTTCAATTTCTTTACGAAAAGGGTATGGGTGAT
TACAACAAAACATTTTACAAATTAATAGACCAAGCTGTTGAATGGTTGGC
GCAGGATGATGTTATCTTTGTACCTTTATATTCTATGGAACCTGACTTGA
CTTTACATGAGAGTGGAGTCGAACATAAAGATGTGAAAAAACAAATCGAA
CAACTGGATCAATACGTGGGTTTTATTTATGACAATATAACTCGGCATCC
AGCACTGAAAGATCAAGTTAATGTCATCTTTATAGATGTGTTTCTTCgga
atttttaaagtttttgctgTTTTCACTTTGATGAATATAACTCTACCGGT
AATGTCAGACAGAAGACCTGAAGAGTCAACCATTTTGAAGAAACCACAGA
AAGTTTTATTGGTGTCTATCGATGGTTTCCGTTGGGATTTGCACAAAATA
ACCGACACACCAAATATTGATCGAGTGATCAAAAATGGAGTAACAGTAGA
TCACGTGTTAAATGTTTTTCCAACTAAAACATTACCCAATCATCAAAGTA
TAGTAACAGGGCTTTTCCCTGAGCATCATGGCATGGTTGATAATGATTTT
ATTGATAAAGACTTAGGtgctacattttctcttgaaaatcaaaaatgtat
GGAGGATCCAAAGTTCTGGCAACAGTCGCTTCCAATCTGGATTCAAGTTC
AACGCCAAACAAAATACAACACTGGTAATTTATTCTGGCCAGGCTATAAA
GTACCGTATAAAAACTACAATCTATTTTTCAACGGAACACCAGCATACCA
CTTCAAAGATAACTACTATAACGAAACATCGACGTACCTTCCTTCCAAAA
GCCTTCAATTTCTTTACGAAAAGGGTATGGGTGATTACAACAAAACATTT
TACAAATTAATAGACCAAGCTGTTGAATGGTTGGCGCAGGATGATGTTAT
CTTTGTACCTTTATATTCTATGGAACCTGACTTGACTTTACATGAGAGTG
GAGTCGAACATAAAGATGTGAAAAAACAAATCGAACAACTGGATCAATAC
GTGGGTTTTATTTATGACAATATAACTCGGCATCCAGCACTGAAAGATCA
AGTTAATGTCATCTTTATAGGTGATCATGGACATGTGACCACGTCAGCTG
ATCGAATGATTGACCTATCAAAGCTCGTCAATATAACACGTGATATCGAG
GGAGTTTTTGGATTCACGAACGTTTTCCTATACATAATGCCTAACAAAAC
CCGAAAAGTTTATGAACAATTAAAAAGCAAGGCTGATAAATCGACTTTAT
TTCGAGTATTTTTAAAAGAGAACATACCAAAATATTTACACATTGGTGAT
AATTCGAGGACAGGTGATATATTGATTTTACCAGAGCCTGGATGGATTGT
CGTTGACAAGACAAGGTTACCAGACTATCTGAAGGAGCCAGACTGGGTGA
GATCAGAACATGGCTATGATAGTATGAATAGAGACATGAGTCCTGGATTC
TTTGCATTCGGACCAATGCTTAAGAAAGGTTTTAAGAAATTCTGTATCAA
GACTGTAGATTTATATGAATTGATGTGTAAAATTTTGGGCATTTCGCCTG
ACCCAAATGATGGTAAATTTGATAGAGTGAAACCacttttgatcaaaaat
aagaATAGAAAGGCTTGGAAATCTTTAAAAGATAACATCTACGAGGACTG
GTCTTTAGATGGAAATTCCTATCAAAACAATTTAACAATGAATGGCGATT
TCAGTGCAAATACAACCTACATAGACGATAATGTAAAGGATAGAAGTTCA
TACGTTGGGAATttaacaacaaagacaaaattgaATAATGGTAATATTTT
AAGAAACGATGACGCCCCAAGTTTGAAAGATTTCTCGAAAAGATATGAAT
TTATACAATCGCAAACTTCGAAAAGTATGAAAAGTGAAAATGGCAACATT
AGATTTGAAATCAAATATGATAACGatgcaaaagaaagaacaattaACGG
GGGTGAGGATGACGATGATTATGATAGTAGTAATCACGTGATCATGGACA
TGTGACCACGTCAGCTGATCGAATGATTGACCTATCAAAGCTCGTCAATA
TAACACGTGATATCGAGGGAGTTTTTGGATTCACGAACGTTTTCCTATAC
ATAATGCCTAACAAAACCCGAAAAGTTTATGAACAATTAAAAAGCAAGGC
TGATAAATCGACTTTATTTCGAGTATTTTTAAAAGAGAACATACCAAAAT
ATTTACACATTGGTGATAATTCGAGGACAGGTGATATATTGATTTTACCA
GAGCCTGGATGGATTGTCGTTGACAAGACAAGGTTACCAGACTATCTGAA
GGAGCCAGACTGGGTGAGATCAGAACATGGCTATGATAGTATGAATAGAG
ACATGAGTCCTGGATTCTTTGCATTCGGACCAATGCTTAAGAAAGGTTTT
AAGAAATTCTGTATCAAGACTGTAGATTTATATGAATTGATGTGTAAAAT
TTTGGGCATTTCGCCTGACCCAAATGATGGTAAATTTGATAGAGTGAAAC
CacttttgatcaaaaataagaATAGAAAGGCTTGGAAATCTTTAAAAGAT
AACATCTACGAGGACTGGTCTTTAGATGGAAATTCCTATCAAAACAATTT
AACAATGAATGGCGATTTCAGTGCAAATACAACCTACATAGACGATAATG
TAAAGGATAGAAGTTCATACGTTGGGAATttaacaacaaagacaaaattg
aATAATGGTAATATTTTAAGAAACGATGACGCCCCAAGTTTGAAAGATTT
CTCGAAAAGATATGAATTTATACAATCGCAAACTTCGAAAAGTATGAAAA
GTGAAAATGGCAACATTAGATTTGAAATCAAATATGATAACGatgcaaaa
gaaagaacaattaACGGGGGTGAGGATGACGATGATTATGATAGTAGTAA
TCAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:359551..361964 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 838-1752:1500 |
| Aaloc | 1-834:1 |
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