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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000391_pilon:78776..82101- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045035 ID=XLOC_045035|Name=XLOC_045035|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3326bp|location=Sequence derived from alignment at sc0000391_pilon:78776..82101- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTACCAACAACAACACGTTCGTGGACCAAGTCATTTCTCTCTTCAC
ACGTGATATTTATCTCGATCAGCCAAACTTTCGATCACTACTACAAGCAT
TAAATAAGTTGGGTAATCAAGACCTTGTTCTAGCGTATCCAATCAAGTTG
TTAAACAAACGTGCTAAAGAGGATCCAGTGGGTTGGGATACAATGTTGTT
TGCCTTTAAATGTCCAAATGACGTCACTGCAGATGTGTTGAGCGCTCAAA
ATGAAACTGCAAGCAAAGTGCTCGGTAAGTCGTCATTTCATATTTTGTTA
GTTTGCCAACATAGAAGAACATTTTCGAATCCGTAAAGGTTTGCTTCCAT
AATGGCGGAAGCCACGTAAGTTAACAAAACATGAAAAAAGTCTTGCGTTT
CAGTTGATATCACCAAGGATAATTTTTTCAGTTATAATTTTATTTGAAGG
TTTTAAAGATGAGGTCTACATCATTTCATAAGTGACGGGAGTCAGAGGTA
ATCTGAACCACCGCGCTATGATAACAATTTTCTATTGACCTAAGATTATT
GGATGTTTTCGCTTTTAACCAACGGGAAGATGTTTTAGAAGGACTGAGGC
GTTATCAGTCCTGATTACTCATGATTCATTTCGACCGTGAAACATAGATT
TATAAAGCCTGAAGGGCTAGATGTCGTGCTATGGCTGAAAAGTGTGCGGA
GGTTAAGTAGGAAATCCTACCTAGGCCACGTGACATTACAATAGAATTTC
AGCGCTTGACCAATAAGAAGCTTCGCGGGATATTTTTTGCGATATATTAA
CTTTTTTTTGCTTGGAAGAGCTTAGAGCACGACATCAAGCCATTCGGGCT
TTAAAGAAATCTGTGCCATGAAATGCCCTCTTAAAGGAGGAGATTAAGGG
GGAGTGAGGACAGTTTGGGGCAAGTGACGAAGGTTTTCCTGGTCAAACAC
ATTTCTAATCAACTTCAAGCAGGGATCTATGATAGAGATTTTTTACAAAA
GTGACAAAGATTTGTCCTACTTTAATTTTACTCGACTAAGTTCTCCCCGT
TAAAATATTGGGGATCTCCACACAACAGACATGCCACAACCAGCACTAAA
AGTTTTCTTGAAACAGTGCTCTCAAAAACTAGGGATTGTAACCGCCTCGT
ATGACCAATTTATTTGATAAAGTTGGCTACATACTCTATTTAGTTATCTT
GCTGGGATTTCACGTGTTGATCGTCTAAGATAAGATTTGAATCAGCGATC
AATGGTTGAATGGCATTTTCTTTTATAGAAGATGATTTGACAGCAATGAA
CAAGGAAAAGAAGCTAGATTCAACAAGCGAAGTAAAAAGCAAGAGAAAGT
CTTCGTTGCCAGATAGCACCAACAGTGAAGCCAAGAAAGATGTTTCAAAA
CAAACGCCAGCTTTCAAAGATAACAACGAGGTTCTTGAAAGCACAGCTGA
GATGAAGACTGATTCAAACAAATCTCGGAGAAAAAGCTCAGCACAGATGA
CTGAAGAGATTTTGGCAAGTCTGGAAATCCTTGAACAACCTCTGGTTATG
GATGGTAGCAACAATAGCTGCACCAAACTTATCAGTGATGTGGAAGAGCT
AAAGGTTGCAGTTGAAGAGGAAAGTATTGCTGCCGAAGCTGAGAATGTAC
AGCTTGAACAAGGTGTATCCCTTATTGAGGATACTGCTGACATTGGATCA
AAGTCAAATCACAATATCAAGAACGCATCTACCAAGGGTGAATCTTCTTC
ACCAAAGGAAGATTACCAAAATGACGATGTCGGCGTTATAGCTGATTCGA
AAGACCTTGAAGATCCTAAGGACACTTCTACCAATGAAGAAAATACTGAT
