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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000302_pilon:230633..234049+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045131 ID=XLOC_045131|Name=XLOC_045131|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3417bp|location=Sequence derived from alignment at sc0000302_pilon:230633..234049+ (Clytia hemisphaerica_ch_hm2_pilon)
aaattaaaaaaaatttattttgctgTCCTTACTGCGAtttttttGCTCTT
GCTTTGCAGAAGAAACAACGTTGAAAATAAGATCTTGGAGGTTGAAAAGA
TGGtaaacttatttctttaaaattgtttGATCCAACTTCCAAAAGAAAAC
CCAGAAAGAACGGGTACGGGGAATATATATAATCTCCAATATGGCAATTT
ACGAGATATACTGTAGACCTTAAAATTCTGACGAAGTATTACTTTGACAA
GACTTATCGTGAGGCATTGAGAGATTTTAGAAgtatatttaaaagaaaaa
aaaaagactttagcTAGACATTACATTACGTGTCAATATGGCAAACGCAA
ATTAATTTGCGGATATTTTAGTGAATAGCATTTCATAATTACAAAAACAA
TTTCGTTTCTCTCTCAATCGGATGCAATTCAGTTGTAAAGAGTAATTTAC
GTCTGTACAACCCATTTCTTTCAAAGACATTTGAATTGTGTAAGACGAAA
AACAAAACCCAGAATAAACGCAATAGCTTGTAGAACCAATGCAAAAAGAC
CTAGAGGTCATCAAAAATGGGGATCATTCCTTTCCCTCAGTATCTTAATC
AACGTGGTTTTGCGACTGGAGCTATTCATCCCTTATGCTAAAATCATTAT
AAAGTGATTGAAGCCCGATTGAAGGGGCTACAGAGGAATCTTCAATCTTT
CTCAACTCAAGCTAGCAAAAGTTCAGCattaagattttaaattttgtgtg
AAAATGCTACATAAAGTTTTAAAGTTAATGAATAGTTCAATTGGATTTAA
TCGTTTGATTCCGTTCCCAATTTTTAGAGAGAGTGTATTTCAATCCACGT
TGGACAAGCTGGTTGTCAAATCGGTAACTCATGCTGGGAATTGTATTGTT
TGGAACATGGAATCTCCCCCGATGGAACAGCTACCAATGAAATCACTGGA
GATGAATCGTTCAGTACTTTCTTTAGCGAAACGGGTGCTGGAAGACATGT
TCCAAGAGCTGTTTTCGTTGATTTGGAACCATCGGTTATTGGTAAGATTC
TTTGCAGCAAACATCAAAACCTCGTCTATCTAAATTAGCCTATCTCAAAT
GATTCACTCATCTGTTACATGCTTTTTTATTCGAATTCAATTGATTTGAG
GAAATTCATGAACTTTCTTCTATTGCTGTTGATTTTGTAAAACTCAATTC
GTAAAAGAGTGTTCAAACATTAAAAGTTGAGTACTATGGTGACgtagaaa
aatatcatgtactgaaaacacGAATCCTATAAAATGTCAAGGTGAACTTT
GAGCTGACATAGTTTGGTGTCTGAAATTGACTGGAATTGACTTTTAGAGA
TACATCCTTTCAATTCAACTAACACTTTATTCAAAGTTGTTTGATACTTT
AGATGCGGATCAGAATGCAACATGCAAAATAGTTCTTCTGTTCAAACACA
AGCAGAAAGACTTTTTATTGAAGGACCTCAGATTTTCAGAAATCTAGAGG
AAGAACATAGGTGGTTTTAGACCCTGTAGAACTTATCAgatatttgtaat
tgtaattcattgtttttttaacGAGCGTTACGCTCCTTCGCATGTTCCCG
ACGTACTCGCTCTTGAATATTGTATCATTGTTTGATTATATATTGTAGTT
GAACACCATTTAAGAGTGCTCGATAACTGTGTAGAGCCAttcataaattt
atttcaagatTTCACTGTTAAAAAAGTACATTACTTCGAGTTTCATGCTT
ACGGCAAATCATCAGACGTACAAATAAAAACACTTTCCTATATTTATTTA
CAGATGAAATTCGATGCAGTACCTACAAATCCCTCTTCCATCCTGACCAA
ATGATCGCTGGTAAAGAAGACGCCGCTAACAATTACGCCAGAGGTCATTA
CACCGTCGGTAAAGAGTACATCGACCGAACTTTGGATCATATCCGTAAAT
TGGCGGATCAGTGCACTGGTCTCCAAGGATTCTTGTTGTTCCATTCCTTT
GGTGGAGGTACCGGATCTGGTTTCTCGTCTCTCCTCTTGGAAAGATTATC
