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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000060_pilon:653835..658676+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045089 ID=XLOC_045089|Name=XLOC_045089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4842bp|location=Sequence derived from alignment at sc0000060_pilon:653835..658676+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTATTGGACAATTTGTGTCTTCACTGTAATTGTCAGTTTTGTGGA
TTGTAAGTAGtttttttGCTGAATTGGTCGAATTGGCTTTGTAATTAAAT
ACTAGATTGGATTGAAATGTTGGTTGGTAccaattttccccaaaactgat
TATGGGTTAGCCAAAAATTTGACTGCCAAAACTTAAACGCATTTGTCTCG
GTCTACTCTGcttagaccttttcataaattacatcacggacatcacttgc
ctcgtattcaaacaattaccatggtgattatatctcttgagacattaaat
gattttttttatgaatagaaaggaGTTTTaaaaaaaCCCgttgggagtta
atcaccatggcaatgattttaaaacgaggcaagtgatgtttgtgacgtaa
tttatgaaaaggtccgATAGTGTTATGGTTTGGGTTTTATGAATCTTATT
GTGGCTATAATCCAGACCATCGTAAAAATAAGTATTTACCTCAGTACACA
GAGTGTTATAGTTGGGGTTTTATGAATCTTGTTGGTCACAGCTAGGAAAA
TCAGTAGGGATTTCTAGGCTTTTCTTGTAGGGTTTAGTTTAGTTTACCAA
TCGAGATGAAAtttaaggataattttttcacAGGGACCGACCAAtctttt
ccatcagtttttgaagCTGGGTTCTTTCAGTAGACTAGAAATTAGATCTG
AATTCCATAGCTACATTGTAGAAAAATCAGGATGTTTGAGTTGGTGAAAA
CGCAGTCAATCCGAACATTGGAAGTATTGTTATATAAATAAATACTTCTG
ACCAATTATTCTTCATTTGTTACTTGATCGATAGGTGGTAGAGATTTCTA
CAATATTGCTCACATGTGTAACAATATTGCTACATTGGATTGGGCAGTAC
AGAATGGGGCTAATGCAGTAGAAGCAGACTTACAATTTGATAATCAAGGA
AATCCAACACGTTTTTATCATGGTGCACCTTGTGATTGTACTTGCATGTG
CCCTTTGTAagcataaattattttgttcgCTAAAACaccccctgtgtcac
agacccgctaggaccccagccccactggaaaatttggcaataattttgtc
cccggtgggaaaataccctggaatttcagcccactgagaaattgactttg
atttcatccccactcgaaatccaaagtctaaaaattgcactccaaaacca
tcccactggattttctaactttggaacaatagaatttttatcccactgag
gaaaaaagttccaccggggctgcgagacaggagTGTTTAATACTCGTAGT
TTGAGAAAAAGGAGTGCGGTGGGAGAACAGAAATATAACAACTGATAAAG
ATGTATTAAGACCTGCATGTAAAGATGGTAACATTACCCAAATCTTTAAG
AATCAGGCCCGTAAAGTAAACCGACCAATACTCATTCGTCTAAGTATTTA
GGTTAACTATATTTTAAGGGCAGTCATTACTTTAAAGCTTTAGTAACTTG
GCGTTACTGCTCTAGATTGAGTCTGGATAAAATACTTGTGGTAACTGTAC
ATCCCTAAACCCCAATCcaattttgaaaagctcattacaattaacaatat
tttttatcatcttACCATAGGGGTTTATTCTGCTCGTTCTGGAAAGGATC
GATTTGCCCTTCACtcaaagagaaatttttttggttCGTCAAAAAGTCAC
CGTGTGCTGCAAAGGCGAATGCTGCTAAATGGTTGCAAAGAGCAGGTAAC
TTATTTGTAGTAAGCCAGCTTGaatacaacgttttttcaacgttcatcta
acgttatatggacattatgaacattagaaaaacgttgaaacaacgttgtg
tgtcaaaTGGGAAGCACCATACTTGAATTTAGATTTGTTTTTAATGTTAA
AGTTTTATTGATCAATAATAGgtaaattttcacattttttttatcaaatc
gtACCCCACTTTTCCTCCCCATTGCTCAATATTTAGAATTGACACAAAAG
AATAGATCTTAAAGTGTGGAATGGTCATCGAAAGTTGAAGAGCTCAAGCT
CATAGTGGTAGACAATATATTTCTAAGCTATTTGAACATGTCTAGGTCAA
AGAGTtgcaagaaaaaaagttacaccCCCATCTCACAGCCCCTGTGGAAC
TCTTTTCCTCAGTGGGGGTTGGGGGTCTCAGTGAAGATAAAAGTTCCTAT
TGAAATACCAATTGGGATAtaatttctattgttccaaggctaAATAACTC
