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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:197840..200198+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045214 ID=XLOC_045214|Name=XLOC_045214|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2359bp|location=Sequence derived from alignment at sc0000031_pilon:197840..200198+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTATGTGTCTTCTTTAAAATTCACATTTCTTTCCTCCCAAAGGTTGGT
GCCCATTCCTTTTACCAAACAAATCGAACAAttgaaaaaagacaaagaat
aTGAAATGGCTTTGGAATTATGTAAATTTCTGGATGATAAAGAACACAGT
CAAAAAATCATACCACATATCAAGAAGCTTCACGCTTTTGAGTTATTCTG
CTCAAAGAAATTTGAACAAGCCCTGAAGTTATTCAAGGAAATTGATGTTG
AACCGACCTATGTTATTGGCTTGTTCCCAGACCTCCTGCCAGAACAATAT
CGTAAACAGATTCAATATCCAGCTCAAGTACCCAAGATGACTTCTGGTGA
TTTACAAAGAGGTATTTCTTTTTTACCATAATGTAAAGACAAGTGTTTGT
ACTCCACATTTACGTCTTTTTATCAGGCTCCATACGTATGGACTCTTCCA
AGTTATTTAGAACCTAGCAATTTAGCAATTAGGCTTCGAACAGtcttaaa
aaggtttgaaatgTCTGGCATTTTTCCTGGCCCACAAGAAAAGATGGTTT
TCAATAAATATATAATAGTCTAGAATTGCCTGAGAATTCCACATAGCCTT
TGCCTTTgcggcagattttttttttgatttaataatttctgctttatttt
ttgtaggttttcATTGTCTAACGGAATTCCTCACACGTATACGAAATAAA
AGTTTATCTGAAGCTGTAAGTTTACTTCTTCTTTAttcattcaaaagttt
taaaGCATGTTTACCAGGGAGCATCCATTGTTGCTCAAGTCTTTTAGCTA
ACGTTTCTTGAAATCTACTCTTAATACATGAGGAGGAAGACTGGATTCGA
ATTCATCAGGTATGAGTGGCGTCAAAACGTTTGTCGATGCATTCAGATTC
CcatagaaaaataattttgccaatttcCTTGTGAATTCATTACCAACACC
TCAAAAGCCGACCGCACCGTTAAGGGTTTATACTGTATTGAGCCTGTCAT
ATAATAATGTCATTCTTTTAGAATAAAGGCACAAACGCAACGCCCACTTC
CGATCAGCCACGTAAAATGCTTTTACAAATTATTGATACATCTCTGTTGA
AATGCTACATGCAAACAAACGAAAACATGATTGCACCGTTATTGAGATTG
AAAGATAATCACTGTCATGTTGAAGAATGCGAGCGGGTCCTTGCTAAGGC
GAAGAAGGTCAACGAGTTGGTGTTGTTGTATCAGAGCAAAGGAAATCACA
AGAAAGCCTTAGATTTGCTATTACGGCAATCAGATATTCCTACAGGTCCA
TTGAGTGGTCCAAAGAAGACGGTGGACTATTTACAGCATCTTGGTGCAGA
CCATGTCCAACTTGTCATCGATTATTCAAAATGGGTTCTCAAGAAACATC
CAGAGGaagggttgaaaatttttactgcTGACACACCTGAGGTGGAGTCT
TTGCCACGTGATCGAGTGCTCTCCCACTTGGAAGCTATAACACCACAGTT
AGTGATCTCCTATCTTGAGCATATTATTAACGATTGGAAAGATAGTCATC
CTGAGTTCCATAATCGTTTGATTatcttttacaaagacaaaattCTCCCG
CTACTACGTGAGGAGCTTGTTGCTCCTAGCAACGATCCCGAAGGTGAGCT
GGCTACCTTTCGAACCAAACTTCTCTTCTTCCTGGAAACATCAACCAATT
ACCAGCCTTATAAATTATTAAGATTCTTCCCGCAAGATGTCTTATATGAG
GAGAGAGCTCTGTTGTTAGGTCGTTCCGGGCGCCACGAGGAAGCGTTAGC
GATATACATTTACGTGCTAAAGAACGACAAAATGGCGGAGAAGTACTGTA