CATTGATTTTGGTAAAAAAGCCAAATTGGAATTTGCTGTTTATCCAGCAC
CACAAGTCTCCACAGCTGTTGTTGAACCATACAACTCTGTCTTGACCACA
CATACCACTTTGGAGCACTCCGATTGCACTTTCATGGTGGATAATGAAGC
TATCTATGATATCTGTCGCAAGAATCTGGACGTCGAGCGTCCATCATATC
ACAATCTGAACCGAATGATCAGTCAAGTTGTTTCCTCAGTCACTGCATCT
CTTAGATTTGACGGCTCCTTGAATGTCGATTTGAATGAATTCCAAACCAA
CTTGGTTCCATACCCTAGAATCCATTTCCCGATGGCCACTTATGCTCCTT
TAGTTTCTGCTGAGAAAGCATACCACGAAAATCATTCAGTTCAAGAAATC
ACAAATGCTTGTTTTGAGCCTCAAAATCAACTAGTCAAATGTGATCCAAG
ACACGGCAAATACATGTCTTGTTGTCTTCTCTACCGTGGAGATGTGGTCC
CAAAAGATGTCAATGCTTCCATCTCTGCCTTGAAAACTAAACGCACTATT
CAATTCGTCGATTGGTGTCCAACCGGATTCAAAATCGGAATCAATTACCA
GCCACCAACTATTGTTCCTGGAGCAGACATGGCTAAAGTTTCCAGAGCTG
TTTGCATGTTGTCTAACACAACTGCCATTGCTGAAGCATGGGCTCGTCTT
GATCATAAATTCGATTTAATGTACGCAAAACGTGCTTTTGTGCACTGGTA
TGTCGGAGAAGGTAAGTTgcagtattttcaaaaataactgATGAGGTTTA
TCAGTAGGCGAAGGAATCTTACTAAAACCTACCAACCTAATAGTGATTTC
AGCAAACCCAAGGTCCTCTTTGTATATGGATAGCTAGCTGTCTACTCAAA
ATTACGACCGTAGCAGAATGCTATACCTTTATACTAAGGTCACGTGGTCT
TacttattgttgttgttgttgttgttgttgttgttgttggtctCATTAGG
ATTTAGCTTGACTCATTTTCCATAAAcataccgagtttatcgttttACAT
CTGAAATTTGAGTTTTACGTCATTTGAGGTCAATCAATACCttgattggt
agtgtgaaggtttcgatcacagacttgcaccgcaatggactgtgttcgaa
ttcCAAGCAATGCCAGCACTGCCAgacagggtgttagggaaatatggtga
tagactctctaccttcactcatacACAATTTCTATATTTCATTTCTAGGT
ATGGAAGAAGGTGAGTTTTCGGAGGCTCGTGAAGATTTAGCTGCTCTTGA
GAAAGATTACGAAGAGGTTGGTATGGATTCAGCAGATTGTGAAGACGAAG
AAGATGAAGATTATTGA Coding sequence (CDS) from alignment at sc0000302_pilon:230633..234049+ >XLOC_045131 ID=XLOC_045131|Name=XLOC_045131|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2886bp|location=Sequence derived from alignment at sc0000302_pilon:230633..234049+ (Clytia hemisphaerica_ch_hm2_pilon)
aaattaaaaaaaatttattttgctgTCCTTACTGCGAtttttttGCTCTT
GCTTTGCAGAAGAAACAACGTTGAAAATAAGATCTTGGAGGTTGAAAAGA
TGaaattaaaaaaaatttattttgctgTCCTTACTGCGAtttttttGCTC
TTGCTTTGCAGAAGAAACAACGTTGAAAATAAGATCTTGGAGGTTGAAAA
GATGAGAGAGTGTATTTCAATCCACGTTGGACAAGCTGGTTGTCAAATCG
GTAACTCATGCTGGGAATTGTATTGTTTGGAACATGGAATCTCCCCCGAT
GGAACAGCTACCAATGAAATCACTGGAGATGAATCGTTCAGTACTTTCTT
TAGCGAAACGGGTGCTGGAAGACATGTTCCAAGAGCTGTTTTCGTTGATT
TGGAACCATCGGTTATTGAGAGAGTGTATTTCAATCCACGTTGGACAAGC
TGGTTGTCAAATCGGTAACTCATGCTGGGAATTGTATTGTTTGGAACATG
GAATCTCCCCCGATGGAACAGCTACCAATGAAATCACTGGAGATGAATCG
TTCAGTACTTTCTTTAGCGAAACGGGTGCTGGAAGACATGTTCCAAGAGC
TGTTTTCGTTGATTTGGAACCATCGGTTATTGATGAAATTCGATGCAGTA
CCTACAAATCCCTCTTCCATCCTGACCAAATGATCGCTGGTAAAGAAGAC
GCCGCTAACAATTACGCCAGAGGTCATTACACCGTCGGTAAAGAGTACAT
