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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000140_pilon:746512..748687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045106 ID=XLOC_045106|Name=XLOC_045106|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2176bp|location=Sequence derived from alignment at sc0000140_pilon:746512..748687- (Clytia hemisphaerica_ch_hm2_pilon)
TCAGAGGTTGTTGCCATGGCATTGACGATCGCTGCTATAATCACTGCAAT
CCAATTCTGGTTACGACTTGCCACCTTCCTTCATGGACCTCTAAAGTCAT
TTCTACTTCATGTACTCCATAACCTCTCAAATGACCCTTCATACAATGGT
CTACCTCAAGACCCTCAAAAACTATATCAAGCACTCTCGACAGATGCCAA
TCATCAAAAGAAGATAAAGAAGTTGACGAATGGAAAGAACGGAAAAAAGA
AAGTTTTACAACAAGATCAGGTGGACGCATTACTACCTCCTACTGGAAAC
GCAACCGACTCTTCTCAATTTGATGTCACACTCATCTGTATTTTGATTAT
CAATTTTACCGACCTTCCTACTCCTCTCAATGGATGGAGAAACAAAAATC
CACCTGCAACTGACTTAAGTATCGGTGCATTTGTAATTCGTGCAAGAGAA
TGGCGAAATTACATTCACCACACAGATCCAGATAAAATCAATCAAACAGA
ATTTAATCAGAAATGGATAGAAGGAGAGCAAATCATCAACAATCTTGGCT
TTACTTACGACACAACGCAGCTGAAAACAATGTCATTGGACCTAAAGTAC
GAGAATGTTGTCAAATCTTTGTATTTGTATCTAGAGAGAAAGCAAGAAAC
ACTTTCTAAACAACAGACGGCCCTAGCTGATCAACAAACGGCCCTGGTTA
CCAAACAGACGGCCCAAGATACTAAACATACGACCCTAGCAAACAAGCAG
ACAGCCCTTGAGAATCAACAAGCATCATTATCTCAAGATGTTACAGATTT
CCAAATTTCAACAACTCAAAAAATTGATGAACTCGCTCAACAGTTGTCAC
TTCATCAAAATCTCAGTTTGGAGGAAATTAAAGCTTTGACCAAAAGATTG
GAGGAGATTGCCAACGTACAGCAACGCATGTGCAAGAACTTGCCAATGAT
GAAACATCATTCAGGTAAGTTAGGTCCGAATTAGCTTAAATGTTTATAAA
TTATATTTCTACAGGTGAAGAAGCTCTTCCTGTCATTAACGAAACATAAT
TTTACACTAGTCAAGAATCTGACCTAATGTAATATTAGTACTAGTAATCG
TATGGTTTGGAGTGCAATTAACGATTAATCACGAGTAACAAAGGAGAAAA
TAATAATTTACACGAGTCCGAAGGACGAGTGCAAATTATGGTATTTTCTC
CTTTGTTACGAGTGGTTAATCGTTAATTGCACGACAGAACATACGATTCC
GAGGTAATCGTCAGTAAACCATAGATTGAAAATGTGGCATGTTCTTGACT
CATTTTGTTTGTACATTTGAAAAACCTGTCTTTTTTCTTTTGTCTAAAAA
GAAGCTATTGCAGTGCGATATTTTTGTTTTCATTAAAAAAAGTCACTTCA
ATGCAAAATCACTTTGTGTTTTTATAATAAAGAAGTCTCTGTATTGCTAA
ACAGGGCGTGGGAGAGAGGAAACAATAAAGGGAGCAAAATTGCCCCCCGC
CGAAGAGTGCAAAAAGTGGTAATAGTGCAATTAACGATTAATCGCACTCC
TCTAAACCAATCAGATTCGAGTAATTTTGCACGACTGACGATTATAATAT
AAATCCTGCGGTAGTGAGACCCATTCCTAATGCTCATATCTATCAAAATT
TAAACTTTGGGCGAGAATTTAGATCACTTCGAATTTATTAAATTGGATTA
TCGTTTGGGAGGATTTCAGTGGCTTCTAACACTAATCAGCTTTTAAATCC
TAAGATCCTAAGGTCTTAAGTCTCATGTTGAAACTCAGAAGTTACTTAGA
ACACTTAGCAATCATTTGTGGCGTTTAAAAATTAGTTCCACAAAATGCAC
CAATTTAGTAATCTCGCACCGTGAAAATAAGTTCCACCAAAACAAGTCCA
TGATTTGACCTAATATACTTATAAATCGACGTTCATACAGGATCGTGTTG
CTTGGACGAGGTGTTGAAATACATTTCTCAAGAACTGACGGAAGAAGAAT
CCAACACACTTCTCAAACAACTTCGTATTACCGATGACGATTCACAAAGA
AGTTTCTCAGAAAGTTTGGAAGATATCTCATGGCTCGATCTAAAGAGGGA
GCTCCAGATGATGGGGAAATATGAACTCGTTGACCATATCATAAACAAAA
CTTTGATTACTAAAGGTATTAATTGA Coding sequence (CDS) from alignment at sc0000140_pilon:746512..748687- >XLOC_045106 ID=XLOC_045106|Name=XLOC_045106|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2400bp|location=Sequence derived from alignment at sc0000140_pilon:746512..748687- (Clytia hemisphaerica_ch_hm2_pilon)
