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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:214586..223607+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045217 ID=XLOC_045217|Name=XLOC_045217|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9022bp|location=Sequence derived from alignment at sc0000031_pilon:214586..223607+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCAGTCGgtaag
ttttcaagaaaatattttttaaatttgaaagatCCTGTAATTCACACAGA
ATTATGATTATGATTTCTTTTAAATTAGTAATACTATTGTTCTACATCGC
TTCTTAATAAAAGACTTGAAGTGTGTAGGAATCTTTCCATCTCAGTCAAC
CCGGTCGTGAATCGCCACCAAGTTCTACTAAAGCATGGGTAAAGTAAAGC
ATAGGTTTATTGAAGTGATTGCTTCCATTAATATTCTATCAATCATTTGG
TTTTTCTATTTAATGTCTAGGTAGGGCTGGCTGACGAtttttttCGAACC
AAAAACAATTCTTGAAATTGTTCGGAtatcccctggaaaatggcaaaatt
tgcaaaaaaaaaggaaatatagGCAGACAATTCTTAGTTATGAAAGCCCT
CGAAAAAACATACGATTCACAATTGAAACTTTCTGTAGCCTGTCCCACCC
CTACCACGGAGGATTTTTGCATTCTTTGGAAAAATCTTGCTGTGTGAGGC
AATTCAAGGTTTTTTATCTGCAAGAGCTTGGTAACGGCTAGTTATCAGGT
TACCTTTTGTTGAATACCTATGTCCCGTTACTTTACCAGCTGACTGCGGA
GAATGAAGTTTTGAACAACAAATACAACAAACTGAAGCGAAAATATAAAG
AATTGTACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGTGTTGAA
ATACATGAAGAATACAAAGGTCTACAGTAAGTATCTTCGTGATCGTTTAC
ACCAAGGTCACTTGAAATCAGTCACTTTAggaggcgggataaatttgaaa
acggggggggggggggtaagctCGGGATGTTCTACTCTGAACCTTGATAT
TGTCGACtcttattgggcttttccagaaaaaaaccgtatacccctgTTGA
GGCTGGTTGAAGAGGTCCATCCCTCtatggctggaaatgctgtaaccacc
tggaattccaggcaatttcaggcttaaagcccagtggaattctgaatttt
agtaggatttaaaaagctaccccatggaattccagccatttttgacagat
ttttatATCTCCCCTTGGAATTTCGCCActtatcaaaccttacccccttg
gaaaggTAATGGACCTCCTTAACAGGGGGTAtccagttttttttcttctg
gaaaagcccattagtGTAcgattaaaattgaaaatagacTAATAATAGAT
TTAAATTTTGACTTcgggaaaaataaatatatttctcGAGTATGTTTCGT
AGAAATGAGATGAGTGTACAGCATCAAGGCAAAAACAGGAAGAAAGTCCT
CCAACAACAGAAGACTATAGCTGACAAAACCAATCGAAACAAAGAAGATG
ATAATAACGCTGCAAAGTAAGGACCTCTTACCGACTCTTAATATTCCCTT
TGGAAAAAATTTACGGGTttaatagaggtttttcatgtttggGTAAATTA
CGTAATTCCCGCTATTACGGAAGCAAACGTTCACAAGTCGAATAAttgct
ttcataatggcggaattAACTTAACCAAATATTAAAATGTAACACACCGT
CTCTGCGTGCGATAGCGTGACGTCAGCCCGCTTTCCACCCATCCGAATAC
ATCGTCCAAACGCGTCAGAATTTTGGTAAAGTTCAACTTAAACTTACCAG
AGTAGAATCTTCAcactaaaatattttcttcttcaccCCAGTGAAGCTCA
AGAACATTCAGGTCATCCGCACTcgagtttaaaaaaatgtcCTACACCCC
GGTCATAAATGGTGCAAAGGAACAGCGGTGTTAAATCACCAGCAAGTTTT
TACACTCAAATAAGTACCagagatgtttcaaaaaaaagtgtataagtTTG
AATTAAGCttgtgagaaaactaaaaatgttattaaacCTCAACTTTTCAC
CatgagaaagaagaaagactaacttaaattttgagcaatCATATTTTAAA
