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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000375_pilon:105986..107956- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045110 ID=XLOC_045110|Name=XLOC_045110|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1971bp|location=Sequence derived from alignment at sc0000375_pilon:105986..107956- (Clytia hemisphaerica_ch_hm2_pilon)
GACGAACTAAAAGACTTATATGTTCCAGAAAGCTCATCAGCTTCAAGTAG
AGACAGTCTTAATCTAACCGTTTTCAACCTGATAAATCCTAAAGCAGATT
GGTTCCCAAACCATAAAGTCATCGCATGCGGAAGACCAAAAGCTGTCGAA
TTTCTGAAGAAAGAAATTCCTATCAATTCCAATCGAAAAAACATTGAAGT
TTGTGGGTTTGACGATGAGAACATCTGGAAATATATTCAGAACTTTTTCG
GTGAACGTAAAGACAAAGCACTTTCTGTCCATCAACTCATCAAACGATCA
TACAATTTACGCATAATGGCGCGTGTTCCAGTCTTTTTATCCGTAATCTG
TACAGTTTTCGAGGAAGATTTGATAAAAAATCCCATTAACACACAAACTG
AACTTTACTTCTTCACAACACTCATTTTCATTAGAAACCATCTCAAAAGA
CAATCGCAGTCTTACACAAACTTGATGGATATTGCCAAAGATAAAACCGT
CGCTGAAATATTGTTATGTTTAATGAAACTATCTGTCACAACGTATATGC
AAAACAAGGTGGTCTTTAATGAAGCAGAAATCGCATCGCTGAGGTGTCCG
ATACCGCTCGAGGAAACCGGCTTTATTACAAAGCACCAGAGATCAAATTC
TACGGAAGTGACTTTTCAATTCCGTCACTTAATACTCCATGAGTATTTGA
CAGGATTGTATATCTCAATCACAAAAGATATCACACCATTTTTTGAAAAT
AAAGAACTATCAAGTTGCAAACCAACCATTTTGGGAATTCAACGGATGCT
GAAAATGGACGAGAATGAACTCTTCCTTGCATTTTTTAAAAACCTACAAA
ACACAAACCACAAACCACGATCCAAGTCTCTCTCCTTCAAGAATCTATTT
CCAAACATTTTTGGAAAAAGTAAGCCAAACTTTGAAGACTTTATTGGCAG
CTTCATCGAGATGCCGTCATCAATGATCAAAGATGAAGACTCACTTCTCA
TCGACACTGGAAGAAATGATCACATTGAATTTCTTACGCTATATAAAGAA
TCACGTGACAACCTTATCTCGAAACGATTTGTGGAAGCAAAGATTATTAT
CAGAGAAAATTATAAAGATGTTCGAAACATCATCAATTTGATAAACGATT
TGAACATAAAAAACATTGTTGAGCTTGAAATATGGATTCCATCATATGAT
GAGGATGAAAAGTATCTCATTTCTTTGGTATCGGGTGAGGAATGCGAGAC
AGAGATCAGAATCGTTGATGATCGTTATACACCATACCTCAAATGCAAAC
AAGGAAAACTTACTTTGAAGTGTCCTCCCTCTTTATTGAACAAAATACCA
GAAGATTTGTTACAAAAGTCAACTTCGTTCCATGTTACAATTAAGACTTT
TACCGATGTTAATAATAGTGATGGAGTGAAATTAGTTATTCGGCGCTTGT
TATCATACAACACACCAATCGCATGTTTAAATATTGTGACAATTACTTTG
TACGTCAGAACTATCATCAATATGATAAACGATTTGAACATAAAAAACAT
TGGTTTTCTTACAGTATGCTATCCATCATATAATGAGGATGAAAAGTATC
TCATTTCTTTGGTATCAGGTGAGGAATGCGAGACAGAGATCAGAATCGAA
CAATATACACCATATCTCATTTGCGAACAAGGAAAACTTACTTTTGAGTG
TCTTCCTTCTTTATTGAAGGAAATACCAGAAGATTTGTTACAAAAGTCAA
CTTCGTTTCATGTTGAAATTTGGAACAAATTTGTTGAAGAGACAAACGTA
ATAAACTTTTTACGCCATTTGACGTCATTCAACAAACCAATCACTATACG
GGTGGAGAAGAGGATATCAATGTTTCAAGCACCTTCTTATGCTGTGGAAA
