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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1871471..1875358- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045176 ID=XLOC_045176|Name=XLOC_045176|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3888bp|location=Sequence derived from alignment at sc0000043_pilon:1871471..1875358- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGCACGATTCAGCGTCTACGCCTTGATTGTTTTGAGAGTACTTGA
AGGCATTGCTTTGGTAAGTATCTTTTTAAATTCAGCAAAACATGAAATTG
ATCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTTTGGGATT
GTTTTGGGAGTATTACAATAGAATTCCCTCGAGGAATTCCTAAGAGATTT
CTATTGTAATACTCCCGAAACAATCCCACAATGCATCGCATTTTTTAGAA
AAATCAAAAACTCCGATAAGATCTATTTACAAGGATCGAATCTTATTTGT
ACTAATCTTTGCAAGAAGAAATTTGGCTGAATTTCAAGTTTCCACCAAGT
TACATTTTTTGTCATCTACCATGTTTGCCTCAAATGTTTTTCTTACAACG
ATTAATTAGTATTACAATTTTAAATTTAATACCTGCCTTTTGTTTGTTGA
AAATAAATTAAGCTTTCGTATGTTTTTTGGTAAAATTCATGTTTTGTAAA
CTTCTATTGATTTTAGGGTGTCCTTTTCCCAAGTAACCACGCTATTTGGG
GTCAATGGGCTCCGCCTTTGGAAAGATCTCGTTTGTTTTCAATCACAGCT
GCAGGATGTCCCGTGGGCACCATTTTGACTATGCCTATGACAGGTCTGTT
GACCAAATATGGATTTGATGGTGGCTGGGCTTCCGTATTCTACGTTTTTG
GTAAGTTCGTCAATACCAAATGCAAAACCACGTCCATGCAACGTTTTTTT
GATGGATGAGCACTGCATCGAGGTTCAATACCGAATTTTTGAGACTTTAC
AAATTATAAAAACACTCAGCTTTTGCGTTTCACAAAAGTAATCTTTAAGA
TTTTCACACTTAACTTGAGGACTTTGAATAAAAAGTAATGATAATAAAGA
AGTAAATCCCTGATTTAACATTCACGTTAGAGCCGTAGTTATGGTACTAA
CGCTTTTTATTTCTACAATTCATTTCGAAATGCTTATAAACTTTCACGTT
CTTTCTAGGTGCTGTTGGTCTGTTGTGGTCATTTGTGTGGTGGCTGGTCA
TTCATCCAGCCCCTGAGACACATCCTACCATCTCACAGGCTGAAAAGAAC
TATATCATGGCTAGCTTGTCTAATAGAAAAGGCGAAAAGGTTAGTCAAGA
CACAAATCTAAATATTGCATAGCATGTTTTAAACAACGAGTTATGAGTCA
GTGTGAGAGGGAGCTAAGATTGGTTAAGAATTAGCTTAAAGACAGGCGGT
CATCTCCCATCTCATAAGCTGAAAATAACTTTATTATGGCTAGCGCTGCG
TGAATTCTCCTGAGCTCTTACGGTCGGAGTTGGTCTTAATAAAATCGAGT
ATCTGTGTTTTCTAGCCATGTTCCCAATATTTTTCAACTTTTGTATACTA
CTTTACATATTCCTATACTTTGCATATTCAAATTCTCGAGAGGAAGTATG
CAAAACAGCTTGAATTACAGTATTTAATCGATTTAGATGAAGCAAAGCAT
AACCATTGGATATCGAAATTTTTAATGCCTTTCATGGGCTTACTAGTTAC