TTCGCTTtatgaattcaaaatttatggAGAAAACTCGAAGCAATTCTCAt
ttttgaaacacccggtaAATCTGGTTATTTTGGAATAAAAAAGTCTATTC
AAAATTGCAGATTTCGTACCTTCTTTGTGTGCCCCAGATTTAATAACAAT
ATTTTTATGTCATTTTCTTTATAGATTGGTGACTCTATATGACAACTTAA
TGAAAAGATATGAAATCGAAGTAAAACTCAATCGAAATCAAACGAAAAAG
ATCAATAAGCTTgaggtataggtcttttttttcgattgattttttgctag
tgagtttttcacgaagcattataatcgttttttttataatttcgtAAACA
AAACGAAATTGTTCGGTgtcataaaaacaattttatttacCATCTGGCTC
TCCAATGCTTAATAGTTACAATCGCtttttttGCTcttaaatatattctt
tttatgatatagaaatGAGGCGCGCctcttatgctgacaaagcagaataa
ccaatagaatttttcaaaatgtttgctGGGGCGGTGCGGGAACTGGCGAA
AAAGGAAGGAAATAgttcctttttaaaaaaaatgatgtgTAAGCAAATGA
TAAGACATACGTTAAATGATGTCCTACTCTCCAAGTTGCCTGCCAGGATT
ATTTGTCATgcctcttttattttataggcTGAAAAGGAGAAATTGAAAGA
TGATATTTTCAAGAGAGAAGAAgagaatgtttttattcataaACAACTGA
AAGATCGAGACGAACAACTGAAAAGTATTTCATCTCTCAACAACAACACT
AAATCATCAAGACAAGGTATCATAACTTCGTGTATTGTCGACATACATTG
TCTGAATTCTTCATAGTAACTATCTGGTTTGCAAGTAGTtagagtgattt
ttttaaacagcttaaggcttggggacacgagaagtttttttcacgttggt
gcaatgcaacatgctccatcccaccaacacaagaaaaaagtgcatgtctc
atggtttctttctttatttcatgggacaaaaagtgagggaaacaCCCAAA
Agactagacgatgttatcgtccgttacagtgatagtagaggcgggaaaaa
tggcggtatggcgttatggcggtatacggaaaaaaatcggcgggagagtt
tcgaagaaacggacgataactcTTTGGCATAAAAAAGATTTGGCGGTTTT
GCTTGGACTAACCAGTGAGACTGGTTAGTCGATCCGTGGTGAAAACCGCC
TAAGTTTAAAGGCCGAGCTTGGTTCAAACGATCAAAAACACGCTGGTCAC
TGGGAAGAGACACAAGGACAAGATGGATCTAtggtttttctgtgaaaatc
cagctcattatggattttttcttcttggttcatttgttttattgagactA
CAAGATAACTTAGTTTAAGGGAGTACTTATTCCACAAGTATGCTTCTGTA
GaagctgttttaaaatgatttttcaacaagTCTACACACAGCAAAGTAAA
GAGACACAGAGAAACTAAGTAGGTAAGTCAGtttgtatatttcttatgaA
TCCTATGAATCACAGGCAGTGTTTCATTAGATATGTGAATACCCTCATAT
CTCCACTCTTAAAAGGTTATTTTCATCTTGTGTTAGCAGttctttgacaa
ctttgaaaaatgtcaaacaaagtACTTATTGTCAATTGTGGACTTTAAAA
GACTGCTTTTAACATACTTCTTGTTCGaaaactttcacattttctcattt
tgatttgaattgtcgAGAAGTTCAGTTACCTAGTCGTACCtgtaaaaata
atcagataattattctaaattttccaGGTAAGAATTAGAAATTCAGAAAT
TGAATGCATGGGAAAATATGGCAGTAATTTGCAGAGAGCACAATacagaa
atgaaatatttggcacagcaTCCTGGTTTATTATTGAGATTAAGACTTGC
AATATTTCACGACGTCCtggtataatttgagattataaattgcaatattt
cacttcacgtcctgtttaatttgggattataacttggtggaatatttcac
ttgacgttctggtacaatttgagattatgacttggaatatttcacttgac
gtcctggtacaatttgagattataacttggaatatttcacttcacgtcgt
ggtttaatttgggattataacttggaatatttcacttgacgttctggtat
aatttgagattatttcttggaatatttcacttcacgttgcggtttaattt
gggattataacttggaatatttcacttgacgttttggtacaatttgagat
tatgacttgcaatatttcacttcacgtcctggtttaatttgggattataa