GTGAAATTCGACGGTTGTTGGAGAAACACAACATTGATACAAGTAGTATT
GAAATAAATGATTATTTCTGA Coding sequence (CDS) from alignment at sc0000375_pilon:105986..107956- >XLOC_045110 ID=XLOC_045110|Name=XLOC_045110|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3942bp|location=Sequence derived from alignment at sc0000375_pilon:105986..107956- (Clytia hemisphaerica_ch_hm2_pilon)
GACGAACTAAAAGACTTATATGTTCCAGAAAGCTCATCAGCTTCAAGTAG
AGACAGTCTTAATCTAACCGTTTTCAACCTGATAAATCCTAAAGCAGATT
GGTTCCCAAACCATAAAGTCATCGCATGCGGAAGACCAAAAGCTGTCGAA
TTTCTGAAGAAAGAAATTCCTATCAATTCCAATCGAAAAAACATTGAAGT
TTGTGGGTTTGACGATGAGAACATCTGGAAATATATTCAGAACTTTTTCG
GTGAACGTAAAGACAAAGCACTTTCTGTCCATCAACTCATCAAACGATCA
TACAATTTACGCATAATGGCGCGTGTTCCAGTCTTTTTATCCGTAATCTG
TACAGTTTTCGAGGAAGATTTGATAAAAAATCCCATTAACACACAAACTG
AACTTTACTTCTTCACAACACTCATTTTCATTAGAAACCATCTCAAAAGA
CAATCGCAGTCTTACACAAACTTGATGGATATTGCCAAAGATAAAACCGT
CGCTGAAATATTGTTATGTTTAATGAAACTATCTGTCACAACGTATATGC
AAAACAAGGTGGTCTTTAATGAAGCAGAAATCGCATCGCTGAGGTGTCCG
ATACCGCTCGAGGAAACCGGCTTTATTACAAAGCACCAGAGATCAAATTC
TACGGAAGTGACTTTTCAATTCCGTCACTTAATACTCCATGAGTATTTGA
CAGGATTGTATATCTCAATCACAAAAGATATCACACCATTTTTTGAAAAT
AAAGAACTATCAAGTTGCAAACCAACCATTTTGGGAATTCAACGGATGCT
GAAAATGGACGAGAATGAACTCTTCCTTGCATTTTTTAAAAACCTACAAA
ACACAAACCACAAACCACGATCCAAGTCTCTCTCCTTCAAGAATCTATTT
CCAAACATTTTTGGAAAAAGTAAGCCAAACTTTGAAGACTTTATTGGCAG
CTTCATCGAGATGCCGTCATCAATGATCAAAGATGAAGACTCACTTCTCA
TCGACACTGGAAGAAATGATCACATTGAATTTCTTACGCTATATAAAGAA
TCACGTGACAACCTTATCTCGAAACGATTTGTGGAAGCAAAGATTATTAT
CAGAGAAAATTATAAAGATGTTCGAAACATCATCAATTTGATAAACGATT
TGAACATAAAAAACATTGTTGAGCTTGAAATATGGATTCCATCATATGAT
GAGGATGAAAAGTATCTCATTTCTTTGGTATCGGGTGAGGAATGCGAGAC
AGAGATCAGAATCGTTGATGATCGTTATACACCATACCTCAAATGCAAAC
AAGGAAAACTTACTTTGAAGTGTCCTCCCTCTTTATTGAACAAAATACCA
GAAGATTTGTTACAAAAGTCAACTTCGTTCCATGTTACAATTAAGACTTT
TACCGATGTTAATAATAGTGATGGAGTGAAATTAGTTATTCGGCGCTTGT
TATCATACAACACACCAATCGCATGTTTAAATATTGTGACAATTACTTTG
TACGTCAGAACTATCATCAATATGATAAACGATTTGAACATAAAAAACAT
TGGTTTTCTTACAGTATGCTATCCATCATATAATGAGGATGAAAAGTATC
TCATTTCTTTGGTATCAGGTGAGGAATGCGAGACAGAGATCAGAATCGAA
CAATATACACCATATCTCATTTGCGAACAAGGAAAACTTACTTTTGAGTG
TCTTCCTTCTTTATTGAAGGAAATACCAGAAGATTTGTTACAAAAGTCAA
CTTCGTTTCATGTTGAAATTTGGAACAAATTTGTTGAAGAGACAAACGTA
ATAAACTTTTTACGCCATTTGACGTCATTCAACAAACCAATCACTATACG
GGTGGAGAAGAGGATATCAATGTTTCAAGCACCTTCTTATGCTGTGGAAA
