|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000060_pilon:897557..901939+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045079 ID=XLOC_045079|Name=XLOC_045079|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4383bp|location=Sequence derived from alignment at sc0000060_pilon:897557..901939+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatttgaaatttataggAATAGACTTGAcatttttatttatgatatt
gTATTCGACTGCAAAGTCAGTTAATGGTTCTGAAGAAAGTCAAATTTACA
CGGATTTCCTAGCCTTAAAGGTTCAAGGTGGACATGAGAATGCAAGGCAA
ATAGCTCAAGATTCTGGATTATATTATCATGGCCAAGTTGGAAGTTTGGA
TGATTGGTATATATTTAAACAGGTACCACCAACAGAAGGACAACATCGTA
GAGTAAGACGAAGCATTTTGAATGAGATTGTAGGAAAGCTATCGTCGTTT
AAGAATGTTGATTTTGTGGATTCTCAAATCTTGCTGAAACGCAGTCGAAG
GGATTTGGTATTTGACGATCCGTTGTATTCTCACCAATGGAATCTACATG
GAAAATACAGCTCGACAGGTATGTGATTTAAAAGCTTTTGACACTCCTGT
CTCAATGCACTGCACCAACGATAACGTTCTAGCTACAGTCATGGTCGtaa
taattgagaaaaaagggaaattcatacgaaatcttataaccacaaacaat
ttggaaacgCTCTAAATTAGgatggaagggtagagttttaactctgagtt
ttaacaatAGACTTGAGACTTCAGGATCTAAGGatatccaaaagttcaag
aatggtccaatagggctcagaatatagcctggaagtctatacccctccca
aattgaaatactcgaataaatttatcaattagcccaaaagcgactttctc
gcccgaactccaaaccaaatttcgaaaataacAAGGGAATAAGCTAAATc
ctcaatagattttgaccatatGATGTATCATGCTGTCACAATGGATGATA
AATAAGCCATTAGTAATATCAAAGGTAAAATCCTTTGCTAACCAACGGGG
TTGTGGAAGAGGGCTCGAAACACAGTAACCACTTGGatataaagtaaaaa
ttttagtaattttccTTATATTGAACAagattaaaatgtcaaattatTTC
CTAAGCCAAACTTTCTAAAAATACCGATCTCTTTTCCTAATTTTTCTTTG
GAAACAAAACCAAGAGGTTCTTTGACAGGCACTTTGGCTATCAAAACAtg
gcaatatttttcttttgatggcTATGTTATCTGTATAAATCATAtcgcaa
aaaatcacaaaattctaTCAAAGAAAAACTTAATATCATCAGAGTCTCGG
TAGTGAAGAAAAATGCTACCTCGACAATCATGAAAAGCCAAAACAACGGC
CTCAAACTATCTTTAAACTTACGTAACTCTTACATTTTTTGTAACCCttg
ttttaagggctctggtcatagtgaaaaatcaattttagaatttgaagata
aaacctcatgttttcgcttctttgacatgcttaagaacaaactgcttttg
aaaaaatgattttaagtaattacatcatgagtaaaataaggaataagtgt
ggcatggaccttgataaaacgtcataacgacgctattcgtatacttttca
caaaaaaagcctaatctccttggggaaatcattttattgtttcaaacttt
tttaaagttaatgacaaataatttctttatttagattttttcggaaaaat
tttctatttggctacatcccaagttatagctgttttcgtatggaaattta
gtggtaaaattaccaaaaatgaggttttttggagattttaaaggaaagat
acttccacaaaaattttccgaaattacatttttagatactaaatagatac
atcatcTGAACCAAGAAAAATTCCGAAATgattgatttttaccgagatta
gggctttgaaaggtgaaatactcttcttcgaaaaactcttcgttttctcc
ttcatttaatttttttatttcaatttttcgatttttaaattctaaatagg
taggtttaacaggacatatgaaaaaaattatacattaatctttttaaaat
gcagaaattaccatttaagttggtgtaaaatcgaaaaattgggtatgtcc
agagccctttATGCTCCAATATGGCGTTAGAATAAACTCCGCCACCAGGC
GGAAAAAATTTTCGTTGGGTTGAGAAAAACAACCTTTTGCAAGGTTAAAG
GCTAGTCTGGAGTCGCTCATTATCCATTTAATACAACTTATAGAAAATCC