cttggaatatttcacttgacgttctggtacaatttgagattatgagttgg
aatatttcaccaacgtttatttcacttgacgtcctgatataatttgagat
tatgacttggaaaaatTTACATCAGCCTTCTGGAATTAGTCGAGACTgta
atacacgttgtttttttataaggaaccttaactttgctctgagccttgag
ttccttatttttacagagaatttcagtctcacagttccttatcgagttcc
ttactacataggaaattttgaactttttgccccttgaaagatcaaaattt
ggtcaaattagtcccaataaggtacattatttttaaatccacttattctc
agcctgagcagttccttaacaattccttattttttgaaccattttcagcc
tcgagttccttataaacgtgttccttataaaaaaaaacatgtacagtaTT
GTCGGAAGACAGTTTAGAATCATTTGTTTATCATGATTGAATTACCTATT
TAtcagtttttgtaaataagaaatttaatgtcattTAAATCTGCCTCAAG
GTTTTTACCAAAATTGGTACTTTTCCATTTTAAGCTAATTTCTGGGggat
ttcttaacttttctcctatttcatcctcatttttaACGTCTCTTTTTGGG
tagaaagaaattcaagctcAAATCAAAGCAAGATCAACATACTGCAAAGC
TTTACAAGCTGgagcttttttactttttccctgcaaatttatcataagat
ttttcatccactactgtaaatttttttatcaaacaaaacaggaaagtcac
aaattcgaaattgcaagtatttataAAACTGTCAATGATTTGTATACATA
TCCTTTGGCAAATGGTGGTGGGTATATACTATAGCTTTTTATTTACATGG
ACTTTAATATATAAAAGGGGTAATTATGAGGATATAAtcgttttttaaga
aatttataaggtgaaagtttagatagatatccttgttgcaaagaaattac
aaacttattaaaaaaattactgtttataaaaattgttttctaagaaaaga
aagtgtagtttcaagaaaatataaaggGAATAAAAGGAAGAGGGTCTCCA
AAGAGAACTATAATATTTCTTGGAATCCCTCtttttttATCTCAGTTTCT
CTCCcgcctctttttttttgttttgattttttcgaataccGAACACAGCT
GGCCTCGCATACGGAAACTCGAATTCGTACGATTTGggatgtttttgtat
tttgtaccaaaatcgtatagtctaagattggcaactctaccgactgttaa
ctcttttcggcaaaaaaacccgtttgcgaattttcttcggctttgggctt
tttcttagatagtgattcgtcttagactataacatagtctaccaaaagac
acgctgattttgtccctgagACAATGgggcaaaattgattcgaatcaatt
ttgctccattgtcccagggacaaaaatgagaaaagcacaaatgttattaa
aagaaaaatggggtggagacacgcgaaagcgtttcaggttggtgggatgg
agcatgttgcattgcaccaatgcGAAAAAagcttctcgtgtccccaagcc
tttactcagaaaatgtttttttagttttttagaaacatttgaaaGACCAG
ATAGTTACGATGACGGATTTAGATAAGGTATTTTGGCTTTATTCAAAGGT
ACGGTACCCAGTAATGATATTGTTTTGTGCTCCAGGGAAAGAATTTTCAG
ACTGCGGGTGACTacgagactgttcatctaatatttccagaccatctaaa
aggaacgacaaataactattaaaaagcgacaaaaagaacgacaaacccta
accctgaccctaactatcaaagaacacGACATATTTCTCTATTTAAGAGT
GAGatggaaacattagatgaaccagaggaatgtaaagagatggaaaaaca
gctattctgattactcaaagttcaacgatcacttctattgaaaattctat
tgtaaaaacgttgattaggttattaaatgaaagtccagaaaagacggctc
gccagacctagtatatgacgagccgtttttccattgttttcaagaagctg
cttttccatctctttacattcctctggatGAACAAACTCTTACTACTGGA
TTTCTATACACAATTCACGGATGAATCTGAATGAATTGCTTTTTGATTTC
CTCTCATTTGTATGAAATACAGTAGTAAAATAAAAACTCTATTTTTCTTT
GAGATGTGGGGTCCTAAACTCGGCAAGAGagcattttttttcagttaggT
TCAGTGATGCTCGCgctttttttgataagaatgatgtttttcatttcatc