TACAAATCAAAGGCGATGAATAATGACATAGAATCTATGAGTGAGATTGC
TCAAACTGCGATGGCTGGTTGTGAGCTGACAGACACTAACAACTTAGAGA
AACCTAGTGTCCAAACAACCAAATCTGACATCGATTCCACCATAGATGTT
GGAGATGGTCTTTCGATAGCAAATGATCAAATTGATGCCAATGGTAAAGT
AGAGGAAATCGATGATTCATTTGGTGTGCAAAATGATAAAGCTGGTGAGA
CTACTAGTCCAATTGCAAACGCCGATGTCAACAACGAAAAAGTCGTAAAA
ATTGCTGAGAATGCTGAAGTTGGTGTCTCTACCGGTGACAGAACTTGCCC
CAAGGTATCTGAAAATGTTGATGTCAACCTGTCGGGGGAAGAAACTGAAA
TTCTCAAGAACGTTGATGAAGACGAGGATGATTGGTATGGATCACAGTCT
ACCAACATCACCAGTGATGACGACAATGATTTGACCGAAGATGGTGGATT
GCAATTATCATCCTTTGGTGATGACCGTAGACGGAGCAGTAATTTGAAAT
ATGCTGGTGTACCCTTGCTGGAGACTATCCAAGAGAATGGAGAACACAGT
GTTTCTAAAGAGAATCTCCAAGTGGAGGATGAGATAGTCAACAGGGAATG
CAATGAGAATAAGAATGCTGACAATGACACTGTCCATAGAAGAAACAATG
CACCTAACGAGAATCTTTCAGGTGTTGAGAATGGAAACCAAGGAGAAGAC
AGTGATCGCAAATTTACCAAAGAGAGTATTAACGTTTTGCAAGACCTTGA
TCACGAGGAGAAGAATAATATGAAGGCGTTACTTGGTGGTAACAACAGCT
CTGATTATCAGGATGTGACCAAGAAGTCTAGGAATGAATCACTCGATCAG
AACCAAAATGATATCAGTACGATGGAAAACAGTGATGACGACAACAGTCA
AGCAGCAAAGAATGGAAGCATTGAAATCACCAATGTGTCCGGCATTGAAA
CCTCCACCAGCAGCAACAGTATCAACATCTATGGTATGGAGACTGATCAA
AATGCTTACAACGACACTTCCTTAACATCAACAACACAGCATCGTGTATC
GTTTGGTGATTCTGATATCGAAGAATTTACAAATTACATTGAATCTGAAC
CGATGATGTACCGTAATTTCTTTTCCTCCACCAGCAGTGGAGTAAACAGT
AATCGAAGCAGTGTATCTTCAGTATCTGATCATCACCATAAGAGCACATT
GGATCTATCAGCAGATCCAACAACCAAATCGCACCCTTATCATCTTTTTA
CCAGGGTTGTCACTGATATGGAGAATGGCTGCTATCCGGAAGATGAAAAC
CTCGAAGAAGACCAGGGCCCATTATCACCCATCAATAAAGAATCCTATAA
CCAGAAAATAATATCATCACCTATAAACTCCCCAATGATGGCACCGCACT
CGAGCTTCGGCCATTTAGGATCCACA Coding sequence (CDS) from alignment at sc0000391_pilon:78776..82101- >XLOC_045035 ID=XLOC_045035|Name=XLOC_045035|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4644bp|location=Sequence derived from alignment at sc0000391_pilon:78776..82101- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTACCAACAACAACACGTTCGTGGACCAAGTCATTTCTCTCTTCAC
ACGTGATATTTATCTCGATCAGCCAAACTTTCGATCACTACTACAAGCAT
TAAATAAGTTGGGTAATCAAGACCTTGTTCTAGCGTATCCAATCAAGTTG
TTAAACAAACGTGCTAAAGAGGATCCAGTGGGTTGGGATACAATGTTGTT
TGCCTTTAAATGTCCAAATGACGTCACTGCAGATGTGTTGAGCGCTCAAA
ATGAAACTGCAAGCAAAGTGCTCGATGGCTACCAACAACAACACGTTCGT
GGACCAAGTCATTTCTCTCTTCACACGTGATATTTATCTCGATCAGCCAA
ACTTTCGATCACTACTACAAGCATTAAATAAGTTGGGTAATCAAGACCTT
GTTCTAGCGTATCCAATCAAGTTGTTAAACAAACGTGCTAAAGAGGATCC
