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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000181_pilon:12319..15396- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045120 ID=XLOC_045120|Name=XLOC_045120|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3078bp|location=Sequence derived from alignment at sc0000181_pilon:12319..15396- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAAAGACATTATAAAGGCAGCAATGAAGGTTTATTCTGTGAAAGG
ACTTTATGTTGATAATTTAGAAGCAGAAGTAGAATCAACCTGGACCTTTT
CAGGTGGTCTTTTCTTCACCGCAACCCTGGTCACCACTATTGGTAAGAGT
TTCAATTTATTGACTCACTGTTTCACTCCTTTGTGATTTTACTATTGCCC
TTTCGCACACCCCTGTCTCACAGCCCCGGTCGAACTCTTTTCCTCAATGG
GAATAAAATTCCTATTGAAATTCCAATTCTATTGTTCTATTCCAAGATTA
AAACCCAGTGGGGATGGTTTTAGAGTGCAACTTAAACATTAAATTTCGAG
TGGAGATGAAATCAAAGTTAATTTTCCAGTGGGGCTGAAATTCCAGGGTA
TTTTCCCACCGGGAACAAAATTTTCGCTAACTTTTCCAGTGGGTTTGTGA
CACAAGGGTGTATAAACACTCGGTTTTTCATTTAACTGAGAGTTTTTCAA
TTTATTGACTCACAGTCTCACTCCTTTGTGATTTTACTTCATTTAACTGG
CCTGTCTCGATTGTTTTTTCATGATTACTATCTACGTTTAAAGAGCTTCT
CTCTTTCATTCATTAATTTTTTACTGACCCCGTACTGAAGAACCGAAGCT
GCAATCACATTTTCAGGTCTGTTCAAAGAACATGTATCTCACTGAGCCGT
CTGAATGAATTTGAAAAAATTGAACAACAAGATTCAACCACACTTAAAAT
TGCAGTATCTTACTAAATCTGCCCATTTCTTTATGAGTGACACAATTTAC
GGATCAGGGATGGGGTTGCTTAAGCATTCTAAGTCATTTTTGAGAAATTT
GCTTTGACCACCCCTGATATTATACCATATTTATATTTGCTTCAAGTGCT
GTCGTTTGCCATGCTTAGATTATCTAAAAAGCTTTACTATACAAGATAGT
GAAAGAAATTTGGCTTGAGCCTTAACAGCCTGTTTGGTTATATGAAAATG
TATATTGTTTAATATTTTCTCAATGGTCATAGGTTATGGCGATCGGTATC
CATTGACAACAGGGGGCCGTTGGTTTACCATTGTCTATGCTCTCTTTGGA
ATCCCGCTCACTGGTGTCATTCTCACAAAGATTGGTTTCAGATTGACCAA
ACTTGTCAAGAAAATGGATAATTTACTCACAAAACCAATCAAGAAAACTC
TCGGTTAGTAGTATGCTTTTCATATTTCAAAAGTTCTTTCAGGCTAACAT
TAATCCACTCGAAGTTATCTTTCAAAACTCTATAGAAAATTAAGTATTGC
AATAAAGATTTGAATTGATAAATTGAATCATCTTTAGTTACGAAAGTGTT
TCTTAAAATTTTTAAGGTGTTTTGGCAGCAGAGTCAGAGAATCGAATAAA
GTTTTACGTTCGAATTATTCAACTGTTGATTGTGGTTGCTTTGTTTTTGT
TGTTGTTTTGGATAATCCCTGCTATCATCATGGTCGAAATTGAAGAGGAA
TGGGATCTAATCACTGCCATTTATTTCTGCTTCATCACCATAACAACCGT
GGGACTGGGTAAGAGTCAACCCATTTCAAATACCCAGGACAACAACAATA
TCAATACCCAGCTCCGAGTAATTTCTCCTGTCAAATAGTGAATAAGACTA