GACGTCAGTACGAAATGAACGAGGAAGAGAACAGAAATGTATATTTAAGT
CTAGTCAAAATGTATTTGAATCCCCAAGAATTGCCATCACTTGGCTTGCC
ACAATCTACATTCACAGATGTCAAGTTAGAACCAAAAACCAAAGAAGCCT
TAGAGATCCTTAACAAGTATAATCAGAAAATTGATATTACACAAACATTG
GAGTTGTTACCTCAAACTACTGAAGTTAAGGATATCCGTATTTTCTTGAT
GCGTGTTTTGAAAGAGAAGATTCAACAACGTAGAAGTAGTATGGTTTTAA
AGAGTTTATTCTATAGAGACCATTTACAAGTACACGAGCAACGTATTTAT
TACCAGAGCACCAAATGTGTGATTACCGAGGAAAGAGCATGCCGGGTATG
TCATAAACGTATCGGAACTAGTGCGTTTGCCATGTATCCGAACGGTGTTA
TTGTTCATTACTATTGTTGTAAAGATCGCCGGATATGCCCGGTTGATCCG
GATGCCTAG Coding sequence (CDS) from alignment at sc0000031_pilon:197840..200198+ >XLOC_045214 ID=XLOC_045214|Name=XLOC_045214|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3516bp|location=Sequence derived from alignment at sc0000031_pilon:197840..200198+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTATGTGTCTTCTTTAAAATTCACATTTCTTTCCTCCCAAAGGTTGGT
GCCCATTCCTTTTACCAAACAAATCGAACAAttgaaaaaagacaaagaat
aTGAAATGGCTTTGGAATTATGTAAATTTCTGGATGATAAAGAACACAGT
CAAAAAATCATACCACATATCAAGAAGCTTCACGCTTTTGAGTTATTCTG
CTCAAAGAAATTTGAACAAGCCCTGAAGTTATTCAAGGAAATTGATGTTG
AACCGACCTATGTTATTGGCTTGTTCCCAGACCTCCTGCCAGAACAATAT
CGTAAACAGATTCAATATCCAGCTCAAGTACCCAAGATGACTTCTGGTGA
TTTACAAAGAGTTTTATGTGTCTTCTTTAAAATTCACATTTCTTTCCTCC
CAAAGGTTGGTGCCCATTCCTTTTACCAAACAAATCGAACAAttgaaaaa
agacaaagaataTGAAATGGCTTTGGAATTATGTAAATTTCTGGATGATA
AAGAACACAGTCAAAAAATCATACCACATATCAAGAAGCTTCACGCTTTT
GAGTTATTCTGCTCAAAGAAATTTGAACAAGCCCTGAAGTTATTCAAGGA
AATTGATGTTGAACCGACCTATGTTATTGGCTTGTTCCCAGACCTCCTGC
CAGAACAATATCGTAAACAGATTCAATATCCAGCTCAAGTACCCAAGATG
ACTTCTGGTGATTTACAAAGAGgttttcATTGTCTAACGGAATTCCTCAC
ACGTATACGAAATAAAAGTTTATCTGAAGCTgttttcATTGTCTAACGGA
ATTCCTCACACGTATACGAAATAAAAGTTTATCTGAAGCTAATAAAGGCA
CAAACGCAACGCCCACTTCCGATCAGCCACGTAAAATGCTTTTACAAATT
ATTGATACATCTCTGTTGAAATGCTACATGCAAACAAACGAAAACATGAT
TGCACCGTTATTGAGATTGAAAGATAATCACTGTCATGTTGAAGAATGCG
AGCGGGTCCTTGCTAAGGCGAAGAAGGTCAACGAGTTGGTGTTGTTGTAT
CAGAGCAAAGGAAATCACAAGAAAGCCTTAGATTTGCTATTACGGCAATC
AGATATTCCTACAGGTCCATTGAGTGGTCCAAAGAAGACGGTGGACTATT
TACAGCATCTTGGTGCAGACCATGTCCAACTTGTCATCGATTATTCAAAA
TGGGTTCTCAAGAAACATCCAGAGGaagggttgaaaatttttactgcTGA
CACACCTGAGGTGGAGTCTTTGCCACGTGATCGAGTGCTCTCCCACTTGG
AAGCTATAACACCACAGTTAGTGATCTCCTATCTTGAGCATATTATTAAC
GATTGGAAAGATAGTCATCCTGAGTTCCATAATCGTTTGATTatctttta
caaagacaaaattCTCCCGCTACTACGTGAGGAGCTTGTTGCTCCTAGCA
ACGATCCCGAAGGTGAGCTGGCTACCTTTCGAACCAAACTTCTCTTCTTC
