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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000181_pilon:8367..11907+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045139 ID=XLOC_045139|Name=XLOC_045139|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3541bp|location=Sequence derived from alignment at sc0000181_pilon:8367..11907+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCTGTATTTAGTGGCAGGGATTGTTCTCGTGACAATATGTAAGTT
ATCTATATCTTATTAACTTAACCTTGCCTCActcatttttaaatgtttat
tatCAAGCTTTTTGGGATTTGTATTATCGTTATCTGCCAGGCTACGtgat
ttttatctattttttttggCCTCATCACAAAGTTTTGTATTTACCACTGA
TCAgttaaaatagcaattaaagttgaacaatttttccaaagactgtaatt
ctgttttgattttcaaaaagccATGTGAATcaatttatcataatttttaa
tTGCTGCTTATAACATAGCAAAGAATTGACTGATAAAAGCTATGATGATT
TTAAAAGGACGTAGAAATTTGGTTCTCAAAGCTTAACAAgcagaattcta
aaaatttttagaaCTATTGTGACTAAGTTGTAACCAACTAAAATTTACGG
AGTTAGAATTTGTAGATAATCTTTTAACCTGAtgcaatttcttcttttag
tAATAGTGTTGCTTTTGATTCGATCAAGTAAATCTGGTGATAGCGTCATT
CTTTTGGGCTTATGTGATTCTGGTAAAACTTCATTATTTGGACAGGTAAG
TTTGTTGATATTCTTTTAGTTTCATAATAATTTAAGAAACATTAGCATAT
AACAGGTAGCTCTGAAATCTAAGAAATATTGATAATGTGATCTAAGTCTG
CTTGCAATAAGTGTTCACTCTTATGGGTCTTTTCGTGGAAACAATGTCAT
TTTACAACTCGCTGATTTTTCAGCTTACCACCGGAAAAGAATTGAAGACC
CAAACTTCCATTattgaaaacaaaggaaagatCAGTACAACTGCCACAAA
GGTACTCTAACCCCCtcgtatattttttaaaaagcttttttcttgTGTGT
AATAGGTGCTTAGCTATGACATATTTGGTGGCGTATATAACAAGATATCG
AGCATTTTAAGGTGTCTATGAAATTCCATATTGATGTAAGATTCAAAATC
AATTCTTATCAATCTACTATTTCGTGTactcatgatatgcaccactgcaa
tgactccactaaattatgcaacttttctgttgttttttgttccacccaac
acgtcactttttctattgtttaagtgacgcaTTGGGCTGAAAAGcttaaa
agttttcagaagactctccagtggtgcatatcatgaatatatcgAGAAAA
AAGGAACTAATTTACAATTGTTGGTGCAGTCTTCAGACAATGTAGATCTT
TGTTGTATTTATTTCACTGTACAAAAAGCTATTTTTTACCTCTTCTTTTC
TTCTGATAGAACGGTAAACCGTGGAAATTGATTGACATTCCAGGCCATGA
AAGAGTTCGAGATAAATATTTCTACAACAACAAAGACAATGCAAGGTAAA
TTCACAGTAGTTTGATAACAAAGTAGTTATCCTTGCTGCTATCTctatgt
ttttaattttgttacGATTACTGACACTCTTGTATCCCCTTCCTTAGCAT
TGAAAATAGCGAATTTATGTAAAATAAAGACTTTCGCATAAGGGTATTAA
CTCAGGCACGGGAATTTTGTTTAATGTAGTTTTTAAGAATATGGAAATAA
CTTAAGTTATTTGAAACAAGTGCGTTTTATTTTTAGAGGTATTCTTTTCC
TGATTGACAGTGTCAATTTCCCTCGAGAAATTCGTGATGTGGCAGAGTAA
GTcttgttttataaaaatttattaagaTTAAGTCTGTTTGCTGTGAAACA
CGTTTCCCTTAGCTTCGCCATTCAAAGTGCTTGAACAGGAGAATATTTTA
TATGGATCTTCCAAACTGTAATTTCAACTCCGTCCAGTAATAAAAAGCCG
TTCAACTGAAAATCTTCAACCCTGGTTTATTTTACACTTCTTTGATCAGA
CAATATTAGGTCCCTAAATGGAGATGTTAGCGTAACAAAAGTGTCAtcgt
gtactcttaggttccaaataaacgggggggttcgaataaacggggggggg
ttgggaaattttctagatcttaataaacgggggggacctaattgccgggg
gggttggaaattgtactcctgaaacccaaaaataaggtaaaaataggcta
aaatcaggctatttagagcaaaataaggggccttctctttgacagctgaa
aatattcttagagattaataaacgggggggtcctaataaggtccgggggg
gttggaaaattttcgaaaaattaacaagcgggggggcccgtttatttgga
acctaagagtactcactgttcttttcaatttcacaGATGCATGTATGACT
TGTTAGCTAACCGCACAATGCAAAGAAACAAAGTCTCTGTCATGGTCGCC
TGCAACAAACAAGGTATTGCATTCAAATCCTCTGATGATTATATTTTCCA
ATATgttgaaattattgaaattaataATTAGTATTATGTATTAGTGATAT
AATTAGAAGTGTCTGACTTCTAACGATATACCAATTCAAATTACAGATAT
TCCCACCGCGAAATCACACAACGTTATCAAAAGCCAATTGGAAAAAGAAT
TGTaagttttatcttatcttagcTTCTAAAGTTTTCTATCTCTGCTTACC
