XLOC_045135 (mRNA) -

Overview
NameXLOC_045135
Unique NameXLOC_045135
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000156_pilon:169940..170814+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045135 ID=XLOC_045135|Name=XLOC_045135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=875bp|location=Sequence derived from alignment at sc0000156_pilon:169940..170814+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAagatttggaaaactttgctGCTTTTGGCACTTTGTGTCTATGCAGT GCATTGTAAGTTTTACAATTTATTTCACCTTCCAAATCGAATCTTTGTAA CTTGTCGTTAACAGGCCAGATACTATTTCAAGGcgaaaagaataaatttc ttACCAATTTCTATGTTCAGGTACGGAAGAGAGCGAACAACAAGACAAAG TTCTCGAcgatcaacaacaacaagatgAAGAAGACGACCAATCGCAAgac atgatgacgtcatcgcaaGATGAAGAAGATATCGTGGAGCAAGATGAAAG CTCATTGGACGAAGtcaaagatgaagaaggtatgTTGCAAATCCTATAAT CCATTGGATGGAtttttttGCTCCGTTTCATCTTTATTCTATTTTACCTG GTTTCTAGGCATCTTTACATGTTCACTTGCTTTCTCTACTTAGATGAGAC TTAGATTACAGCTTGTGGATCCGCTTGACCTTTGTCTTCTATAGAATCTG AATCTTACATCGTTCTTCTTTCTTGGAAGTGATTAGAAATGATCTTTTTA CTGATCGGTGTCCACCACAAGTTTTTCGAGAGAATCAtttttttGATTAT TGTGAGATCCGACTTCAACAATTTGTTGAAATTATTTCAACACAGCAGAC CTGAACGATCCGAAACCGTTGCTATGGTGGCGACGTCGCCGACGAAGACA TCGAAGACGACACGGTTTCCGAAGACGATTTGGTTTCCGAAGACGATTTG GTTTCCGAAGACGTCGCCCTTATTACCCGGGTGGATATCCATACGGAGGT GGTTACCCATACGGCAGATACCCTCACGGACCTGGCGGACGTCCATACCC TCACAACAAACGCTATGGAAAATAA

Coding sequence (CDS) from alignment at sc0000156_pilon:169940..170814+

>XLOC_045135 ID=XLOC_045135|Name=XLOC_045135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000156_pilon:169940..170814+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAagatttggaaaactttgctGCTTTTGGCACTTTGTGTCTATGCAGT
GCATTATGAagatttggaaaactttgctGCTTTTGGCACTTTGTGTCTAT
GCAGTGCATTGTACGGAAGAGAGCGAACAACAAGACAAAGTTCTCGAcga
tcaacaacaacaagatgAAGAAGACGACCAATCGCAAgacatgatgacgt
catcgcaaGATGAAGAAGATATCGTGGAGCAAGATGAAAGCTCATTGGAC
GAAGtcaaagatgaagaagGTACGGAAGAGAGCGAACAACAAGACAAAGT
TCTCGAcgatcaacaacaacaagatgAAGAAGACGACCAATCGCAAgaca
tgatgacgtcatcgcaaGATGAAGAAGATATCGTGGAGCAAGATGAAAGC
TCATTGGACGAAGtcaaagatgaagaagCAGACCTGAACGATCCGAAACC
GTTGCTATGGTGGCGACGTCGCCGACGAAGACATCGAAGACGACACGGTT
TCCGAAGACGATTTGGTTTCCGAAGACGATTTGGTTTCCGAAGACGTCGC
CCTTATTACCCGGGTGGATATCCATACGGAGGTGGTTACCCATACGGCAG
ATACCCTCACGGACCTGGCGGACGTCCATACCCTCACAACAAACGCTATG
GAAAATAACAGACCTGAACGATCCGAAACCGTTGCTATGGTGGCGACGTC
GCCGACGAAGACATCGAAGACGACACGGTTTCCGAAGACGATTTGGTTTC
CGAAGACGATTTGGTTTCCGAAGACGTCGCCCTTATTACCCGGGTGGATA
TCCATACGGAGGTGGTTACCCATACGGCAGATACCCTCACGGACCTGGCG
GACGTCCATACCCTCACAACAAACGCTATGGAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_045135XLOC_045135-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156_pilongenomesc0000156_pilon:169940..170814 +
Properties
Property NameValue
Aaloc217-444:648
Aaloc58-213:173
Aaloc1-54:1