CTGGAAACATCAACCAATTACCAGCCTTATAAATTATTAAGATTCTTCCC
GCAAGATGTCTTATATGAGGAGAGAGCTCTGTTGTTAGGTCGTTCCGGGC
GCCACGAGGAAGCGTTAGCGATATACATTTACGTGCTAAAGAACGACAAA
ATGGCGGAGAAGTACTGTAGACGTCAGTACGAAATGAACGAGGAAGAGAA
CAGAAATGTATATTTAAGTCTAGTCAAAATGTATTTGAATCCCCAAGAAT
TGCCATCACTTGGCTTGCCACAATCTACATTCACAGATGTCAAGTTAGAA
CCAAAAACCAAAGAAGCCTTAGAGATCCTTAACAAGTATAATCAGAAAAT
TGATATTACACAAACATTGGAGTTGTTACCTCAAACTACTGAAGTTAAGG
ATATCCGTATTTTCTTGATGCGTGTTTTGAAAGAGAAGATTCAACAACGT
AGAAGTAGTATGGTTTTAAAGAGTTTATTCTATAGAGACCATTTACAAGT
ACACGAGCAACGTATTTATTACCAGAGCACCAAATGTGTGATTACCGAGG
AAAGAGCATGCCGGGTATGTCATAAACGTATCGGAACTAGTGCGTTTGCC
ATGTATCCGAACGGTGTTATTGTTCATTACTATTGTTGTAAAGATCGCCG
GATATGCCCGGTTGATCCGGATGCCTAGAATAAAGGCACAAACGCAACGC
CCACTTCCGATCAGCCACGTAAAATGCTTTTACAAATTATTGATACATCT
CTGTTGAAATGCTACATGCAAACAAACGAAAACATGATTGCACCGTTATT
GAGATTGAAAGATAATCACTGTCATGTTGAAGAATGCGAGCGGGTCCTTG
CTAAGGCGAAGAAGGTCAACGAGTTGGTGTTGTTGTATCAGAGCAAAGGA
AATCACAAGAAAGCCTTAGATTTGCTATTACGGCAATCAGATATTCCTAC
AGGTCCATTGAGTGGTCCAAAGAAGACGGTGGACTATTTACAGCATCTTG
GTGCAGACCATGTCCAACTTGTCATCGATTATTCAAAATGGGTTCTCAAG
AAACATCCAGAGGaagggttgaaaatttttactgcTGACACACCTGAGGT
GGAGTCTTTGCCACGTGATCGAGTGCTCTCCCACTTGGAAGCTATAACAC
CACAGTTAGTGATCTCCTATCTTGAGCATATTATTAACGATTGGAAAGAT
AGTCATCCTGAGTTCCATAATCGTTTGATTatcttttacaaagacaaaat
tCTCCCGCTACTACGTGAGGAGCTTGTTGCTCCTAGCAACGATCCCGAAG
GTGAGCTGGCTACCTTTCGAACCAAACTTCTCTTCTTCCTGGAAACATCA
ACCAATTACCAGCCTTATAAATTATTAAGATTCTTCCCGCAAGATGTCTT
ATATGAGGAGAGAGCTCTGTTGTTAGGTCGTTCCGGGCGCCACGAGGAAG
CGTTAGCGATATACATTTACGTGCTAAAGAACGACAAAATGGCGGAGAAG
TACTGTAGACGTCAGTACGAAATGAACGAGGAAGAGAACAGAAATGTATA
TTTAAGTCTAGTCAAAATGTATTTGAATCCCCAAGAATTGCCATCACTTG
GCTTGCCACAATCTACATTCACAGATGTCAAGTTAGAACCAAAAACCAAA
GAAGCCTTAGAGATCCTTAACAAGTATAATCAGAAAATTGATATTACACA
AACATTGGAGTTGTTACCTCAAACTACTGAAGTTAAGGATATCCGTATTT
TCTTGATGCGTGTTTTGAAAGAGAAGATTCAACAACGTAGAAGTAGTATG
GTTTTAAAGAGTTTATTCTATAGAGACCATTTACAAGTACACGAGCAACG
TATTTATTACCAGAGCACCAAATGTGTGATTACCGAGGAAAGAGCATGCC
GGGTATGTCATAAACGTATCGGAACTAGTGCGTTTGCCATGTATCCGAAC
GGTGTTATTGTTCATTACTATTGTTGTAAAGATCGCCGGATATGCCCGGT
TGATCCGGATGCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:197840..200198 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 421-1758:1022 |
| Aaloc | 364-420:659 |
| Aaloc | 1-360:1 |
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