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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000391_pilon:212617..218510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045022 ID=XLOC_045022|Name=XLOC_045022|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5894bp|location=Sequence derived from alignment at sc0000391_pilon:212617..218510+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCTACAAAGTCCAAGAAAtccaaaaagctaaaacaaagcTGTAT
TAGCTTCCTACCCGCagcaaacaaaaacattacGCCAACGCTTGTACCAA
AAGGTGAATCTTCCAAGCTTGATACcaaatctgaaaagaaaataaaggat
GCAGATTCTACAAAGATGGTTAAATCTAATAAGATTAAAAACTCAAAAGC
GAAATTATCATCTGCAAACAAAGTTAAACTGAAGGAAGTTATCAGGAAGC
AGAATTCAAGTTCAAAGGTGAAGGTTAATGGGACTTCCAAATCAACAAAA
TCGAAGCCAATACTTTTAAGTGATGATGAGGAAGATGTACCATTATCTAA
ATTGAAGGATAAAATAATGACTCCTACAAAGAAATCCTCGACACCAACCA
AAGTTGTTTTGCCACCAAATGCAAGTGCATCCAATATTACTAAAACTTTG
AATAATTCTCCAATAAAATCAGTATCTCTTTCTCAAGTCAAACTAACAGC
TTCTAACATCCAGAAACTGCTACCAAGTTTGAACATCACCAATGCACAGC
AGAAACCAAACACACCAATAGGGGCTGGTGTTATACCACAGGTATCGTTT
ATATAATTGGCTTTTTGCTTCTCTTTGTTGCTTTTATGTGTTTCTAAAAT
AATTGTGCACTATGTTGTACCTTACTACAACTTAGTTTGccctttgaaat
ttttatgcaatccttgtttttttattattattatgatctgttcccttttg
attttcaacttttggtgATTTTGCCCAAAAAGGTCCCCTTTTATAACATC
CTTTCATTCTCAGCAGTCTAGAAACAGGTCTCGTCTAGAAACAGGTCTTG
TTTTCTTATCAACATGCTCCTTTGTGATAAGAATATGTATGGCTATAATT
ATACATTAAAGGATTTAACATTTTACTTCTTGTTCAGGCATTACAAAGCT
TATCCAATTCGATCAAGGTACCAATCAAGTCACCAGTTATCAATGGACAA
CAAGTGTATGTCATAATAGATTTTTAACTCAGAAGTTTCTTTGGAATTTT
GATTATGACTATTTCCTTTATGGGAGTTCTCATTTTAATACACAGTGTAA
ACCCCTGCCATTATCTTGAACAGGCTTCAATCATCTAATCATTCTAAATA
TACTGTCATTTTTCTAGGCTGCTAATGCCAACAAAGCCTTTACAAGTTCA
ACCCAAAAACTTGATCATTGCGATTGATATGGATCCAGAACAATGGTAGG
GTCACAAGTTTTTATCAACAGCGGACTTGATGTATTTGTTTACtaatctt
tttattcattcattcattcattcatcatATAATCTGTCCTGGTCTGGAAA
GTCTGGAAGCCTATTGTTGTAtgcttttgttattctttttatttttcaat
aacaaaatttgaagatttacTTAGTGAAAACTGATTTGCTGATGCAGATA
ATCCATGATTCAATGTTTTGCTTAGCTGTAACAAAGTCTCAAAGAATTTT
TAATTGAATTCTGAAAGGTTCAGACATACTAAAAGCTGCAGTAAAAAGTA
TAAGCTtgtatatagtgaagatatgtcaTTGTAGAcgaagaaaagtattg
ataggGTGTAAACTGGAaccatgaaaaaatactttttttggattttcaaa
attgtcacaattttttatcaaaatttatcatattgtAAGACTTCTTGCGC
AATTTTGAGGTCCATACGTCAAAAATCCACTGTTTGCCCCAGGGGTATCT
GATTCGCGGTAGTagcaaaaaacggcaaaaatggcattttttgtccattt
taagatTATTAAAGGCcaggaaatggtcaaaatggtttctaaatggtgtc
ttgtactaatattcaacacaaaaagacaaaataaccccagcgagatcgct
caatgtttcaatttcaggctaaaagGGCCGATTTTCtcggattctgggta
gcaaaatgcatgaaagcagcatttttgaggacccacaacttttaaacttt
ttaacgtacacacttgaaattttcagcaatgaaacacttcagagaaagct
ccaggaaaaatcaaatttgagttttcaaatatttcctataaatccataat
ggcgccctataaattgagttttcatgctaaatgccaatatttcaagctaa
aacttggttttctctggctaaaatctcaaaaatggtttcaaatggtgtcc
tgaaatctttgggtgttgaaagtattcaggaaaaactctgggagaatcaa
aatggtttgggttagaaatttgccaaagtccgccatatggaattgcattt
ccacttaaaaacgcgatatttagagttaatgtctaattttctcagactaa
aatctcaaaaatggtttcaaatggtgtcctgaaatcttttggtgttgaaa
gtattctggaaatactctgggagaatcaaaatggtttgggtcagaaattt
gcccaagtctgccattatggtattccatttcccactaaaacgcaataaTT
AGAGTTAATgtctaattttctcagactaaaatctcaaaaatggtttcaaa
tggtgtcctgaaatcttttggtgttgaaagtattctggaaatactctggg
agaatcaaaatggtttgggtcagaaatttgcccaagtctgccattatggt
attccatttcccactaaaacgcaataaTTAGAGTTAATgtctaattttct