acggattttcttaactttaagaaaaaataatcctaaattttcatattctt
acggtattcctAGGTTAGAATCCaaattcaacctaaatttaAACATGTAA
TACATACCTGAAACATAAAATTGTAATTTTGTAAAGGTTTTGAATAAATG
GAAGGCTGGCAAATTCCATgacggatgttcttagcttattcttaaatttt
tgttcaatttattcatgaatattcttagagagcacattcttattaaaaaa
agcgtgtggAGCCGAGGCCACACTGAAATCCATGGAAACCATTCCCATTC
ACTTTTAGCTTTGGAAAACAAAATTCACGTGCTAACCAAAGACAGAGAAC
GATTAATGAAAGAAAATTCTAGATTGAAAGgtacatttttatttctttaa
tttaaccTGGATTGTTGGCAATTCAGGCACGAAGCACGGGATATGTTAGG
TATCTTCGTTCCCAAATTGCTATACTATAATATTTCGAAAACTTTCGTCG
TGTCGgtcattttaattttctttccctGGTACTTGGTAATGGCTCAGATT
TCTGTAACAGCTTTTGTAATATGGTGCTTTCACACTATTTTCATCTAAAA
GACGTTATcaggtactcttaggttccaaataaacggcccccccccccccg
cttgttaatttttcgaaaattttccaaccccaccggaccttattaggacc
cccccccgtttattaatctctaagaatattttcagctttcaaagagaagg
ccccttattttgctctaaatagcctgattttagcctatttttaccttatt
tttgggtttcagaagtacaatttccaacccccccggcaattaggtcctcc
ccgtttattaaaatctagaaaattttccaacccccctgtttattcgaacc
cccccgtttatttggaacctaagagtaattccTCGAGTGAATTCTCTCTT
AGAAAATACCCTAGGTAAATTTGCTTGACCTTCCAGGCATTCTCTCGGAT
GCCAAATGAACGTATAtcttgtttattaattttcatgtttttttatctaa
ttaATGATTGTTTCTTTCTAAATTATTCTTTAGAAGAGCTGCATGGTCTG
GACGCCGTAAGttgtttgattttattcaatttttttattcgaaTTGCGAC
GTTTCCCAATTCCTTTAATTAATTCCATTCTGCTTAGGCCATCTGCGTga
ttaaaagttcaaaaataaagaaagatttcaaattatCTAATGGCCAAGCT
TTTATaatcaaatttggtcaatttgaacTAAGGTGCTGAAACCATATCTG
AACCTCGAAAACCTGtttattttgcgatttttttagGTATGATGGGCTAA
AAACACCTGATCtttgggggtcttcaaattcaaaaaagacaTTAATCAAG
CGaaagagctcttcaaactaAGCAAAGAGTGGACTACAATAATTTTCCGA
CTTTTTTAGATCAGCAGAATTTATTGGTGTTTTtgtggtgaaaaaattaa
gggaaattaaagagtttttttaccaaaatctAAAAGATTGCGGGTTATCA
GTATATTGACATTTGAATTACAAaacagcaccctcaaattgattAAAATC
AATTGCTCAAAATCAACTGCAAAAGTTTGGTCACGGACAATTTAAAACGT
GAAACGACAAAGTGAACCGTTTTGAGAAGGCAGGCTTTATTTAGAAGCAT
ACAATGAAACAGGGGAAtactttatgaaaaaaatagagttttttgtaaat
ttcagAAGAAATATCTTTCGTCCCCAATTAAAGTGGCTAAATATAATCAG
CAGCggagacaaaatatttttttgatagaCGACGAATGAGGTAGTGTTTT
TGTGCTTGTTAGAAAGATATTACAGAGTGTGGAACATCAACAAAAGGGAA
ATCGAAGATGAAAAGTGAGGAAAATTATATTGGGACAGACTTTAACGGGG
CCCCTTTAACTTGAAGTCCCATTTTATCAGTACAACTTAAAGCAATAGTT
GATATGGTGTATATAAGAttgcaaaatgacaaaaaatttgattgTTGCTT
TTTCCTACTTATTTCCACAGGGTTTCTTCGAAGAATTAGAAGATATGAAA
TACGCATTGCATCAGTCCAATAAACTCAACCACCAATATGAACGAACTCT
AAAGAAATTGTGTAAACAGACAGGAATGAATTATAAACATTTGATGGCGG
CGTCAACCTCGGCACAGACGTCTGACggcaaaagaaaatcttcaacaCCA
ACAGCCACTTCATCAAGTGTCGGTCAATTATCCAACAGAAAATCGAGACA