GTGAAATTCGACGGTTGTTGGAGAAACACAACATTGATACAAGTAGTATT
GAAATAAATGATTATTTCTGAGACGAACTAAAAGACTTATATGTTCCAGA
AAGCTCATCAGCTTCAAGTAGAGACAGTCTTAATCTAACCGTTTTCAACC
TGATAAATCCTAAAGCAGATTGGTTCCCAAACCATAAAGTCATCGCATGC
GGAAGACCAAAAGCTGTCGAATTTCTGAAGAAAGAAATTCCTATCAATTC
CAATCGAAAAAACATTGAAGTTTGTGGGTTTGACGATGAGAACATCTGGA
AATATATTCAGAACTTTTTCGGTGAACGTAAAGACAAAGCACTTTCTGTC
CATCAACTCATCAAACGATCATACAATTTACGCATAATGGCGCGTGTTCC
AGTCTTTTTATCCGTAATCTGTACAGTTTTCGAGGAAGATTTGATAAAAA
ATCCCATTAACACACAAACTGAACTTTACTTCTTCACAACACTCATTTTC
ATTAGAAACCATCTCAAAAGACAATCGCAGTCTTACACAAACTTGATGGA
TATTGCCAAAGATAAAACCGTCGCTGAAATATTGTTATGTTTAATGAAAC
TATCTGTCACAACGTATATGCAAAACAAGGTGGTCTTTAATGAAGCAGAA
ATCGCATCGCTGAGGTGTCCGATACCGCTCGAGGAAACCGGCTTTATTAC
AAAGCACCAGAGATCAAATTCTACGGAAGTGACTTTTCAATTCCGTCACT
TAATACTCCATGAGTATTTGACAGGATTGTATATCTCAATCACAAAAGAT
ATCACACCATTTTTTGAAAATAAAGAACTATCAAGTTGCAAACCAACCAT
TTTGGGAATTCAACGGATGCTGAAAATGGACGAGAATGAACTCTTCCTTG
CATTTTTTAAAAACCTACAAAACACAAACCACAAACCACGATCCAAGTCT
CTCTCCTTCAAGAATCTATTTCCAAACATTTTTGGAAAAAGTAAGCCAAA
CTTTGAAGACTTTATTGGCAGCTTCATCGAGATGCCGTCATCAATGATCA
AAGATGAAGACTCACTTCTCATCGACACTGGAAGAAATGATCACATTGAA
TTTCTTACGCTATATAAAGAATCACGTGACAACCTTATCTCGAAACGATT
TGTGGAAGCAAAGATTATTATCAGAGAAAATTATAAAGATGTTCGAAACA
TCATCAATTTGATAAACGATTTGAACATAAAAAACATTGTTGAGCTTGAA
ATATGGATTCCATCATATGATGAGGATGAAAAGTATCTCATTTCTTTGGT
ATCGGGTGAGGAATGCGAGACAGAGATCAGAATCGTTGATGATCGTTATA
CACCATACCTCAAATGCAAACAAGGAAAACTTACTTTGAAGTGTCCTCCC
TCTTTATTGAACAAAATACCAGAAGATTTGTTACAAAAGTCAACTTCGTT
CCATGTTACAATTAAGACTTTTACCGATGTTAATAATAGTGATGGAGTGA
AATTAGTTATTCGGCGCTTGTTATCATACAACACACCAATCGCATGTTTA
AATATTGTGACAATTACTTTGTACGTCAGAACTATCATCAATATGATAAA
CGATTTGAACATAAAAAACATTGGTTTTCTTACAGTATGCTATCCATCAT
ATAATGAGGATGAAAAGTATCTCATTTCTTTGGTATCAGGTGAGGAATGC
GAGACAGAGATCAGAATCGAACAATATACACCATATCTCATTTGCGAACA
AGGAAAACTTACTTTTGAGTGTCTTCCTTCTTTATTGAAGGAAATACCAG
AAGATTTGTTACAAAAGTCAACTTCGTTTCATGTTGAAATTTGGAACAAA
TTTGTTGAAGAGACAAACGTAATAAACTTTTTACGCCATTTGACGTCATT
CAACAAACCAATCACTATACGGGTGGAGAAGAGGATATCAATGTTTCAAG
CACCTTCTTATGCTGTGGAAAGTGAAATTCGACGGTTGTTGGAGAAACAC
AACATTGATACAAGTAGTATTGAAATAAATGATTATTTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000375_pilon | genome | sc0000375_pilon:105986..107956 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1971:1972 |
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