ACACGATTATTATCATTTTAGGCACCACCAGTACCTTGGTTAAAGATTAT
AACTTCAATTCCTGTTTGGGCCACTATTGTTGCAAACTTCACAGCTGATT
GGGGTTTATATACAATCCTTATTTGTATCCCGAAATTCTTCCAAAAGGTT
TTGAACTTCGATATCGCAACGGTAAGAAAATAAGACTCAAGGGACTCTCG
CTAATTCAAGCTTCATATATGTGAATCGCAACCTCGTTCCCTCCTGCGTA
TTATCAGCTTTTTGATGCTTACTGATAGCGCTAGATAATACCCTAGCGTT
AATCAGTAACGTAAATAAAGCCTGGGATATACGGGGACGCGGGGGTGTGA
ATCTTTACAAGTCGAAATAATTCTCAGTGACCGCAATTCGAATTTCTCTG
TAATTCGAAAATGATCATTTCACTATTTCAAACAAATTGAGTTTCCCAGA
CCCTGTGAGATTAAACTCGTCAGGCGAAACCGGCAATTTAAATCCAATCA
ACCTAGAAATAATATTTGATATTTGCCAAATTCTACAGCGCTGAAAATAA
AATCCTGAAAAATATAACTGAAAATTCATCTTACCCACTAGACTGGTTTC
TTGGTTTCTTTGCCATACTTGATCAAAGCAATCGTTGGTCCATCCGGTGG
TATTATTGCGGATATGATGATCATGAATGGGTTTAGTGTCAAGAACACAC
GTCGTCTCATCTTCACTATTGGTATGTTGGAAGTGATTTTCTGATTCCTC
CATTCTTTGATGTCTTTATATCTTATTTTTAATTCTATGTTTCGCTAAAA
TGACAATGAAAGTGATTTTCTAAACTGTTTTTTTATTTCCCCTGTGTTTC
CCCCAAAGGATTAATGGTCTTTTGAAAATTTTCATACCAATTTCGAGACC
AATTTACTCCTTTTAGGTTGTTTTTTATATTTTTTTTACTAAAATAAAAG
CATACAAAAATAAATTTAAATTGGCGAAAAGAATCCAGAGAATTGAGGAC
CAAGGATTATCACCACGAAATACCAGATAAATAGAGAAAACTATCCATAA
CTTTTTGGTACATTGAATTTCAAATAAATTACCTGAATGACCAAATTTAA
CGACGATACAAGAGCTAAAATAGACAACGAACGGTTTCCCTACACCATTC
AATTTAACTTTATTTAACATCTTCTTTTTCCTCCAGGATGTACAACAGCC
AGTATCTTTATCGTCGGTGTTGGTTACGCTAAAAGCAAAGCGGTTGCTAT
CGGTTTGTTATGTACAGGTGTAGGTATTACCGGTCTGAATGCTACGGGTT
ATGCAGTCAACATCCTGGATATAGCACCTCGATTTGCTGGTGTAATTATT
GGGTTCAGTAATGTTTTTGGATCAATGCCTGGATTCATTAGTCCAATGAT
TGTGGGTTACATCACCACCAAAAATGTAAGTGAATCCGGTTGGTAAATCT
ATTGAAGTCTGAGTCTAACATCTGAATAACGTTCAAATAACGTTCGATGA
TTGTTCAAGCGATTTTAATTCCAGGCAGGAAAATTCAAAGTAGAAATATA
GCAGATAGAGGACTTAAAAAAACACTGATGTCTTAAAAAATGAAGGTAAT
GGAGACGTAGAGAGAAACATATATTCAGATCAAGGAAAGGTCCAGTGGCA
AAAAGTCGGATAGAATGGTTTGAGCACTGAGCTGAAAAGGACAAGAAAAT
ATGTTCAAATTGTGGAGAGTTTAAGCTAATTTGATCATGCGAGTTTCAGA
GGGTTTTAGAAAGGAAAAAATGCAAATTATGAAGAAAAAAAACTTCATGT
GAGATGATGCATGATTTTATGGTAAGAACATTCTAGTAATCAATTCTTTT
TTCTTCAGACTGCTGCTGAATGGCAATTGGTATTCTGGATTACCGCTTTC
GTTTATGCCTTTGGTGTTGTCTTCTTTGCGCTAACTGTGTCTGGTGACAG