AAAAGAATTGTTTATTTCATTCAACGATCTTACAAAATTTAATCAAAACT
ATGTGCCGCCCTTAAGGGTACTTTTTTTGGACTTCCAAAGCCCCGCTAAA
GGTCGAAAAAATAGGAAAATTTCAACTTTTTAACCCCTGAAAGATCGAAA
TTTGGTCAAAATTGGTCAAATTTGTCCCGCTAAGGGTCGTGAAATCCCCA
AAAATTTTCATTAGTTTTCTCCTTTTTAGTCCCGGTAAGGGTCCTCCAAA
GTTCGAATGTACCCCCCCGTCAGCTCACAACACTAGTACCCCCGGGGTTT
CAATGTTGACATGTTGTACTATTTGCAGGAGATATAACACCAGGGACGTC
AGACGTGAGCGTGGAATTGGGAGATGAAGCATTCAGTGCCAGTAATATGA
AAGCAGCAGCGTTACAGGTAGGGATTATTACTTTCATGTCAGAAATTAAA
GTACTTTAATGGGATAAACTTTCGTGGGGATTAAATTTCGCGGTCGGGCC
TATCCGCGAAATTCAAAAATTTCGAAGGGACTTAATTTTTGAAATACGCA
TTATTTGCGCTTCTTTGATGCAAGTAGCCATTGAAATAGTATTTATTTGA
TATATTTTGAGTTTTGTTTAGAAATATTTCGCGGATAAGAACCTTCCAAA
TTTAATCCCCGCGAAAGTTTATCCCATTAAAGTAATCAATTGTGAATATT
CTTCAAAAAGCTCTATACATGACTCTTTGATAAGGTTGTACTAATACCTA
TTGAGTTTCAATTAAATAGCGTTCAGTACTAGTTTCTTCAGTTTCTGCTC
AAAAATCCGCTTCAACATTATACATTTTTCTTTTAACCTTATATTTAGTT
GTTAATATTCCAGGCGGGTCGAAGTTACAAATTTTTGAGACCCGGGTGTA
ATAGTCTACCCATAGTTTTTCCATGATTGAATACCATTTTTTCTAATTTC
ATCACAGGTATCAACGCTACTTTACTTCTTACTCGGCTTGTCAGCGTTGA
CCATTATTCTCGGTCTCGTCACCTCCATGTTACATCATTTAGCTGATCAA
GCCAAGTCAAAAGCGGAACAAGGCATGAACATGCTTGGAAATGTTCGTCA
AAGCGTGATGGATAAAACAAGACGTTTAACAGGTGCACCCCCCTCACCTC
AGAAAAAGTCGGTAACAGAAAAATCACCTGAACTAGCCTCAGTTCCTGAA
GAACATGAAACAGATGGTATAGATCAAGCACCTGAACTGTCCATGGATGC
TTTATTAGCAACAGAATCAGAGGCTAGTGAGAGCCTTTTCAACTTAGGCT
ATGATGATGACGAAACCAAAAGCGATAAAGCTGGAAGTCCTGTCAAAGTC
AATCAGAAGCATAAAGAAAGAACTGACTCCAAAACCAGTTTAATCGGGCA
AGAAAATCATTTACCTAATATTGTGTAA Coding sequence (CDS) from alignment at sc0000181_pilon:12319..15396- >XLOC_045120 ID=XLOC_045120|Name=XLOC_045120|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2130bp|location=Sequence derived from alignment at sc0000181_pilon:12319..15396- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAAAGACATTATAAAGGCAGCAATGAAGGTTTATTCTGTGAAAGG
ACTTTATGTTGATAATTTAGAAGCAGAAGTAGAATCAACCTGGACCTTTT
CAGGTGGTCTTTTCTTCACCGCAACCCTGGTCACCACTATTGATGATCAA
AGACATTATAAAGGCAGCAATGAAGGTTTATTCTGTGAAAGGACTTTATG
TTGATAATTTAGAAGCAGAAGTAGAATCAACCTGGACCTTTTCAGGTGGT
CTTTTCTTCACCGCAACCCTGGTCACCACTATTGGTTATGGCGATCGGTA
TCCATTGACAACAGGGGGCCGTTGGTTTACCATTGTCTATGCTCTCTTTG
GAATCCCGCTCACTGGTGTCATTCTCACAAAGATTGGTTTCAGATTGACC
