XLOC_045130 (mRNA) -

Overview
NameXLOC_045130
Unique NameXLOC_045130
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000302_pilon:208245..209201+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045130 ID=XLOC_045130|Name=XLOC_045130|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=957bp|location=Sequence derived from alignment at sc0000302_pilon:208245..209201+ (Clytia hemisphaerica_ch_hm2_pilon)
CCATTTTGTCTTGCATACGGATGCAGTAATGCATCAGGtagaaatgtaaa aaataaaggTTTCTTCAAGATTCCTGATCCAAAGAGATATCACGAACAAT GTGCACGTTGGCTACATAACATGGGGAATTCAAAGTATAATGCTAAAAAT TTCGAAGCTAAAGTACATCATGTTGTATGCAGTgaccattttcaccctga ttgTTTCAAGAGAGATCTAAAGAGAGAACTTTGCCCTGATTACAAGGATA CAAGAGCAAAAAGAGAACTCGTAGACGGAGCAATACCGACTATATTCAAA CACCGCACTTACGATCAGATTAACATGGATGGTACAAAAATCATGTCAAG ACCGCCCAGTAAAAGAACTTTAAAAATGGAGAGAGCTAATGTAAGACATT CATAAATCcctaaatttagtttttaaggAGGATAACAAAACTTCTAGCTA GTGATATTTGTTCACTAAATAGCACAAACTCTTTAACTTCGAATCCTCTT CGTGTCCAATAAACTATAATTTCAATTTAAGATATAGTCTTTTAAACGAT TTTTTAAGGTTGTCAAGAAGCTGCTTTTGCAAAATGAACCTCCTAAACCT GGCGGGGATACCCAACCGATCGACGATACAGATGAAACAAGTGGAACCAT TGTTAATGAAAACGATTCCTCTGAGATTTTGGATGAAAACACAGGAATAA ATATCGATATACGTGTATCAACCACCATCAAAAATAGTATACCGATAAAA AATGAACCAAGTACTGAACGAAAAACTGTAGAAAAGGAAGTCGTAACCAC CCAAATTGCAACCCAAACATATGTTTTGAAAAGGAAAGAGAAGGGAGAAA ATTTAAACCAGAAAGCTTATGAACTTGCCGAAAGACTAGTTGGTTCCAAA AACATTTCTTTGGCTGATTATCGATTATCAGCTAATGCCCTTTTAAAACC AGTGTAG

Coding sequence (CDS) from alignment at sc0000302_pilon:208245..209201+

>XLOC_045130 ID=XLOC_045130|Name=XLOC_045130|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1578bp|location=Sequence derived from alignment at sc0000302_pilon:208245..209201+ (Clytia hemisphaerica_ch_hm2_pilon)
CCATTTTGTCTTGCATACGGATGCAGTAATGCATCAGGtagaaatgtaaa
aaataaaggTTTCTTCAAGATTCCTGATCCAAAGAGATATCACGAACAAT
GTGCACGTTGGCTACATAACATGGGGAATTCAAAGTATAATGCTAAAAAT
TTCGAAGCTAAAGTACATCATGTTGTATGCAGTgaccattttcaccctga
ttgTTTCAAGAGAGATCTAAAGAGAGAACTTTGCCCTGATTACAAGGATA
CAAGAGCAAAAAGAGAACTCGTAGACGGAGCAATACCGACTATATTCAAA
CACCGCACTTACGATCAGATTAACATGGATGGTACAAAAATCATGTCAAG
ACCGCCCAGTAAAAGAACTTTAAAAATGGAGAGAGCTAATCCATTTTGTC
TTGCATACGGATGCAGTAATGCATCAGGtagaaatgtaaaaaataaaggT
TTCTTCAAGATTCCTGATCCAAAGAGATATCACGAACAATGTGCACGTTG
GCTACATAACATGGGGAATTCAAAGTATAATGCTAAAAATTTCGAAGCTA
AAGTACATCATGTTGTATGCAGTgaccattttcaccctgattgTTTCAAG
AGAGATCTAAAGAGAGAACTTTGCCCTGATTACAAGGATACAAGAGCAAA
AAGAGAACTCGTAGACGGAGCAATACCGACTATATTCAAACACCGCACTT
ACGATCAGATTAACATGGATGGTACAAAAATCATGTCAAGACCGCCCAGT
AAAAGAACTTTAAAAATGGAGAGAGCTAATGTTGTCAAGAAGCTGCTTTT
GCAAAATGAACCTCCTAAACCTGGCGGGGATACCCAACCGATCGACGATA
CAGATGAAACAAGTGGAACCATTGTTAATGAAAACGATTCCTCTGAGATT
TTGGATGAAAACACAGGAATAAATATCGATATACGTGTATCAACCACCAT
CAAAAATAGTATACCGATAAAAAATGAACCAAGTACTGAACGAAAAACTG
TAGAAAAGGAAGTCGTAACCACCCAAATTGCAACCCAAACATATGTTTTG
AAAAGGAAAGAGAAGGGAGAAAATTTAAACCAGAAAGCTTATGAACTTGC
CGAAAGACTAGTTGGTTCCAAAAACATTTCTTTGGCTGATTATCGATTAT
CAGCTAATGCCCTTTTAAAACCAGTGTAGGTTGTCAAGAAGCTGCTTTTG
CAAAATGAACCTCCTAAACCTGGCGGGGATACCCAACCGATCGACGATAC
AGATGAAACAAGTGGAACCATTGTTAATGAAAACGATTCCTCTGAGATTT
TGGATGAAAACACAGGAATAAATATCGATATACGTGTATCAACCACCATC
AAAAATAGTATACCGATAAAAAATGAACCAAGTACTGAACGAAAAACTGT
AGAAAAGGAAGTCGTAACCACCCAAATTGCAACCCAAACATATGTTTTGA
AAAGGAAAGAGAAGGGAGAAAATTTAAACCAGAAAGCTTATGAACTTGCC
GAAAGACTAGTTGGTTCCAAAAACATTTCTTTGGCTGATTATCGATTATC
AGCTAATGCCCTTTTAAAACCAGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_045130XLOC_045130-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000302_pilongenomesc0000302_pilon:208245..209201 +
Properties
Property NameValue
Aaloc472-783:646
Aaloc391-471:559
Aaloc1-390:1