ACAACCATGGAACGATCCTGAGGGAGAAGGAAAAAATTCGGACACCATCG
AGTCCGGTGATGAACCAGCCCGGTCCATTAGCCCGGACCCAACTTCCGAC
GCTAAATTAACTGATGTTCGAAAATTATCTTCGCCGGGCACCGAGGATAA
GAAAACAGAACCTACAAAACAGTCACCTCAAGCTGATAAGAAGTCTGGTT
CATCGAGTCCGAAAGACGGCTCATCGAGCCCGAAAGAAGATGCTAAGAAT
GATGGGGCATCAAGTCCTAAAGAAGGTTCGGCGAGTCCAAAAGATGGTTC
AGCGAGTCCAAAAGATGGGTCAACGAGTCCAAAAGACGGGTCAACGAGTC
CAAAAGAAGAAACATCGGCTCAACCAGAAGATGAAACG Coding sequence (CDS) from alignment at sc0000043_pilon:1871471..1875358- >XLOC_045176 ID=XLOC_045176|Name=XLOC_045176|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2754bp|location=Sequence derived from alignment at sc0000043_pilon:1871471..1875358- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGCACGATTCAGCGTCTACGCCTTGATTGTTTTGAGAGTACTTGA
AGGCATTGCTTTGATGGCCGCACGATTCAGCGTCTACGCCTTGATTGTTT
TGAGAGTACTTGAAGGCATTGCTTTGGGTGTCCTTTTCCCAAGTAACCAC
GCTATTTGGGGTCAATGGGCTCCGCCTTTGGAAAGATCTCGTTTGTTTTC
AATCACAGCTGCAGGATGTCCCGTGGGCACCATTTTGACTATGCCTATGA
CAGGTCTGTTGACCAAATATGGATTTGATGGTGGCTGGGCTTCCGTATTC
TACGTTTTTGGGTGTCCTTTTCCCAAGTAACCACGCTATTTGGGGTCAAT
GGGCTCCGCCTTTGGAAAGATCTCGTTTGTTTTCAATCACAGCTGCAGGA
TGTCCCGTGGGCACCATTTTGACTATGCCTATGACAGGTCTGTTGACCAA
ATATGGATTTGATGGTGGCTGGGCTTCCGTATTCTACGTTTTTGGTGCTG
TTGGTCTGTTGTGGTCATTTGTGTGGTGGCTGGTCATTCATCCAGCCCCT
GAGACACATCCTACCATCTCACAGGCTGAAAAGAACTATATCATGGCTAG
CTTGTCTAATAGAAAAGGCGAAAAGGTGCTGTTGGTCTGTTGTGGTCATT
TGTGTGGTGGCTGGTCATTCATCCAGCCCCTGAGACACATCCTACCATCT
CACAGGCTGAAAAGAACTATATCATGGCTAGCTTGTCTAATAGAAAAGGC
GAAAAGGCACCACCAGTACCTTGGTTAAAGATTATAACTTCAATTCCTGT
TTGGGCCACTATTGTTGCAAACTTCACAGCTGATTGGGGTTTATATACAA
TCCTTATTTGTATCCCGAAATTCTTCCAAAAGGTTTTGAACTTCGATATC
GCAACGGCACCACCAGTACCTTGGTTAAAGATTATAACTTCAATTCCTGT
TTGGGCCACTATTGTTGCAAACTTCACAGCTGATTGGGGTTTATATACAA
TCCTTATTTGTATCCCGAAATTCTTCCAAAAGGTTTTGAACTTCGATATC
GCAACGACTGGTTTCTTGGTTTCTTTGCCATACTTGATCAAAGCAATCGT
TGGTCCATCCGGTGGTATTATTGCGGATATGATGATCATGAATGGGTTTA
GTGTCAAGAACACACGTCGTCTCATCTTCACTATTGACTGGTTTCTTGGT
TTCTTTGCCATACTTGATCAAAGCAATCGTTGGTCCATCCGGTGGTATTA
