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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000060_pilon:950573..956267+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045078 ID=XLOC_045078|Name=XLOC_045078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5695bp|location=Sequence derived from alignment at sc0000060_pilon:950573..956267+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTATTGCCGTCTCAAGCCAAGAAGGTAAAAAATTTCGAATACCTTCAAA
GctcattttattttatacacGTGTCAATGATGAGGCAGCAGGTGCTTGAA
TTCAAATTTACCAGGGCAATAATGACGTCTAATGATTATGTCTGTTTGAA
TCTCATTGCGAAAACTTTTATAAATGACCCCCTGCTAAACTTTAGGATCC
AATGCCCTTGGATGTTCCAGCTTATTATTATTACCCCCTGTATGTTTTTT
ACTCTGTAAGACGTATTAAATTGGGAACTTTAGTATAATAAGAATGTAAC
AGAACTTAATTCTTCTAATTATCTAGAACGCCCTGCTGACGTCACAAAAG
GCTACACCAAACCCATTCAATTTTACGAGACGACATCAGTTAGACTTTTC
TGGGAAGCATCGACAAGTActaaagaaaaaacatcaataTCTTATACAGT
GACCTACTGTAGACTAAATTTCCCCGACACGTGTACAACCCTGGAATCGA
CAAATGGTTTGACCCTGGTAttgaaatcattgaataaagACACTTATTAT
CAATATAAAATCCAAGTTCGAGATCAACAGAATCAAACGGGTGCAAAACC
ATACGAAAATTACTTCAGGACAGAACGTAAAAGTAAGTAAAACACGCGAC
CAGAGTTGTTTgcctgaatcgcagacctctttttttttaatcatctaAAA
CGACCTGTTTGGCTCTATGGCTACACCAAACCCACTTATATGAGCAGACC
CAcaaggatgagcagaagcctaggtTGTCGTAAAAAAGAGTTTTACGCGC
GTTTGATATAAATTGATGTCATTCACTTAAATCTGTATTTTCAACGCCTT
GAAGAGACGTTAGTATACACCCCTtcccacagacccactgggaacccttc
ccactggaaaaactggccaaaatatcgtccccaatgaaaaattattattc
taatttttctccctgcaaaatattgtgctatttttttcatccccactgaa
ttttttggctaaaaaataatggaattcaaatccccggctataaaaaatat
gagaatatcaatccccatcgagttttggtccgttatttgcacccccactg
gctgataagacccggtctgtgagaaggaggtgttaGTATAGCTTCAATTC
ATCAGTAGAGTGAGAgggacaaaatttaaaaaaggaaatattgGAAATAT
GAGAGATAACTTGTCACAATACTGACTTTGACCATATTTGATTGTTCAAC
AAAATGTAAATATACAGCCAGCGAGATTTAGCTGGCATTtaggttttaga
aaaaaaaattaagataagaATTATTTCATTAAACATCATCAAACTCAAAT
TCTCCTTAATTTTATAGATTCCTGTCAACCGGGTCATTTTCGTTGTACGG
ACAGTGCACAATGTGTGTTTTCCAACCGGACATGTAATGGTATTCAAGAT
TGTGGTGATGGCAGCGATGAAAGAATCGATGCTGGTTGCTGTGAGTTGAT
ATTGTAGATATTGTCTTTTTAAGATTTGGAAAGGATGCTGACATAGCAAA
ATAAggaaactaatttctcaacattTGTGCTTGTGCGGTGTGTCAAGTAG
AGAAAGTTGTTCGTTCttctgtttaaaaatgctgtgtgaGTAAATGGTAG
