XLOC_045026 (mRNA) -

Overview
NameXLOC_045026
Unique NameXLOC_045026
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:1263349..1264940-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045026 ID=XLOC_045026|Name=XLOC_045026|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1592bp|location=Sequence derived from alignment at sc0000083_pilon:1263349..1264940- (Clytia hemisphaerica_ch_hm2_pilon)
ATTAAAATAGGTTTGGTAGTTTTGAATAACTTTGCCATCAAAATATCAAT CAAAGTAACTTTCATTGCAGATTTATCATACATCAGGTTGGTTTTAAAGA GCTTTTGTGTGATCTGCTTGTTGGTTATTGACTTTCAAAATAGCAAAGTA CTTTGGTTAGGTGTTGGATTAGCATCTGAGAGCGATATGCAGCTACTTGG ATTTCTATGTTTTGGCTTGGTTCTATTTGTCTTAGTGAGCTGTAAGTATT ATCATTTCTTTACAATTGGGGAATAAATTAACCCTATTTTACAAGGGGGC ATCACCCTGGCACTATTTTGAAGACTCCATGAAAAACTTTCCCAAGCACA TGAAAATTGACTTCAAACAAAATCTTATAACGTACATGCCTACCAAATCT CTGTTCGAAGCAACCACCAGTTCGTTTGTTTTTTTTTACTTTGTTGCCAA CATTAGTAATAAAACCCAATAACTTCAATTTTTTACATATTTCAGATTTA ATTTAAAACTTTCAAAAAAATAATGACGTCATCTTCAGCATTCAGATTAT AGTTCTACATACCGTTCATAAAATCAAAACAGAATTAAAACAACTCTTCT ACATAATTTGCTTTCATTTTTTTTGAAGTACGGTTTTTCATCGGTTAGCT GATAGGTGCTATTTAAATGATGACGTCTGTTTCGGTGACGAAAATGGACA GTCACTGAATACGTCACTGGAATTTATCACGACTTTACAGTTTCTAGAGT AAGAAGAACAACGTCATCAAATCATTTTTTTTTCCATAGGTGAAGAATCA AAGACGCAAGAAAGAAATAATGTTCTCCTGAATCCGTTCCATAAAAAAGG TAATAATTCTGGAATACAGCATATTTTTTATATCTCGGTTATACGAATTG TAAGCCATGTTAATAGTATAAACAGAAAATTTATATGAACTAGGTAAACA AAACAATAGCGCTTGGTTATATTAAATGCCCTTGACTTCCCACAATTTTC AATTCTAAGAGCTAGATTTATACACCCCTGTGTCACAGATCCGCTGAGAT CTCAGTCCCATTGGAAAATTTGTCAAAAATTTCGTCCCGGTGAGAAAATA CCCTAGAATTTCAGCCCCACTAGGAAATTGACTTTGATTTCATCCTTAAT CGAAATTCAATGTTTGCATATTGAAATTCAAAACCATCCCACTGGATTTT TTAACCTTGAAACAATATAGAATTTCTATGGATTAAAAGTGGAATTTTAA TCCCCAATGAGGAAAAAGTTCGACCGGGGCTGTGAGGCAGGGGTGTATTA ATGACAGAGTCTCCAAAATCTTTTTGAGTATTTCTGCAAAATAATTTCCA AAATAGTATCACGCATATTGCTTAAAATTTCATATTCTACAGATGGACCA CCCCGGAAGCAAAACGGTTGCCTAGCAACAAGACATTGCTCCAAAGTTCT TCAAGATTGCAAAGGTCATGGAATTTCAAAGAACTGCAGGAAGTATCGGG ATTGTACAATCTGTTCATATGTACGAGTGAATAAATGGCATTGCAAGAAA GCTGTTTGTGAAAAACAACGAAGATATTTGAATAAGAAATAG

Coding sequence (CDS) from alignment at sc0000083_pilon:1263349..1264940-

>XLOC_045026 ID=XLOC_045026|Name=XLOC_045026|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1002bp|location=Sequence derived from alignment at sc0000083_pilon:1263349..1264940- (Clytia hemisphaerica_ch_hm2_pilon)
ATTAAAATAGGTTTGGTAGTTTTGAATAACTTTGCCATCAAAATATCAAT
CAAAGTAACTTTCATTGCAGATTTATCATACATCAGGTTGGTTTTAAAGA
GCTTTTGTGTGATCTGCTTGTTGGTTATTGACTTTCAAAATAGCAAAGTA
CTTTGGTTAGGTGTTGGATTAGCATCTGAGAGCGATATGCAGCTACTTGG
ATTTCTATGTTTTGGCTTGGTTCTATTTGTCTTAGTGAGCTATTAAAATA
GGTTTGGTAGTTTTGAATAACTTTGCCATCAAAATATCAATCAAAGTAAC
TTTCATTGCAGATTTATCATACATCAGGTTGGTTTTAAAGAGCTTTTGTG
TGATCTGCTTGTTGGTTATTGACTTTCAAAATAGCAAAGTACTTTGGTTA
GGTGTTGGATTAGCATCTGAGAGCGATATGCAGCTACTTGGATTTCTATG
TTTTGGCTTGGTTCTATTTGTCTTAGTGAGCTGTGAAGAATCAAAGACGC
AAGAAAGAAATAATGTTCTCCTGAATCCGTTCCATAAAAAAGGTGAAGAA
TCAAAGACGCAAGAAAGAAATAATGTTCTCCTGAATCCGTTCCATAAAAA
AGATGGACCACCCCGGAAGCAAAACGGTTGCCTAGCAACAAGACATTGCT
CCAAAGTTCTTCAAGATTGCAAAGGTCATGGAATTTCAAAGAACTGCAGG
AAGTATCGGGATTGTACAATCTGTTCATATGTACGAGTGAATAAATGGCA
TTGCAAGAAAGCTGTTTGTGAAAAACAACGAAGATATTTGAATAAGAAAT
AGATGGACCACCCCGGAAGCAAAACGGTTGCCTAGCAACAAGACATTGCT
CCAAAGTTCTTCAAGATTGCAAAGGTCATGGAATTTCAAAGAACTGCAGG
AAGTATCGGGATTGTACAATCTGTTCATATGTACGAGTGAATAAATGGCA
TTGCAAGAAAGCTGTTTGTGAAAAACAACGAAGATATTTGAATAAGAAAT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_045026XLOC_045026-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:1263349..1264940 -
Properties
Property NameValue
Aaloc304-501:199
Aaloc244-300:802
Aaloc1-240:1593