TTGCGGATATGATGATCATGAATGGGTTTAGTGTCAAGAACACACGTCGT
CTCATCTTCACTATTGGATGTACAACAGCCAGTATCTTTATCGTCGGTGT
TGGTTACGCTAAAAGCAAAGCGGTTGCTATCGGTTTGTTATGTACAGGTG
TAGGTATTACCGGTCTGAATGCTACGGGTTATGCAGTCAACATCCTGGAT
ATAGCACCTCGATTTGCTGGTGTAATTATTGGGTTCAGTAATGTTTTTGG
ATCAATGCCTGGATTCATTAGTCCAATGATTGTGGGTTACATCACCACCA
AAAATGATGTACAACAGCCAGTATCTTTATCGTCGGTGTTGGTTACGCTA
AAAGCAAAGCGGTTGCTATCGGTTTGTTATGTACAGGTGTAGGTATTACC
GGTCTGAATGCTACGGGTTATGCAGTCAACATCCTGGATATAGCACCTCG
ATTTGCTGGTGTAATTATTGGGTTCAGTAATGTTTTTGGATCAATGCCTG
GATTCATTAGTCCAATGATTGTGGGTTACATCACCACCAAAAATACTGCT
GCTGAATGGCAATTGGTATTCTGGATTACCGCTTTCGTTTATGCCTTTGG
TGTTGTCTTCTTTGCGCTAACTGTGTCTGGTGACAGACAACCATGGAACG
ATCCTGAGGGAGAAGGAAAAAATTCGGACACCATCGAGTCCGGTGATGAA
CCAGCCCGGTCCATTAGCCCGGACCCAACTTCCGACGCTAAATTAACTGA
TGTTCGAAAATTATCTTCGCCGGGCACCGAGGATAAGAAAACAGAACCTA
CAAAACAGTCACCTCAAGCTGATAAGAAGTCTGGTTCATCGAGTCCGAAA
GACGGCTCATCGAGCCCGAAAGAAGATGCTAAGAATGATGGGGCATCAAG
TCCTAAAGAAGGTTCGGCGAGTCCAAAAGATGGTTCAGCGAGTCCAAAAG
ATGGGTCAACGAGTCCAAAAGACGGGTCAACGAGTCCAAAAGAAGAAACA
TCGGCTCAACCAGAAGATGAAACGACTGCTGCTGAATGGCAATTGGTATT
CTGGATTACCGCTTTCGTTTATGCCTTTGGTGTTGTCTTCTTTGCGCTAA
CTGTGTCTGGTGACAGACAACCATGGAACGATCCTGAGGGAGAAGGAAAA
AATTCGGACACCATCGAGTCCGGTGATGAACCAGCCCGGTCCATTAGCCC
GGACCCAACTTCCGACGCTAAATTAACTGATGTTCGAAAATTATCTTCGC
CGGGCACCGAGGATAAGAAAACAGAACCTACAAAACAGTCACCTCAAGCT
GATAAGAAGTCTGGTTCATCGAGTCCGAAAGACGGCTCATCGAGCCCGAA
AGAAGATGCTAAGAATGATGGGGCATCAAGTCCTAAAGAAGGTTCGGCGA
GTCCAAAAGATGGTTCAGCGAGTCCAAAAGATGGGTCAACGAGTCCAAAA
GACGGGTCAACGAGTCCAAAAGAAGAAACATCGGCTCAACCAGAAGATGA
AACG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1871471..1875358 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1306-1401:97 |
| Aaloc | 1243-1290:145 |
| Aaloc | 1174-1230:202 |
| Aaloc | 1054-1170:319 |
| Aaloc | 898-1053:481 |
| Aaloc | 661-897:1151 |
| Aaloc | 529-657:1748 |
| Aaloc | 379-528:2318 |
| Aaloc | 250-378:2879 |
| Aaloc | 64-246:3373 |
| Aaloc | 1-63:3889 |
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