gatcacagatatctgtaaagcccgaagggctagatttgcggcttttatca
aaaagtgaagctcatctttggaaggatttcctaccagagtcacgtgacta
aaatatgcaatttcaccggtttgagagatgtgaaatagcgtttgccgcct
acgttttttgatctcgcgctccgaaaacaattaaaatgctagatcctatc
catcggcacgaaatttaaaaagtcaaatttttgcttcacttttttttgct
ggagaaagcttaaagttgcaaatctagcccttcgggcttagatatctgtg
ggtaGGATATCCTTTAAGAGAACTTCTCAACTCTCTTTTACTTAATTGTC
TCATTAACTCGAACGAGTTTTCTGATTCCTTCAGGTAATCGAAAACTTAA
TATCTATTACTATATATAACGTGAACAAATTTCAATTCCCCATTAgtgct
cgagttatggagactctattGTAGGATtgaatagcgcaccgcgctgaatc
taaaaatagattttatttttgacataatcattaatgtcgatgtgtttgta
cgagttccaattccatcaacctttgcgctaatctcttttgcacgttaatt
gcatcgtttgacaaaagatatataacagctCGCACGTATatttaatagac
gatatcggctttcgataaatgcaatgcattctggtttctcgggactctca
aaggaattataatagatgaattataatagattataattcctttgagagtc
cctagaaaccagaatgcattgcatttatcgaaagccgatatcgtctattg
agccgcgttgaattgtgggattgcaactcgtacaaatgtcaaaaaaagtg
aaaagtaataattatgacgtatgcattgcggagcgctattgaaCTGAGGT
TGGAAAAGGGGAAAGAATCGAATTACATAATTGGCAAATTATTTTCTGTT
TATATTTTAGCTGCACCACGTTACGCACCGAAAGATGTTCAATTAGTTGG
TGCTGGGTCTACGGTAGCCGAAATCAAATGGATTTCCGTTCCACAAAGTG
ATCGACCCTACTTATATAACATTCTCATTCAAGGTATAACGACATTCTTA
ACTTCCCTGGTTAAGCTAGTTTTACTTAAAGTTTGGAGCACTTAGCtttt
ttttGGTGCCGTGGAGCTGCACCTTACCGAGTCAAGGGAATCCAATCCTT
AATCAAAAAGTTTGATTCTTTATGTAAAACGATAATTgatcaatttcttc
ttctttcagaTGGAACTGACGATGATCAAACGAAAAATATTCGTACAGGA
TTTGCCGCCATCTTGATTAGTGCTACACTAGACGGGTTATTACCCAATCG
AGAATACACTATCAAGATTCGAGCTGTCAATGTCGTTGGTAGTGGTATCT
ATTCGGATCCACTGAAATTCAAAACCGCCCGATTAGGTAAAtgataataa
caataataatatagTGTAGTCTCTTtaacctccataactcgagtCTGTAC
TGAACGGGAgttatttgatgaagaagtggtggtcccccctcattttggtc
ataaaatCGCTTATAAAATGACACTTCTACATCAAAAAACTCCCATTCAG
TACAGAAATCGGCCATACtcgcttaaaagtcttctatatagtctTCTatt
ggttttggcctaaaataagtttgaaatttccataaaaattggGCCCTTTA
GGCTTTAGCCTAGGTTTTCAATAAATAGGTCAAAATATTAGGGCTACCCT
TAATAAAACTTTTCTGGGCCTCTCTTCTAATATCAATCCACAGGGTACTA
GGCATGTCTGGTccaaatttggtgctttgttccaaatttgcacgataatt
acaccaatcaggccTACTAATAGAATCTTACCTActaacaaaatttcaac
aattatttcaacattcaatattttctttagatttACCTACGCTCGAAATG
CCTAAGAACGCATCAGTTACACCAATCTTATACCAAGAATCAACCAGTAT
CAAATTGTCCTGGTCATCACCAACAGATCTCAAAGGAAACAATCCATCTT
TGATCACCTACCAAGTCAACTATTGTAGTATCAACAAAAAATGTGACAAG