ATCAAACCTACCAATATCCTAA Coding sequence (CDS) from alignment at sc0000031_pilon:214586..223607+ >XLOC_045217 ID=XLOC_045217|Name=XLOC_045217|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000031_pilon:214586..223607+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCAGTCGATGAC
AGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCAGTCGCTGACTGCGG
AGAATGAAGTTTTGAACAACAAATACAACAAACTGAAGCGAAAATATAAA
GAATTGTACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGTGTTGA
AATACATGAAGAATACAAAGGTCTACACTGACTGCGGAGAATGAAGTTTT
GAACAACAAATACAACAAACTGAAGCGAAAATATAAAGAATTGTACCAAG
AAATGTTAGAAGTGAAAGAAAAGTTGATTCGTGTTGAAATACATGAAGAA
TACAAAGGTCTACAAAATGAGATGAGTGTACAGCATCAAGGCAAAAACAG
GAAGAAAGTCCTCCAACAACAGAAGACTATAGCTGACAAAACCAATCGAA
ACAAAGAAGATGATAATAACGCTGCAAAAAATGAGATGAGTGTACAGCAT
CAAGGCAAAAACAGGAAGAAAGTCCTCCAACAACAGAAGACTATAGCTGA
CAAAACCAATCGAAACAAAGAAGATGATAATAACGCTGCAAAATTGGTGA
CTCTATATGACAACTTAATGAAAAGATATGAAATCGAAGTAAAACTCAAT
CGAAATCAAACGAAAAAGATCAATAAGCTTgagATTGGTGACTCTATATG
ACAACTTAATGAAAAGATATGAAATCGAAGTAAAACTCAATCGAAATCAA
ACGAAAAAGATCAATAAGCTTgaggcTGAAAAGGAGAAATTGAAAGATGA
TATTTTCAAGAGAGAAGAAgagaatgtttttattcataaACAACTGAAAG
ATCGAGACGAACAACTGAAAAGTATTTCATCTCTCAACAACAACACTAAA
TCATCAAGACAAGgcTGAAAAGGAGAAATTGAAAGATGATATTTTCAAGA
GAGAAGAAgagaatgtttttattcataaACAACTGAAAGATCGAGACGAA
CAACTGAAAAGTATTTCATCTCTCAACAACAACACTAAATCATCAAGACA
AGCTTTGGAAAACAAAATTCACGTGCTAACCAAAGACAGAGAACGATTAA
TGAAAGAAAATTCTAGATTGAAAGCTTTGGAAAACAAAATTCACGTGCTA
ACCAAAGACAGAGAACGATTAATGAAAGAAAATTCTAGATTGAAAGAAGA
GCTGCATGGTCTGGACGCCAAGAGCTGCATGGTCTGGACGCCGGTTTCTT
CGAAGAATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAAACTCA
ACCACCAATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAATG
AATTATAAACATTTGATGGCGGCGTCAACCTCGGCACAGACGTCTGACgg
caaaagaaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCAAT
TATCCAACAGAAAATCGAGACAATCAAACCTACCAATATCCTAAGGTTTC
TTCGAAGAATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAAACT
CAACCACCAATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAA
TGAATTATAAACATTTGATGGCGGCGTCAACCTCGGCACAGACGTCTGAC
ggcaaaagaaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCA
ATTATCCAACAGAAAATCGAGACAATCAAACCTACCAATATCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:214586..223607 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 622-873:8771 |
| Aaloc | 601-621:7786 |
| Aaloc | 529-597:7011 |
| Aaloc | 388-525:2678 |
| Aaloc | 298-387:2176 |
| Aaloc | 184-294:1304 |
| Aaloc | 46-180:640 |
| Aaloc | 1-45:1 |
|