AGTGGGTTGGGATACAATGTTGTTTGCCTTTAAATGTCCAAATGACGTCA
CTGCAGATGTGTTGAGCGCTCAAAATGAAACTGCAAGCAAAGTGCTCGAA
GATGATTTGACAGCAATGAACAAGGAAAAGAAGCTAGATTCAACAAGCGA
AGTAAAAAGCAAGAGAAAGTCTTCGTTGCCAGATAGCACCAACAGTGAAG
CCAAGAAAGATGTTTCAAAACAAACGCCAGCTTTCAAAGATAACAACGAG
GTTCTTGAAAGCACAGCTGAGATGAAGACTGATTCAAACAAATCTCGGAG
AAAAAGCTCAGCACAGATGACTGAAGAGATTTTGGCAAGTCTGGAAATCC
TTGAACAACCTCTGGTTATGGATGGTAGCAACAATAGCTGCACCAAACTT
ATCAGTGATGTGGAAGAGCTAAAGGTTGCAGTTGAAGAGGAAAGTATTGC
TGCCGAAGCTGAGAATGTACAGCTTGAACAAGGTGTATCCCTTATTGAGG
ATACTGCTGACATTGGATCAAAGTCAAATCACAATATCAAGAACGCATCT
ACCAAGGGTGAATCTTCTTCACCAAAGGAAGATTACCAAAATGACGATGT
CGGCGTTATAGCTGATTCGAAAGACCTTGAAGATCCTAAGGACACTTCTA
CCAATGAAGAAAATACTGATTACAAATCAAAGGCGATGAATAATGACATA
GAATCTATGAGTGAGATTGCTCAAACTGCGATGGCTGGTTGTGAGCTGAC
AGACACTAACAACTTAGAGAAACCTAGTGTCCAAACAACCAAATCTGACA
TCGATTCCACCATAGATGTTGGAGATGGTCTTTCGATAGCAAATGATCAA
ATTGATGCCAATGGTAAAGTAGAGGAAATCGATGATTCATTTGGTGTGCA
AAATGATAAAGCTGGTGAGACTACTAGTCCAATTGCAAACGCCGATGTCA
ACAACGAAAAAGTCGTAAAAATTGCTGAGAATGCTGAAGTTGGTGTCTCT
ACCGGTGACAGAACTTGCCCCAAGGTATCTGAAAATGTTGATGTCAACCT
GTCGGGGGAAGAAACTGAAATTCTCAAGAACGTTGATGAAGACGAGGATG
ATTGGTATGGATCACAGTCTACCAACATCACCAGTGATGACGACAATGAT
TTGACCGAAGATGGTGGATTGCAATTATCATCCTTTGGTGATGACCGTAG
ACGGAGCAGTAATTTGAAATATGCTGGTGTACCCTTGCTGGAGACTATCC
AAGAGAATGGAGAACACAGTGTTTCTAAAGAGAATCTCCAAGTGGAGGAT
GAGATAGTCAACAGGGAATGCAATGAGAATAAGAATGCTGACAATGACAC
TGTCCATAGAAGAAACAATGCACCTAACGAGAATCTTTCAGGTGTTGAGA
ATGGAAACCAAGGAGAAGACAGTGATCGCAAATTTACCAAAGAGAGTATT
AACGTTTTGCAAGACCTTGATCACGAGGAGAAGAATAATATGAAGGCGTT
ACTTGGTGGTAACAACAGCTCTGATTATCAGGATGTGACCAAGAAGTCTA
GGAATGAATCACTCGATCAGAACCAAAATGATATCAGTACGATGGAAAAC
AGTGATGACGACAACAGTCAAGCAGCAAAGAATGGAAGCATTGAAATCAC
CAATGTGTCCGGCATTGAAACCTCCACCAGCAGCAACAGTATCAACATCT
ATGGTATGGAGACTGATCAAAATGCTTACAACGACACTTCCTTAACATCA
ACAACACAGCATCGTGTATCGTTTGGTGATTCTGATATCGAAGAATTTAC
AAATTACATTGAATCTGAACCGATGATGTACCGTAATTTCTTTTCCTCCA
CCAGCAGTGGAGTAAACAGTAATCGAAGCAGTGTATCTTCAGTATCTGAT
CATCACCATAAGAGCACATTGGATCTATCAGCAGATCCAACAACCAAATC
GCACCCTTATCATCTTTTTACCAGGGTTGTCACTGATATGGAGAATGGCT
GCTATCCGGAAGATGAAAACCTCGAAGAAGACCAGGGCCCATTATCACCC
ATCAATAAAGAATCCTATAACCAGAAAATAATATCATCACCTATAAACTC
CCCAATGATGGCACCGCACTCGAGCTTCGGCCATTTAGGATCCACAAAGA
TGATTTGACAGCAATGAACAAGGAAAAGAAGCTAGATTCAACAAGCGAAG
