XLOC_045042 (mRNA) -

Overview
NameXLOC_045042
Unique NameXLOC_045042
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:1188391..1189034+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045042 ID=XLOC_045042|Name=XLOC_045042|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=644bp|location=Sequence derived from alignment at sc0000083_pilon:1188391..1189034+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACTGTCCCAGCTGCGGCAGAAGAACTTTGCGAGACACATGAATA TGCTGCGGTCACTAAACAAGTCAGCATATGATCGTATTTTGAACAAATTA CATCCTCTTTATGTACAAGCTGGTGAGGAAGGCATGGCAAAAGCAGCTGC TAATATTTCAACTGATCACAATGATAACAATAACCAAGGTCCAAAAGATA TCGTCACTTCATTTAATGGATCGTGGCAGCGCCGTGGTTACGCATCGCTG AATGGAATTGTTTCGTGTATAGAGCGAACAAATGACAAAATAGTTGATGT CGAAGTGAAAACTAAGAAATGCAATTCATGTCAGTTCTgggaaaaaaaga aaggaacaaaaaaTTATGATGATTGGAAGAAAACTCATGTTTGTAATGTC AACCATGAAGGGTCAGCTGCCGCAATGGAAACAAGTGGAACTTTAACCAT CTACAAACGATCCATCGAAAAGAGGAATTTAAGATACACAACCTACCTAG GAGATCATGACTCAAAATCCCACCCCAATATTGTTGAGGCAGACCCATAC AAGGACACTACTGTTAAAAGAAGGAGAATGTATTGGACATGTGCAGAAAA GGGTTGGGTCGAACCTCCGAAGAGTCCGAAAGGAAAGCCCGAAG

Coding sequence (CDS) from alignment at sc0000083_pilon:1188391..1189034+

>XLOC_045042 ID=XLOC_045042|Name=XLOC_045042|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1228bp|location=Sequence derived from alignment at sc0000083_pilon:1188391..1189034+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACTGTCCCAGCTGCGGCAGAAGAACTTTGCGAGACACATGAATA
TGCTGCGGTCACTAAACAAGTCAGCATATGATCGTATTTTGAACAAATTA
CATCCTCTTTATGTACAAGCTGGTGAGGAAGGCATGGCAAAAGCAGCTGC
TAATATTTCAACTGATCACAATGATAACAATAACCAAGGTCCAAAAGATA
TCGTCACTTCATTTAATGGATCGTGGCAGCGCCGTGGTTACGCATCGCTG
AATGGAATTGTTTCGTGTATAGAGCGAACAAATGACAAAATAGTTGATGT
CGAAGTGAAAACTAAGAAATGCAATTCATATGAAAACTGTCCCAGCTGCG
GCAGAAGAACTTTGCGAGACACATGAATATGCTGCGGTCACTAAACAAGT
CAGCATATGATCGTATTTTGAACAAATTACATCCTCTTTATGTACAAGCT
GGTGAGGAAGGCATGGCAAAAGCAGCTGCTAATATTTCAACTGATCACAA
TGATAACAATAACCAAGGTCCAAAAGATATCGTCACTTCATTTAATGGAT
CGTGGCAGCGCCGTGGTTACGCATCGCTGAATGGAATTGTTTCGTGTATA
GAGCGAACAAATGACAAAATAGTTGATGTCGAAGTGAAAACTAAGAAATG
CAATTCATaaaaTTATGATGATTGGAAGAAAACTCATGTTTGTAATGTCA
ACCATGAAGGGTCAGCTGCCGCAATGGAAACAAGTGGAACTTTAACCATC
TACAAACGATCCATCGAAAAGAGGAATTTAAGATACACAACCTACCTAGG
AGATCATGACTCAAAATCCCACCCCAATATTGTTGAGGCAGACCCATACA
AGGACACTACTGTTAAAAGAAGGAGAATGTATTGGACATGTGCAGAAAAG
GGTTGGGTCGAACCTCCGAAGAGTCCGAAAGGAAAGCCCGAAGaaaaTTA
TGATGATTGGAAGAAAACTCATGTTTGTAATGTCAACCATGAAGGGTCAG
CTGCCGCAATGGAAACAAGTGGAACTTTAACCATCTACAAACGATCCATC
GAAAAGAGGAATTTAAGATACACAACCTACCTAGGAGATCATGACTCAAA
ATCCCACCCCAATATTGTTGAGGCAGACCCATACAAGGACACTACTGTTA
AAAGAAGGAGAATGTATTGGACATGTGCAGAAAAGGGTTGGGTCGAACCT
CCGAAGAGTCCGAAAGGAAAGCCCGAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_045042XLOC_045042-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:1188391..1189034 +
Properties
Property NameValue
Aaloc529-612:561
Aaloc328-525:362
Aaloc61-324:65
Aaloc1-60:1