AAGCTAACAATCAAAAGTATGCCACAAAGTTTACAACTTTATTTTCGTAA
AGATAAATCTCTCATTAATCTTGAAAAAACGAAATCTATGTATTTCCTTA
AAGTTCTTGCATCGGAGGTAACCTCTATAAGGTAAGTCTCTATAAGGTAG
CCCGTTTCAGTCGAAAAACACCGtttttttCACTCAAACAGGCAACCCTC
TAAGACTTGTAACTTTAAATTCATGTGAAAAACCATGGTTTATCTGAAAT
GAGTTTCTAGCACTAAAGGataaaaagtgcatttttcatcttctttttct
aaaattttttagaataacttattccaaaaaattataGTGCTATGagcaca
gatctgtaaagcccgaaactttaagctttctccagcaaaaaaaagtgaag
cgaaaattgaactttttaaatttcgtgccgatggataggatctagcattt
taaaattgtttttggagcgcgagataaaaaaagtagtgatttctttggta
gggaaacctaccaaaacttgcttcacttttcgataaaaggcCGCGGATCT
AGGCTATgagttatcttttcaacggcGTATGATTTGTTGTATTTGAGACA
TTCGTtgaaaaaatgcaagaaaacaagcactacttacttacttaaaagtg
aatggacttttaaaatctataaaatcGGGTGATGAAAGTCGATCTTAACA
TTCCCCTctcattattttcaatttcagaaACAAACTTCGGCAAACTCGTT
CGGCAGCTTTACTTGGAATTGACGATTATTCATCCAGTAGAAATGCTTTC
ATCGGTAAGCAAGGGAAAGACTTTGAATTCTCGCATGTCAATCCAATCAA
AGTTGAGTTTTGCGAATGTAATTTGAAGAACACACAAGTTGAGGGAGAAG
TAAAAGTCGATGGCGTTCGTACTTGGCTTGAAAAATTGTAG Coding sequence (CDS) from alignment at sc0000181_pilon:8367..11907+ >XLOC_045139 ID=XLOC_045139|Name=XLOC_045139|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1416bp|location=Sequence derived from alignment at sc0000181_pilon:8367..11907+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCTGTATTTAGTGGCAGGGATTGTTCTCGTGACAATATATGGAGC
TGTATTTAGTGGCAGGGATTGTTCTCGTGACAATATtAATAGTGTTGCTT
TTGATTCGATCAAGTAAATCTGGTGATAGCGTCATTCTTTTGGGCTTATG
TGATTCTGGTAAAACTTCATTATTTGGACAGtAATAGTGTTGCTTTTGAT
TCGATCAAGTAAATCTGGTGATAGCGTCATTCTTTTGGGCTTATGTGATT
CTGGTAAAACTTCATTATTTGGACAGCTTACCACCGGAAAAGAATTGAAG
ACCCAAACTTCCATTattgaaaacaaaggaaagatCAGTACAACTGCCAC
AAAGCTTACCACCGGAAAAGAATTGAAGACCCAAACTTCCATTattgaaa
acaaaggaaagatCAGTACAACTGCCACAAAGAACGGTAAACCGTGGAAA
TTGATTGACATTCCAGGCCATGAAAGAGTTCGAGATAAATATTTCTACAA
CAACAAAGACAATGCAAGAACGGTAAACCGTGGAAATTGATTGACATTCC
AGGCCATGAAAGAGTTCGAGATAAATATTTCTACAACAACAAAGACAATG
CAAGAGGTATTCTTTTCCTGATTGACAGTGTCAATTTCCCTCGAGAAATT
CGTGATGTGGCAGAAGGTATTCTTTTCCTGATTGACAGTGTCAATTTCCC
TCGAGAAATTCGTGATGTGGCAGAATGCATGTATGACTTGTTAGCTAACC
GCACAATGCAAAGAAACAAAGTCTCTGTCATGGTCGCCTGCAACAAACAA
GATGCATGTATGACTTGTTAGCTAACCGCACAATGCAAAGAAACAAAGTC
TCTGTCATGGTCGCCTGCAACAAACAAGATATTCCCACCGCGAAATCACA
CAACGTTATCAAAAGCCAATTGGAAAAAGAATTATATTCCCACCGCGAAA
TCACACAACGTTATCAAAAGCCAATTGGAAAAAGAATTaaACAAACTTCG
GCAAACTCGTTCGGCAGCTTTACTTGGAATTGACGATTATTCATCCAGTA
GAAATGCTTTCATCGGTAAGCAAGGGAAAGACTTTGAATTCTCGCATGTC
AATCCAATCAAAGTTGAGTTTTGCGAATGTAATTTGAAGAACACACAAGT
TGAGGGAGAAGTAAAAGTCGATGGCGTTCGTACTTGGCTTGAAAAATTGT
AGaaACAAACTTCGGCAAACTCGTTCGGCAGCTTTACTTGGAATTGACGA
TTATTCATCCAGTAGAAATGCTTTCATCGGTAAGCAAGGGAAAGACTTTG
AATTCTCGCATGTCAATCCAATCAAAGTTGAGTTTTGCGAATGTAATTTG
AAGAACACACAAGTTGAGGGAGAAGTAAAAGTCGATGGCGTTCGTACTTG
GCTTGAAAAATTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000181_pilon | genome | sc0000181_pilon:8367..11907 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 496-708:3329 |
| Aaloc | 442-492:2499 |
| Aaloc | 364-438:2288 |
| Aaloc | 304-360:1638 |
| Aaloc | 217-300:1310 |
| Aaloc | 139-216:774 |
| Aaloc | 46-138:503 |
| Aaloc | 1-42:1 |
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