AGTGGGATGGGTTTcttaacattgaatttcgagtggggatggaatcaaag
ttaatttctcAGTAGTTGGGCTGAAAATCCAGGGTATGTTCGttcccact
ggggacgaaatctttgccaaattttccagtgggactaTAACACAGGGGTG
TAAAGTTTTTCCCTAATTGAAAATTCTTGGCTTCGTCTCAAAAGGGTAAT
GTTacataaaatcaatcaatcatgatttgattttgtttattttcaggtcg
aaaatattcttcaaagtTAGCCCTTATCTGGTTGGACAATAAAGTGAAAG
GAAAGTCAGAATCAATTCTCAGAAAATCTGGTCAAAAGGTAGCCTTTATT
ATTTCAACACATAGTAATCTAAAGTTTAAAGATTTGAATCTATCCTCCGT
CTTATTTATGGCATTCACAGTAAAAGGAATTTTCTCTGACTGGAGAAACA
TCATCTAAGAAATGAACATACTATCTTAATAAATCTAAGATATACTTTCT
GAGAAAAAGACCAGAACTCTTCGCATGAATCGAGCGAGAAGAGCGCCGTT
ATACTCTTTTGATTTATGTTTtatatcccagctggcacacaacgttattt
taacgttcaaataacgttatttggacgttatgaatgtcacatggacgttg
ttttgacgttgtgtgccggatGGGATCTATCCAGAGGTAACTGAACTTAT
AATGTTCAGTTTTGAGTTACAATACTTTGAAGTTTGATAATTCTCCGTAA
AGGGCCACACTGTCTAATACTTCAATTTCTACTGTATGGATATAACCTCA
GTTGTAATTGTCGATTTATTTAAATAGTCTGCGGTGGCAGATGGCAGAAA
TGTATGTGACGGAAATCTGGTAGAAATCGATCAAGTAGTGGAATCGGGAA
TCTAGGAACCTGCCACTCCCTTCCCGACTGCGATCAACGCTGCagaaatt
ttagataaatttcATTCTATTTTCTTTAGATTGTTAAAGCATTGGATGAA
AATCTATTCAACAACGGATACAGAGGAATAGTAATTCTCGGTGCAGAAGG
AAAACATACAAAGCCTTATTTCGACGAAATCGTTAAATCAAATAGTCCAA
ATCTAAACCGTATCTACCTTACAATGGACTCAGTGAAAATGAGTATAGCT
CGAGCTAAGTTAAATTATCCGAACTTCAAGAATATTCTTTACAACACTGG
TCAGACTGCTTGTTCGCCTTTCCATAAATTGAAACAAGATCATTTGAATG
CTATCAGAACTAACGTTGAAAATGGTATGTTTTGATTCTAATTTCTGTTT
TCCCTGGTTTCTTTCTAAAACACTATTCTTTTTACGCTAAAAATAGGAGA
AATTCTGCctcgtcaaaaagaagaaaggccATGGGAAAGTGAAGGAATTT
TACTGAAACTAATTTAAACACCAAAGACACTTCAAAGGTTTTATCTACTG
CAATAAAAgcttttgactgcattgatgaTTTTTACTTGTACATTCAATAC
AAGAGAAAATATGTCATTAATGTTTCGACAAAAGGAATGAATACGTATGG
GTGGTGCAGTaacggtcggggttgtggatggtgaaatttgttgttctttt
tgaaatttgtcctTCTTTTTTGATATTGTGAAGTAGGCACTTCTCACCCT
CGGAAGAGTCAGATAACTTGATGGCTTCAATCGAATTGCAGTTAAGATGC
CAGGAAATGAAACAATAATAGCAAATACAAATGGGTCACTTTTAACGAAT
AACGTGGGGAATTCATTTTCTAGGAGTTTTCAGTGGTGCTTTCGCCTGGA
CTTACAATTTGAAGAGCTCGATGAAAAGAGTCCATCCATACTTTGATGGC
ATTATCACCAATATGCCTCCAAAACAGGCGCGCATGATCAATGAAGAAGG
TTAGTAAAATCATTGGTGATTACATATGTTACACAGCATAGTTTTCAGCG
TTTAATTGTAACCATATtcaaacccagctggcacacaacgttgtttcaac
gttaacctaacgttcacaacgtccatataacgttagatgaacgttaaaac
aacgttgtgtgccagggGAATGTTTTTGAGCGGCAGACGGACAACGTTTT
GATGttataagtttttttataagaacaaactttataaaagCAAGTTATCC
GAATTTCTTAaggaaatgaacaaaaatactctcaaaatggTGAGAAGGTC
AATAATATTTTCTCAAAGAGTTAAGCTCGGAGTTGAGAACatctgaaagt
ttcaaaaatcttggatgTTCATAAAACAAACGTGTAATGCACTTTGTTTC
TATCGTTGGGTGTTCCAattggaatattatcaaattttgatcACACTGTC
ATAACTTTAAACCCTCTTTATTTCACGAATATAAGAAGGTGGCAAAGGGG
AGGCAAACACTCAGATGAACCAGTAtctatttattttgttgttttgtagg
TCGCAAATTGGCAGCAGTTGGATCTACTCTACCAGCATCAACTTCATCAC
AAGTTATTGGTGATGATAATGATGAAATGTATCTCCTTGAAGAAGATCCT