AAAACTTGTAGTTGCAGTTTTTCAAATGGTAATGCCCGCTGTTTTCCACG
AGTAAGGATTTCCCGATGGGTTTCAACGGCGAATAATCAGTATTTCTATT
TCATTGCAGATACGTGTACTTATAACATCAACGTAACAACTTTGTGGCGA
CAAAATATCACCGGTAAAAACGTCGTCGTCACTGTTGTTGATGATGGAGT
TGAACACCGACATAAAGACATCGTCGGCAACTACGACGCCGACGCAAGTT
TTGATTACAACAGTAACGACAAAGATCCGACACCACGACCGACGAGTAAT
AACATCAATAAGCATGGCACAAGGTGAGATCTTCGTTAAATCACAAGGAA
TGGGTGTTTTGTTGATGGTCTTATGGCTAGagtcagaattttgaaaatat
gaaaaacccAAAGACCTTCTCTTAGTctttaataaaacaaatttagcTTT
ACCCTGTACCAATCTCTTCTTTTCTGAAAAGATAACGCGGAGTAAGACAA
AAACGGCaaaatttttaacaatattAGAAAATCGCCAGTGCGATGGGAAG
AAGCTATAACTGTTATTTTATGCTCGTCTCCGTGTAACCCAGGCTTTATT
TTCGTCTCTGAaagacgccagagaatatttagcgctatcagtaagcataa
aaaagatgGTCATACACCTAATGGAACAAGGTTGCTATTAGAcgcaattt
ttaagttttatattcaattcaatttaggTGTGCTGGACAAATTGCTGGCT
CTGCCAATAACTCTGTTTGTGGTATTGGTGTCGCTTACAACGCTAAAATT
GGTGGTATTCGAATGTTCGACGGCCCTTATGTTGACTCTATTGAAGCAGC
CTCGTTTTCATTCAAACCACAACACATAGATATTTACAGTGTTTCATGGG
GGCCCGATGATAATGGAAGAACAGTAGATGGCCCACGTCACTTAGCAACC
AAAGCTATCAAAAATGGTGAGAATATTTTAGCATTTGTCCATGTTAGTTC
CCTGTTAAATATTATGTGGCTGTTATGTGAAAAACATCAACTTTTCTTGG
ACTTCTTAGAATATTAAGTAGTTGGCACTGTTCAAAGCATCGAGAGAAGA
GAACTTGAACCATTCAAAATATCGACAGTGGTTTTTTAATGAGGTTCCAG
GCGAACAGATACAGTCCCATTTCACACCCAAAGCCACTCGCACCACATTA
AATCGTGAGCGCTATCAAAATCATAAGAAAAATAGTGCCTAAGGACTCAG
TTTGAGTTGGGCTGCAATCAATTGAAAGATCATATATTtcacaataaata
ttttttcctgtgttaaCTCACTCTCTGCAAGGAGCTTAATCCAAATCAAC
GATTTACATATCAATCATTTTCTACAGGAATTGAATCGGGAAGAGGTGGG
TTAGGATCAATTTACGTTTTCGCAACTGGGAACGGTGGCAAGAACAAAGA
TCATTGTGGATGTGATGGTTTCGTTAGTATGGTTGAAACCATGGCAATTA
GTTCTGTTGATTATTGTGGAAATATTCCGTTCTATGCAGAGAGGTTGGTT
TTTATTCTTTCGTATTCCGGTTTCATTGGTTTTTGTTGTACATTTAATTT
TTAGCGGTCTAGGTAGCCATCCAATCGAACCACCTGcaataaaaaattgt
attaaaCATTACACGAAAACATATAGAACAGTGGAGTCTTCATAACTAga
gcctctataactcgaatgtcttcaaaaaatcaaaacaagggTGTAAACTG
CACGAATAGATCCTatctcacagccccactgggacccttcccactagaaa
aattggccaaaatatcgtcccccgccggtggaaaattatccttcaatttc
tgtccccactgaaaataatcaaataaaacaatcctcactgcaaaacatTA
TGCTGTACTCATGAACTGTACTATATTTCCCATCCCCAGTGAAttatctg
acttaaaaacaaaagaattaaaatccccagtcataaaacatattggaata
tcaattcccattgagtttcagtccgttatttttatccccactggctgtaA
AAATCCTACCAtctctgtgagaaaggggtgtcttAATATCATATTTTACT
TACTGTCAATAGGTGCACAGGTATCATGGCGGTGACATATAGTTCTGGAT
CCAACCCCGATAAGAAAATCACCACAATAGATCTTGGTGGCAAATGTACA
AATTATTTCACCGGAACTTCGGCGTCTGCTCCA Coding sequence (CDS) from alignment at sc0000060_pilon:897557..901939+ >XLOC_045079 ID=XLOC_045079|Name=XLOC_045079|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000060_pilon:897557..901939+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatttgaaatttataggAATAGACTTGAcatttttatttatgatatt