TTTACTGAGAAAGCTAGCAGAACGACAGCACTATTAACTGACCTGCAACG
AAGTCATATTTATCAGTTTACTATTCGcgtttttaatgaaaacatGGAGA
GCGACGATGAGAAATCAACTTACACTAACATATTCAAAACAGTTTCAAAG
GGTAAGGGTTTACATCAGGGAAAGTTATAAAACAACGTAAAAACCAAATT
GAACATAAATATTTAACTTTCCATCGTCCTGGTTTTACCATTAGAATTAA
TATACAATAGGGGACCTTATGGATAGATAAAGAGAGCCGTATTTTATTTA
GATAGCGCAGTATCAATGACTTTTATTAAAGGTAGTCCTTCGATTGTTTT
CAAAAGGTTCACAACCAGCTTACTCGAATACCTATAAACTGAACAGAACA
TTGAATAAAGCTTCCACCCTAAATTTGTAGCGCTGACACGCCTTAGACCA
CCTTAAACCACTCGTATTTCGCCAAAAAGTCCTTAGctgaacttttttta
ttttcacaattaGACACCTGTAGATCGAACTTCTTCACGTGTACACAATC
ACCACAATGTGTTCAACAAGACAGAAAATGTGATGGTCTCATTAATTGTT
CAGATCGCAGTGATGAATCTGAAGCTGCTGGATGTGGTAAGATCACCATT
CGTTTCTTTTTTATACAATGATtcttgaaaattgtcaaaatctAGACTCC
GATAGTGACACTCTGATCGATTTTTAATCTAATGAGGTGCAAAATCACAG
TGGAGCCAAAAATATACTAAGATGTTTAATATTTTCCTTACATTTTGGGC
AGCTTATTTTATTACTAAGCATTAAAAGCCGATAATACGTAGGGAACGAG
GTTGCCAAAATAACAAGAGTGGTGTATTCAATGAGGTCATTGTGAAGTTT
CATGTCAAAGATATTTCCAGAGCTGTTATAGAATTAGAAatttatattct
ttttttctccATAGAATTACCACATTTCTTTGGCAAGATCAGCATCAAAG
ACGTCTCATACAATACAGCAATACTTCAATTCGAACCTAGCCGGGATCCA
AAGCAAAGAATCAGAGGCTACGAAATCGAAAACATGGTTACAAAAGAAAC
ACAGCTCATTCGTCATTCAACATTATCTCACGAAAGAATCATCAAAGTCA
CCTTTGTTGGTTTAAAGCCCTTGACACATTATGAATTCCGTGTTCGCGCT
GTGAATCCAACGGGTACAGGGCTTTGGTCACCTCCTTCGAAGACTAGAAC
AACAGgtattaatatttcttttcaacaaattttactCTGTGCTCTATTTT
TAACACTACCATGAGTTTTTTAAGATCCACTACTTGCTGATATAAGTTTT
TTAAGACTCTGTAAGACTTTACACCAAAATCTTTGAGAGCTTTCCTCCCA
GGACCTCCTTTGTGATGACTCATAAGAGCCGTCCTTTGAAAGGACTAATT
TTAGTGAGAattaattttagcaattttggTGAGTTTTGAAGAAGTCTGCG
CCTAAATTGGTTCtcgctaaaattgaaaaaattgcttcctcgcaaaatgt
tagttctctctcaaaattaaaaaaagcgtcAATCTCTAAAGTTTCACCTc
gccaaatttataaagaatcAATCAGAGAGGGTAGCCGTATAacccaaaat
caatttaaatttttcagctAAGCCAACACCCAAACCTACCACAACTGACC
CTAGATCTGGCGATACTACGACTTCAACACGGCGTCCAAAACCAACTATG
GAGCCAGCGGAGAGTTCATCAGGTCTTTCGAATAACGAGAAAGTTGGTGT
TGCAGTGGCAATTATTCTTGCTGTTTTGTTGGTGATCATAACTGTGGTAA
TTGTAACCAGAGACAAGTCAAAGAATGGTAAAAAACCAGAATATACTGTA