CAATATGTTCAagacgaagaagaagatgaagatgattTCTAA Coding sequence (CDS) from alignment at sc0000060_pilon:653835..658676+ >XLOC_045089 ID=XLOC_045089|Name=XLOC_045089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2010bp|location=Sequence derived from alignment at sc0000060_pilon:653835..658676+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTATTGGACAATTTGTGTCTTCACTGTAATTGTCAGTTTTGTGGA
TTATGAAGTATTGGACAATTTGTGTCTTCACTGTAATTGTCAGTTTTGTG
GATTGTGGTAGAGATTTCTACAATATTGCTCACATGTGTAACAATATTGC
TACATTGGATTGGGCAGTACAGAATGGGGCTAATGCAGTAGAAGCAGACT
TACAATTTGATAATCAAGGAAATCCAACACGTTTTTATCATGGTGCACCT
TGTGATTGTACTTGCATGTGCCCTTTGTGGTAGAGATTTCTACAATATTG
CTCACATGTGTAACAATATTGCTACATTGGATTGGGCAGTACAGAATGGG
GCTAATGCAGTAGAAGCAGACTTACAATTTGATAATCAAGGAAATCCAAC
ACGTTTTTATCATGGTGCACCTTGTGATTGTACTTGCATGTGCCCTTTGG
GTTTATTCTGCTCGTTCTGGAAAGGATCGATTTGCCCTTCACtcaaagag
aaatttttttggttCGTCAAAAAGTCACCGTGTGCTGCAAAGGCGAATGC
TGCTAAATGGTTGCAAAGAGCAGGGGTTTATTCTGCTCGTTCTGGAAAGG
ATCGATTTGCCCTTCACtcaaagagaaatttttttggttCGTCAAAAAGT
CACCGTGTGCTGCAAAGGCGAATGCTGCTAAATGGTTGCAAAGAGCAGgt
cgaaaatattcttcaaagtTAGCCCTTATCTGGTTGGACAATAAAGTGAA
AGGAAAGTCAGAATCAATTCTCAGAAAATCTGGTCAAAAGgtcgaaaata
ttcttcaaagtTAGCCCTTATCTGGTTGGACAATAAAGTGAAAGGAAAGT
CAGAATCAATTCTCAGAAAATCTGGTCAAAAGATTGTTAAAGCATTGGAT
GAAAATCTATTCAACAACGGATACAGAGGAATAGTAATTCTCGGTGCAGA
AGGAAAACATACAAAGCCTTATTTCGACGAAATCGTTAAATCAAATAGTC
CAAATCTAAACCGTATCTACCTTACAATGGACTCAGTGAAAATGAGTATA
GCTCGAGCTAAGTTAAATTATCCGAACTTCAAGAATATTCTTTACAACAC
TGGTCAGACTGCTTGTTCGCCTTTCCATAAATTGAAACAAGATCATTTGA
ATGCTATCAGAACTAACGTTGAAAATGATTGTTAAAGCATTGGATGAAAA
TCTATTCAACAACGGATACAGAGGAATAGTAATTCTCGGTGCAGAAGGAA
AACATACAAAGCCTTATTTCGACGAAATCGTTAAATCAAATAGTCCAAAT
CTAAACCGTATCTACCTTACAATGGACTCAGTGAAAATGAGTATAGCTCG
AGCTAAGTTAAATTATCCGAACTTCAAGAATATTCTTTACAACACTGGTC
AGACTGCTTGTTCGCCTTTCCATAAATTGAAACAAGATCATTTGAATGCT
ATCAGAACTAACGTTGAAAATGGAGTTTTCAGTGGTGCTTTCGCCTGGAC
TTACAATTTGAAGAGCTCGATGAAAAGAGTCCATCCATACTTTGATGGCA
TTATCACCAATATGCCTCCAAAACAGGCGCGCATGATCAATGAAGAAGGA
GTTTTCAGTGGTGCTTTCGCCTGGACTTACAATTTGAAGAGCTCGATGAA
AAGAGTCCATCCATACTTTGATGGCATTATCACCAATATGCCTCCAAAAC
AGGCGCGCATGATCAATGAAGAAGgTCGCAAATTGGCAGCAGTTGGATCT
ACTCTACCAGCATCAACTTCATCACAAGTTATTGGTGATGATAATGATGA
AATGTATCTCCTTGAAGAAGATCCTCAATATGTTCAagacgaagaagaag
atgaagatgattTCTAAgTCGCAAATTGGCAGCAGTTGGATCTACTCTAC
CAGCATCAACTTCATCACAAGTTATTGGTGATGATAATGATGAAATGTAT
CTCCTTGAAGAAGATCCTCAATATGTTCAagacgaagaagaagatgaaga
tgattTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000060_pilon | genome | sc0000060_pilon:653835..658676 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 865-1005:4702 |
| Aaloc | 739-861:4026 |
| Aaloc | 442-735:3230 |
| Aaloc | 352-441:2499 |
| Aaloc | 226-348:1622 |
| Aaloc | 55-222:837 |
| Aaloc | 1-51:1 |
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