AAACTTGTCAAGAAAATGGATAATTTACTCACAAAACCAATCAAGAAAAC
TCTCGGTTATGGCGATCGGTATCCATTGACAACAGGGGGCCGTTGGTTTA
CCATTGTCTATGCTCTCTTTGGAATCCCGCTCACTGGTGTCATTCTCACA
AAGATTGGTTTCAGATTGACCAAACTTGTCAAGAAAATGGATAATTTACT
CACAAAACCAATCAAGAAAACTCTCGGTGTTTTGGCAGCAGAGTCAGAGA
ATCGAATAAAGTTTTACGTTCGAATTATTCAACTGTTGATTGTGGTTGCT
TTGTTTTTGTTGTTGTTTTGGATAATCCCTGCTATCATCATGGTCGAAAT
TGAAGAGGAATGGGATCTAATCACTGCCATTTATTTCTGCTTCATCACCA
TAACAACCGTGGGACTGGGTGTTTTGGCAGCAGAGTCAGAGAATCGAATA
AAGTTTTACGTTCGAATTATTCAACTGTTGATTGTGGTTGCTTTGTTTTT
GTTGTTGTTTTGGATAATCCCTGCTATCATCATGGTCGAAATTGAAGAGG
AATGGGATCTAATCACTGCCATTTATTTCTGCTTCATCACCATAACAACC
GTGGGACTGGGAGATATAACACCAGGGACGTCAGACGTGAGCGTGGAATT
GGGAGATGAAGCATTCAGTGCCAGTAATATGAAAGCAGCAGCGTTACAGG
AGATATAACACCAGGGACGTCAGACGTGAGCGTGGAATTGGGAGATGAAG
CATTCAGTGCCAGTAATATGAAAGCAGCAGCGTTACAGGTATCAACGCTA
CTTTACTTCTTACTCGGCTTGTCAGCGTTGACCATTATTCTCGGTCTCGT
CACCTCCATGTTACATCATTTAGCTGATCAAGCCAAGTCAAAAGCGGAAC
AAGGCATGAACATGCTTGGAAATGTTCGTCAAAGCGTGATGGATAAAACA
AGACGTTTAACAGGTGCACCCCCCTCACCTCAGAAAAAGTCGGTAACAGA
AAAATCACCTGAACTAGCCTCAGTTCCTGAAGAACATGAAACAGATGGTA
TAGATCAAGCACCTGAACTGTCCATGGATGCTTTATTAGCAACAGAATCA
GAGGCTAGTGAGAGCCTTTTCAACTTAGGCTATGATGATGACGAAACCAA
AAGCGATAAAGCTGGAAGTCCTGTCAAAGTCAATCAGAAGCATAAAGAAA
GAACTGACTCCAAAACCAGTTTAATCGGGCAAGAAAATCATTTACCTAAT
ATTGTGTAAGTATCAACGCTACTTTACTTCTTACTCGGCTTGTCAGCGTT
GACCATTATTCTCGGTCTCGTCACCTCCATGTTACATCATTTAGCTGATC
AAGCCAAGTCAAAAGCGGAACAAGGCATGAACATGCTTGGAAATGTTCGT
CAAAGCGTGATGGATAAAACAAGACGTTTAACAGGTGCACCCCCCTCACC
TCAGAAAAAGTCGGTAACAGAAAAATCACCTGAACTAGCCTCAGTTCCTG
AAGAACATGAAACAGATGGTATAGATCAAGCACCTGAACTGTCCATGGAT
GCTTTATTAGCAACAGAATCAGAGGCTAGTGAGAGCCTTTTCAACTTAGG
CTATGATGATGACGAAACCAAAAGCGATAAAGCTGGAAGTCCTGTCAAAG
TCAATCAGAAGCATAAAGAAAGAACTGACTCCAAAACCAGTTTAATCGGG
CAAGAAAATCATTTACCTAATATTGTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000181_pilon | genome | sc0000181_pilon:12319..15396 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 595-1065:472 |
| Aaloc | 508-594:1099 |
| Aaloc | 316-504:1711 |
| Aaloc | 145-312:2045 |
| Aaloc | 1-141:3079 |
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