CGACCGAACTTTGGATCATATCCGTAAATTGGCGGATCAGTGCACTGGTC
TCCAAGGATTCTTGTTGTTCCATTCCTTTGGTGGAGGTACCGGATCTGGT
TTCTCGTCTCTCCTCTTGGAAAGATTATCCATTGATTTTGGTAAAAAAGC
CAAATTGGAATTTGCTGTTTATCCAGCACCACAAGTCTCCACAGCTGTTG
TTGAACCATACAACTCTGTCTTGACCACACATACCACTTTGGAGCACTCC
GATTGCACTTTCATGGTGGATAATGAAGCTATCTATGATATCTGTCGCAA
GAATCTGGACGTCGAGCGTCCATCATATCACAATCTGAACCGAATGATCA
GTCAAGTTGTTTCCTCAGTCACTGCATCTCTTAGATTTGACGGCTCCTTG
AATGTCGATTTGAATGAATTCCAAACCAACTTGGTTCCATACCCTAGAAT
CCATTTCCCGATGGCCACTTATGCTCCTTTAGTTTCTGCTGAGAAAGCAT
ACCACGAAAATCATTCAGTTCAAGAAATCACAAATGCTTGTTTTGAGCCT
CAAAATCAACTAGTCAAATGTGATCCAAGACACGGCAAATACATGTCTTG
TTGTCTTCTCTACCGTGGAGATGTGGTCCCAAAAGATGTCAATGCTTCCA
TCTCTGCCTTGAAAACTAAACGCACTATTCAATTCGTCGATTGGTGTCCA
ACCGGATTCAAAATCGGAATCAATTACCAGCCACCAACTATTGTTCCTGG
AGCAGACATGGCTAAAGTTTCCAGAGCTGTTTGCATGTTGTCTAACACAA
CTGCCATTGCTGAAGCATGGGCTCGTCTTGATCATAAATTCGATTTAATG
TACGCAAAACGTGCTTTTGTGCACTGGTATGTCGGAGAAGATGAAATTCG
ATGCAGTACCTACAAATCCCTCTTCCATCCTGACCAAATGATCGCTGGTA
AAGAAGACGCCGCTAACAATTACGCCAGAGGTCATTACACCGTCGGTAAA
GAGTACATCGACCGAACTTTGGATCATATCCGTAAATTGGCGGATCAGTG
CACTGGTCTCCAAGGATTCTTGTTGTTCCATTCCTTTGGTGGAGGTACCG
GATCTGGTTTCTCGTCTCTCCTCTTGGAAAGATTATCCATTGATTTTGGT
AAAAAAGCCAAATTGGAATTTGCTGTTTATCCAGCACCACAAGTCTCCAC
AGCTGTTGTTGAACCATACAACTCTGTCTTGACCACACATACCACTTTGG
AGCACTCCGATTGCACTTTCATGGTGGATAATGAAGCTATCTATGATATC
TGTCGCAAGAATCTGGACGTCGAGCGTCCATCATATCACAATCTGAACCG
AATGATCAGTCAAGTTGTTTCCTCAGTCACTGCATCTCTTAGATTTGACG
GCTCCTTGAATGTCGATTTGAATGAATTCCAAACCAACTTGGTTCCATAC
CCTAGAATCCATTTCCCGATGGCCACTTATGCTCCTTTAGTTTCTGCTGA
GAAAGCATACCACGAAAATCATTCAGTTCAAGAAATCACAAATGCTTGTT
TTGAGCCTCAAAATCAACTAGTCAAATGTGATCCAAGACACGGCAAATAC
ATGTCTTGTTGTCTTCTCTACCGTGGAGATGTGGTCCCAAAAGATGTCAA
TGCTTCCATCTCTGCCTTGAAAACTAAACGCACTATTCAATTCGTCGATT
GGTGTCCAACCGGATTCAAAATCGGAATCAATTACCAGCCACCAACTATT
GTTCCTGGAGCAGACATGGCTAAAGTTTCCAGAGCTGTTTGCATGTTGTC
TAACACAACTGCCATTGCTGAAGCATGGGCTCGTCTTGATCATAAATTCG
ATTTAATGTACGCAAAACGTGCTTTTGTGCACTGGTATGTCGGAGAAGGT
ATGGAAGAAGGTGAGTTTTCGGAGGCTCGTGAAGATTTAGCTGCTCTTGA
GAAAGATTACGAAGAGGTTGGTATGGATTCAGCAGATTGTGAAGACGAAG
AAGATGAAGATTATTGAGTATGGAAGAAGGTGAGTTTTCGGAGGCTCGTG
AAGATTTAGCTGCTCTTGAGAAAGATTACGAAGAGGTTGGTATGGATTCA
GCAGATTGTGAAGACGAAGAAGATGAAGATTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000302_pilon | genome | sc0000302_pilon:230633..234049 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1327-1443:3301 |
| Aaloc | 319-1323:1806 |
| Aaloc | 103-315:828 |
| Aaloc | 1-102:1 |
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