TAAAAAGCAAGAGAAAGTCTTCGTTGCCAGATAGCACCAACAGTGAAGCC
AAGAAAGATGTTTCAAAACAAACGCCAGCTTTCAAAGATAACAACGAGGT
TCTTGAAAGCACAGCTGAGATGAAGACTGATTCAAACAAATCTCGGAGAA
AAAGCTCAGCACAGATGACTGAAGAGATTTTGGCAAGTCTGGAAATCCTT
GAACAACCTCTGGTTATGGATGGTAGCAACAATAGCTGCACCAAACTTAT
CAGTGATGTGGAAGAGCTAAAGGTTGCAGTTGAAGAGGAAAGTATTGCTG
CCGAAGCTGAGAATGTACAGCTTGAACAAGGTGTATCCCTTATTGAGGAT
ACTGCTGACATTGGATCAAAGTCAAATCACAATATCAAGAACGCATCTAC
CAAGGGTGAATCTTCTTCACCAAAGGAAGATTACCAAAATGACGATGTCG
GCGTTATAGCTGATTCGAAAGACCTTGAAGATCCTAAGGACACTTCTACC
AATGAAGAAAATACTGATTACAAATCAAAGGCGATGAATAATGACATAGA
ATCTATGAGTGAGATTGCTCAAACTGCGATGGCTGGTTGTGAGCTGACAG
ACACTAACAACTTAGAGAAACCTAGTGTCCAAACAACCAAATCTGACATC
GATTCCACCATAGATGTTGGAGATGGTCTTTCGATAGCAAATGATCAAAT
TGATGCCAATGGTAAAGTAGAGGAAATCGATGATTCATTTGGTGTGCAAA
ATGATAAAGCTGGTGAGACTACTAGTCCAATTGCAAACGCCGATGTCAAC
AACGAAAAAGTCGTAAAAATTGCTGAGAATGCTGAAGTTGGTGTCTCTAC
CGGTGACAGAACTTGCCCCAAGGTATCTGAAAATGTTGATGTCAACCTGT
CGGGGGAAGAAACTGAAATTCTCAAGAACGTTGATGAAGACGAGGATGAT
TGGTATGGATCACAGTCTACCAACATCACCAGTGATGACGACAATGATTT
GACCGAAGATGGTGGATTGCAATTATCATCCTTTGGTGATGACCGTAGAC
GGAGCAGTAATTTGAAATATGCTGGTGTACCCTTGCTGGAGACTATCCAA
GAGAATGGAGAACACAGTGTTTCTAAAGAGAATCTCCAAGTGGAGGATGA
GATAGTCAACAGGGAATGCAATGAGAATAAGAATGCTGACAATGACACTG
TCCATAGAAGAAACAATGCACCTAACGAGAATCTTTCAGGTGTTGAGAAT
GGAAACCAAGGAGAAGACAGTGATCGCAAATTTACCAAAGAGAGTATTAA
CGTTTTGCAAGACCTTGATCACGAGGAGAAGAATAATATGAAGGCGTTAC
TTGGTGGTAACAACAGCTCTGATTATCAGGATGTGACCAAGAAGTCTAGG
AATGAATCACTCGATCAGAACCAAAATGATATCAGTACGATGGAAAACAG
TGATGACGACAACAGTCAAGCAGCAAAGAATGGAAGCATTGAAATCACCA
ATGTGTCCGGCATTGAAACCTCCACCAGCAGCAACAGTATCAACATCTAT
GGTATGGAGACTGATCAAAATGCTTACAACGACACTTCCTTAACATCAAC
AACACAGCATCGTGTATCGTTTGGTGATTCTGATATCGAAGAATTTACAA
ATTACATTGAATCTGAACCGATGATGTACCGTAATTTCTTTTCCTCCACC
AGCAGTGGAGTAAACAGTAATCGAAGCAGTGTATCTTCAGTATCTGATCA
TCACCATAAGAGCACATTGGATCTATCAGCAGATCCAACAACCAAATCGC
ACCCTTATCATCTTTTTACCAGGGTTGTCACTGATATGGAGAATGGCTGC
TATCCGGAAGATGAAAACCTCGAAGAAGACCAGGGCCCATTATCACCCAT
CAATAAAGAATCCTATAACCAGAAAATAATATCATCACCTATAAACTCCC
CAATGATGGCACCGCACTCGAGCTTCGGCCATTTAGGATCCACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000391_pilon | genome | sc0000391_pilon:78776..82101 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 277-2322:2047 |
| Aaloc | 1-273:3327 |
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