AAGCAAGGTGTATCTAATCCAAGTTACGTCGAAGGAGAAGTTTGA Coding sequence (CDS) from alignment at sc0000060_pilon:950573..956267+ >XLOC_045078 ID=XLOC_045078|Name=XLOC_045078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3534bp|location=Sequence derived from alignment at sc0000060_pilon:950573..956267+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTATTGCCGTCTCAAGCCAAGAAGATTATTGCCGTCTCAAGCCAAGAAG
AACGCCCTGCTGACGTCACAAAAGGCTACACCAAACCCATTCAATTTTAC
GAGACGACATCAGTTAGACTTTTCTGGGAAGCATCGACAAGTActaaaga
aaaaacatcaataTCTTATACAGTGACCTACTGTAGACTAAATTTCCCCG
ACACGTGTACAACCCTGGAATCGACAAATGGTTTGACCCTGGTAttgaaa
tcattgaataaagACACTTATTATCAATATAAAATCCAAGTTCGAGATCA
ACAGAATCAAACGGGTGCAAAACCATACGAAAATTACTTCAGGACAGAAC
GTAAAAAACGCCCTGCTGACGTCACAAAAGGCTACACCAAACCCATTCAA
TTTTACGAGACGACATCAGTTAGACTTTTCTGGGAAGCATCGACAAGTAc
taaagaaaaaacatcaataTCTTATACAGTGACCTACTGTAGACTAAATT
TCCCCGACACGTGTACAACCCTGGAATCGACAAATGGTTTGACCCTGGTA
ttgaaatcattgaataaagACACTTATTATCAATATAAAATCCAAGTTCG
AGATCAACAGAATCAAACGGGTGCAAAACCATACGAAAATTACTTCAGGA
CAGAACGTAAAAATTCCTGTCAACCGGGTCATTTTCGTTGTACGGACAGT
GCACAATGTGTGTTTTCCAACCGGACATGTAATGGTATTCAAGATTGTGG
TGATGGCAGCGATGAAAGAATCGATGCTGGTTGCTATTCCTGTCAACCGG
GTCATTTTCGTTGTACGGACAGTGCACAATGTGTGTTTTCCAACCGGACA
TGTAATGGTATTCAAGATTGTGGTGATGGCAGCGATGAAAGAATCGATGC
TGGTTGCTCTGCACCACGTTACGCACCGAAAGATGTTCAATTAGTTGGTG
CTGGGTCTACGGTAGCCGAAATCAAATGGATTTCCGTTCCACAAAGTGAT
CGACCCTACTTATATAACATTCTCATTCAAGCTGCACCACGTTACGCACC
GAAAGATGTTCAATTAGTTGGTGCTGGGTCTACGGTAGCCGAAATCAAAT
GGATTTCCGTTCCACAAAGTGATCGACCCTACTTATATAACATTCTCATT
CAAGaTGGAACTGACGATGATCAAACGAAAAATATTCGTACAGGATTTGC
CGCCATCTTGATTAGTGCTACACTAGACGGGTTATTACCCAATCGAGAAT
ACACTATCAAGATTCGAGCTGTCAATGTCGTTGGTAGTGGTATCTATTCG
GATCCACTGAAATTCAAAACCGCCCGATTAGaTGGAACTGACGATGATCA
AACGAAAAATATTCGTACAGGATTTGCCGCCATCTTGATTAGTGCTACAC
TAGACGGGTTATTACCCAATCGAGAATACACTATCAAGATTCGAGCTGTC
AATGTCGTTGGTAGTGGTATCTATTCGGATCCACTGAAATTCAAAACCGC
CCGATTAGatttACCTACGCTCGAAATGCCTAAGAACGCATCAGTTACAC
CAATCTTATACCAAGAATCAACCAGTATCAAATTGTCCTGGTCATCACCA
ACAGATCTCAAAGGAAACAATCCATCTTTGATCACCTACCAAGTCAACTA
TTGTAGTATCAACAAAAAATGTGACAAGTTTACTGAGAAAGCTAGCAGAA
CGACAGCACTATTAACTGACCTGCAACGAAGTCATATTTATCAGTTTACT
ATTCGcgtttttaatgaaaacatGGAGAGCGACGATGAGAAATCAACTTA
CACTAACATATTCAAAACAGTTTCAAAGGatttACCTACGCTCGAAATGC
CTAAGAACGCATCAGTTACACCAATCTTATACCAAGAATCAACCAGTATC