gTATTCGACTGCAAAGTCAGTTAATGGTTCTGAAGAAAGTCAAATTTACA
CGGATTTCCTAGCCTTAAAGGTTCAAGGTGGACATGAGAATGCAAGGCAA
ATAGCTCAAGATTCTGGATTATATTATCATGGCCAAGTTGGAAGTTTGGA
TGATTGGTATATATTTAAACAGGTACCACCAACAGAAGGACAACATCGTA
GAGTAAGACGAAGCATTTTGAATGAGATTGTAGGAAAGCTATCGTCGTTT
AAGAATGTTGATTTTGTGGATTCTCAAATCTTGCTGAAACGCAGTCGAAG
GGATTTGGTATTTGACGATCCGTTGTATTCTCACCAATGGAATCTACATG
GAAAATACAGCTCGACAGatgaatttgaaatttataggAATAGACTTGAc
atttttatttatgatattgTATTCGACTGCAAAGTCAGTTAATGGTTCTG
AAGAAAGTCAAATTTACACGGATTTCCTAGCCTTAAAGGTTCAAGGTGGA
CATGAGAATGCAAGGCAAATAGCTCAAGATTCTGGATTATATTATCATGG
CCAAGTTGGAAGTTTGGATGATTGGTATATATTTAAACAGGTACCACCAA
CAGAAGGACAACATCGTAGAGTAAGACGAAGCATTTTGAATGAGATTGTA
GGAAAGCTATCGTCGTTTAAGAATGTTGATTTTGTGGATTCTCAAATCTT
GCTGAAACGCAGTCGAAGGGATTTGGTATTTGACGATCCGTTGTATTCTC
ACCAATGGAATCTACATGGAAAATACAGCTCGACAGATACGTGTACTTAT
AACATCAACGTAACAACTTTGTGGCGACAAAATATCACCGGTAAAAACGT
CGTCGTCACTGTTGTTGATGATGGAGTTGAACACCGACATAAAGACATCG
TCGGCAACTACGACGCCGACGCAAGTTTTGATTACAACAGTAACGACAAA
GATCCGACACCACGACCGACGAGTAATAACATCAATAAGCATGGCACAAG
ATACGTGTACTTATAACATCAACGTAACAACTTTGTGGCGACAAAATATC
ACCGGTAAAAACGTCGTCGTCACTGTTGTTGATGATGGAGTTGAACACCG
ACATAAAGACATCGTCGGCAACTACGACGCCGACGCAAGTTTTGATTACA
ACAGTAACGACAAAGATCCGACACCACGACCGACGAGTAATAACATCAAT
AAGCATGGCACAAGgTGTGCTGGACAAATTGCTGGCTCTGCCAATAACTC
TGTTTGTGGTATTGGTGTCGCTTACAACGCTAAAATTGGTGGTATTCGAA
TGTTCGACGGCCCTTATGTTGACTCTATTGAAGCAGCCTCGTTTTCATTC
AAACCACAACACATAGATATTTACAGTGTTTCATGGGGGCCCGATGATAA
TGGAAGAACAGTAGATGGCCCACGTCACTTAGCAACCAAAGCTATCAAAA
ATGgTGTGCTGGACAAATTGCTGGCTCTGCCAATAACTCTGTTTGTGGTA
TTGGTGTCGCTTACAACGCTAAAATTGGTGGTATTCGAATGTTCGACGGC
CCTTATGTTGACTCTATTGAAGCAGCCTCGTTTTCATTCAAACCACAACA
CATAGATATTTACAGTGTTTCATGGGGGCCCGATGATAATGGAAGAACAG
TAGATGGCCCACGTCACTTAGCAACCAAAGCTATCAAAAATGGAATTGAA
TCGGGAAGAGGTGGGTTAGGATCAATTTACGTTTTCGCAACTGGGAACGG
TGGCAAGAACAAAGATCATTGTGGATGTGATGGTTTCGTTAGTATGGTTG
AAACCATGGCAATTAGTTCTGTTGATTATTGTGGAAATATTCCGTTCTAT
GCAGAGAGGAATTGAATCGGGAAGAGGTGGGTTAGGATCAATTTACGTTT
TCGCAACTGGGAACGGTGGCAAGAACAAAGATCATTGTGGATGTGATGGT
TTCGTTAGTATGGTTGAAACCATGGCAATTAGTTCTGTTGATTATTGTGG
AAATATTCCGTTCTATGCAGAGAGGTGCACAGGTATCATGGCGGTGACAT
ATAGTTCTGGATCCAACCCCGATAAGAAAATCACCACAATAGATCTTGGT
GGCAAATGTACAAATTATTTCACCGGAACTTCGGCGTCTGCTCCAGTGCA
CAGGTATCATGGCGGTGACATATAGTTCTGGATCCAACCCCGATAAGAAA
ATCACCACAATAGATCTTGGTGGCAAATGTACAAATTATTTCACCGGAAC
TTCGGCGTCTGCTCCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000060_pilon | genome | sc0000060_pilon:897557..901939 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1039-1158:4264 |
| Aaloc | 874-1035:3530 |
| Aaloc | 634-870:2879 |
| Aaloc | 421-630:2262 |
| Aaloc | 1-417:1 |
|