TCAGAGGTTGTTGCCATGGCATTGACGATCGCTGCTATAATCACTGCAAT
CCAATTCTGGTTACGACTTGCCACCTTCCTTCATGGACCTCTAAAGTCAT
TTCTACTTCATGTACTCCATAACCTCTCAAATGACCCTTCATACAATGGT
CTACCTCAAGACCCTCAAAAACTATATCAAGCACTCTCGACAGATGCCAA
TCATCAAAAGAAGATAAAGAAGTTGACGAATGGAAAGAACGGAAAAAAGA
AAGTTTTACAACAAGATCAGGTGGACGCATTACTACCTCCTACTGGAAAC
GCAACCGACTCTTCTCAATTTGATGTCACACTCATCTGTATTTTGATTAT
CAATTTTACCGACCTTCCTACTCCTCTCAATGGATGGAGAAACAAAAATC
CACCTGCAACTGACTTAAGTATCGGTGCATTTGTAATTCGTGCAAGAGAA
TGGCGAAATTACATTCACCACACAGATCCAGATAAAATCAATCAAACAGA
ATTTAATCAGAAATGGATAGAAGGAGAGCAAATCATCAACAATCTTGGCT
TTACTTACGACACAACGCAGCTGAAAACAATGTCATTGGACCTAAAGTAC
GAGAATGTTGTCAAATCTTTGTATTTGTATCTAGAGAGAAAGCAAGAAAC
ACTTTCTAAACAACAGACGGCCCTAGCTGATCAACAAACGGCCCTGGTTA
CCAAACAGACGGCCCAAGATACTAAACATACGACCCTAGCAAACAAGCAG
ACAGCCCTTGAGAATCAACAAGCATCATTATCTCAAGATGTTACAGATTT
CCAAATTTCAACAACTCAAAAAATTGATGAACTCGCTCAACAGTTGTCAC
TTCATCAAAATCTCAGTTTGGAGGAAATTAAAGCTTTGACCAAAAGATTG
GAGGAGATTGCCAACGTACAGCAACGCATGTGCAAGAACTTGCCAATGAT
GAAACATCATTCAGTCAGAGGTTGTTGCCATGGCATTGACGATCGCTGCT
ATAATCACTGCAATCCAATTCTGGTTACGACTTGCCACCTTCCTTCATGG
ACCTCTAAAGTCATTTCTACTTCATGTACTCCATAACCTCTCAAATGACC
CTTCATACAATGGTCTACCTCAAGACCCTCAAAAACTATATCAAGCACTC
TCGACAGATGCCAATCATCAAAAGAAGATAAAGAAGTTGACGAATGGAAA
GAACGGAAAAAAGAAAGTTTTACAACAAGATCAGGTGGACGCATTACTAC
CTCCTACTGGAAACGCAACCGACTCTTCTCAATTTGATGTCACACTCATC
TGTATTTTGATTATCAATTTTACCGACCTTCCTACTCCTCTCAATGGATG
GAGAAACAAAAATCCACCTGCAACTGACTTAAGTATCGGTGCATTTGTAA
TTCGTGCAAGAGAATGGCGAAATTACATTCACCACACAGATCCAGATAAA
ATCAATCAAACAGAATTTAATCAGAAATGGATAGAAGGAGAGCAAATCAT
CAACAATCTTGGCTTTACTTACGACACAACGCAGCTGAAAACAATGTCAT
TGGACCTAAAGTACGAGAATGTTGTCAAATCTTTGTATTTGTATCTAGAG
AGAAAGCAAGAAACACTTTCTAAACAACAGACGGCCCTAGCTGATCAACA
AACGGCCCTGGTTACCAAACAGACGGCCCAAGATACTAAACATACGACCC
TAGCAAACAAGCAGACAGCCCTTGAGAATCAACAAGCATCATTATCTCAA
GATGTTACAGATTTCCAAATTTCAACAACTCAAAAAATTGATGAACTCGC
TCAACAGTTGTCACTTCATCAAAATCTCAGTTTGGAGGAAATTAAAGCTT
TGACCAAAAGATTGGAGGAGATTGCCAACGTACAGCAACGCATGTGCAAG
AACTTGCCAATGATGAAACATCATTCAGGATCGTGTTGCTTGGACGAGGT
GTTGAAATACATTTCTCAAGAACTGACGGAAGAAGAATCCAACACACTTC
TCAAACAACTTCGTATTACCGATGACGATTCACAAAGAAGTTTCTCAGAA
AGTTTGGAAGATATCTCATGGCTCGATCTAAAGAGGGAGCTCCAGATGAT
GGGGAAATATGAACTCGTTGACCATATCATAAACAAAACTTTGATTACTA
AAGGTATTAATTGAGATCGTGTTGCTTGGACGAGGTGTTGAAATACATTT
CTCAAGAACTGACGGAAGAAGAATCCAACACACTTCTCAAACAACTTCGT
ATTACCGATGACGATTCACAAAGAAGTTTCTCAGAAAGTTTGGAAGATAT
CTCATGGCTCGATCTAAAGAGGGAGCTCCAGATGATGGGGAAATATGAAC
TCGTTGACCATATCATAAACAAAACTTTGATTACTAAAGGTATTAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000140_pilon | genome | sc0000140_pilon:746512..748687 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 967-1200:235 |
| Aaloc | 1-963:2177 |
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