AAATTGTCCTGGTCATCACCAACAGATCTCAAAGGAAACAATCCATCTTT
GATCACCTACCAAGTCAACTATTGTAGTATCAACAAAAAATGTGACAAGT
TTACTGAGAAAGCTAGCAGAACGACAGCACTATTAACTGACCTGCAACGA
AGTCATATTTATCAGTTTACTATTCGcgtttttaatgaaaacatGGAGAG
CGACGATGAGAAATCAACTTACACTAACATATTCAAAACAGTTTCAAAGG
ACACCTGTAGATCGAACTTCTTCACGTGTACACAATCACCACAATGTGTT
CAACAAGACAGAAAATGTGATGGTCTCATTAATTGTTCAGATCGCAGTGA
TGAATCTGAAGCTGCTGGATGTGACACCTGTAGATCGAACTTCTTCACGT
GTACACAATCACCACAATGTGTTCAACAAGACAGAAAATGTGATGGTCTC
ATTAATTGTTCAGATCGCAGTGATGAATCTGAAGCTGCTGGATGTGAATT
ACCACATTTCTTTGGCAAGATCAGCATCAAAGACGTCTCATACAATACAG
CAATACTTCAATTCGAACCTAGCCGGGATCCAAAGCAAAGAATCAGAGGC
TACGAAATCGAAAACATGGTTACAAAAGAAACACAGCTCATTCGTCATTC
AACATTATCTCACGAAAGAATCATCAAAGTCACCTTTGTTGGTTTAAAGC
CCTTGACACATTATGAATTCCGTGTTCGCGCTGTGAATCCAACGGGTACA
GGGCTTTGGTCACCTCCTTCGAAGACTAGAACAACAGAATTACCACATTT
CTTTGGCAAGATCAGCATCAAAGACGTCTCATACAATACAGCAATACTTC
AATTCGAACCTAGCCGGGATCCAAAGCAAAGAATCAGAGGCTACGAAATC
GAAAACATGGTTACAAAAGAAACACAGCTCATTCGTCATTCAACATTATC
TCACGAAAGAATCATCAAAGTCACCTTTGTTGGTTTAAAGCCCTTGACAC
ATTATGAATTCCGTGTTCGCGCTGTGAATCCAACGGGTACAGGGCTTTGG
TCACCTCCTTCGAAGACTAGAACAACAGctAAGCCAACACCCAAACCTAC
CACAACTGACCCTAGATCTGGCGATACTACGACTTCAACACGGCGTCCAA
AACCAACTATGGAGCCAGCGGAGAGTTCATCAGGTCTTTCGAATAACGAG
AAAGTTGGTGTTGCAGTGGCAATTATTCTTGCTGTTTTGTTGGTGATCAT
AACTGTGGTAATTGTAACCAGAGACAAGTCAAAGAATGGTAAAAAACCAG
AATATACTGTAAAGCAAGGTGTATCTAATCCAAGTTACGTCGAAGGAGAA
GTTTGActAAGCCAACACCCAAACCTACCACAACTGACCCTAGATCTGGC
GATACTACGACTTCAACACGGCGTCCAAAACCAACTATGGAGCCAGCGGA
GAGTTCATCAGGTCTTTCGAATAACGAGAAAGTTGGTGTTGCAGTGGCAA
TTATTCTTGCTGTTTTGTTGGTGATCATAACTGTGGTAATTGTAACCAGA
GACAAGTCAAAGAATGGTAAAAAACCAGAATATACTGTAAAGCAAGGTGT
ATCTAATCCAAGTTACGTCGAAGGAGAAGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000060_pilon | genome | sc0000060_pilon:950573..956267 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1492-1767:5420 |
| Aaloc | 1201-1488:4717 |
| Aaloc | 1078-1197:4266 |
| Aaloc | 757-1074:3583 |
| Aaloc | 580-753:2912 |
| Aaloc | 457-576:2613 |
| Aaloc | 334-453:1370 |
| Aaloc | 28-330:329 |
| Aaloc | 1-24:1 |
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