cagactaaaatctcaaaaatagtttcaaatggtgtcctgaaatcttttgg
tgttgaaagtattctgaaaatactctgggagaatcaaaatggtttgggtc
agaaatttgcctaagtctgccattattgtattgcatttcccactaaaatg
cgatttttaaagttaaagtctaattttctcaggctaaaatctcaaaagtg
gtttcaaatagggtcctgaaatcttttggtgttgaaagtattctggaaat
actatgggaaaaccaaaatggttttggtcagaaatttgccaaagttcgcc
attatggaattgcatttcccactaaaacgcaatatttagagctaaactct
aattttctcaggctaaaatctcaaaagtggtttcaaatagggtcctgaaa
tcttttggtgttgaaagtattctggaaatactctgggaaaaccaaaatgg
ttttggtcagaaatttgccaaagtctgccattatggaattgtatttcatt
ctaaaacaatgttttgagtaagcttgagtgtttttcctaaagaaatgaaa
ttcataatggcagactttggcatatATATGACCATTGTGAACAACTATGA
TTTTCCTTGAGTGTTCCCAGATtaatttcaacaccaaaagatttcaggac
cctatttgaaaccatttttgagattttagcctgagaaaattagactttaa
ctcttaaatatcacgttttagcaggaaatgcaataccatattggcagact
taggcaaatttcaaacccaaaccattttggttctcccagagtatctccag
aatactttcaacaccaaaagatttcaggaccctatttgaaaccatttttg
agattttagtctgagaaaattagacattaactctaaatatcgcgttttta
agtggaaatgcaattccatatggcggactttggcaaatttctaacccaaa
ccattttgattctcccagagtttttcctgaatactttcaacacccaaaga
tttcaggacaccatttgaaaccatttttgagattttagccagagaaaacc
aagttttagcttgaaatattggcatttagcatgaaaactcaatttatagg
gcgccattatggatttataggaaatatttgaaaactcaaatttgattttt
cctggagctttctctgaagtgtttcattgctgaaaatttcaagtgtgtac
gttaaaaagtttaaaagttgtgggtcctcaaaaatgctgctttcatgcat
tttgctacccagaatccgaGAAAATCGGCCcttttagcctgaaattgaaa
cattgagcgatctcgctggggttattttgtctttttgtgttgaatattag
tacaagacaccatttagaaaccattttgaccatttcctgGCCTTTAATAa
tcttaaaatggacaaaaaatgccatttttgccgttttttgctACTACCGC
GAATCAGATACCCCTGGAGCAAACAGTAGATTTTTGACTTATGGACCTca
aaattgcgcaaaaagtcttacaatataataaattttgataaaaaattgtg
acaattttgaaattctaaaattcaaaatccagTTTACACCCTAGTATTGA
tgtataaataactcaaactgataaaacgaaaaaagtgaagaatatatttt
ttaattatgtaTATTATATATGTCAGTTTTTAAGTTACCTGTGGCTGCAT
CAATTCTTCATGAAATATAAGGCTGAAAAGtagctttttgatttttagga
agAAGCTCCCTCTGGCAGAGCAACaaaaaataattgctcaaaaaaggtaa
attaatttgtaattataaattaattCTGTTCTGACTGATCTATTTTTACA
TTATAAAAACTCTGCCAATGAAAGTCTTTACATTTCGCCTAATAACCCTT
TTATCTGCCCTCCCTGCTCGTATAGAATAAATTTATGGCAGATCAGATTG
GGTCGGAAGagcaaaaatgaataaaatttttgtttattgttaTAAATTTC
TTGTTTGAAGTCTGGCTTAAAGCTGATGTTTTTTATTAAATACTTTAGGG
CACAACTAAATAAAACACAACAACAGTTGATCACTATTGCCATAAAGAAA
CCACCAACCCCAATTGTGCCTGGACAAAGAGTCGTATTGAATTCAGCTTC
AGGGTCCATAGGGCCACAGAAACCAAAAATTTCATATCCTAACAAACCAC
TGGTTCAGCCTCCCGGCATGCCAACTGGATCTCTACTTCCAAAATCAGGA
GGTCCTATTGCAAATTCTGGCGCTTACTCCTTTACTGATCTCATTTCTGA
GGTAAGTTTAATTTCCATTCTGGGAAATGTGCTTCTAGGTCTCACCCTTT
GGTCCCAAAAGAGAGAGATGTAACTTGCTCTCTCAAAATAGCTCTGTTGC
AGAATATTTATAATTGCAGAATCACTTCCATCTATGAGGTAGAGACAAGC
CACTTGTCCTActatgaaataatcaaaaaacaaaaaaaaagtgatgagat
cagattttcatttttccaagacCCTCATTTTAAGACCGAACATTTAGTAA
TGTGAacacaaattgaaaaatccTTTTTATCACAAACTCTTGTTCTAGAA
AAAGCATGAGAGTGAAGTTTCTGGTTTAAGACCACTACCAAAATTGAAGA
AAGTCCATCTACCAGAATCATTAGAATACAAAAGTTTCGGCAGTATTTTA
ATGATCACAGAATTTGTTGACATTTTCAAAGGATTTCTGATGACTGATGA
AAATTTTCCCATCAAAACAGGTATGATTTGTGAAGAAATGCATCAattct
tgttttttctatttcctctttatttgctataggtttcttttttatagggc
tacatttttctttctgtttattgaaATTTGGTCAGTCAAAATTTGTTACT
AGGAATAGGATTGACCTTTTGAATAAGATAGTTTGTAAATTAATTTCTAA
TCTTCACTGTTCCTTCCAGATTCACCAAAGGATCTAAAAACTCAAGACAT
TGCATGAAATCCTTCAAGTAACActgattttatttgctttttgttgtttt
tcagaTGAGATCATTGAAGCTGTGTCTCAAAAGAAGGAATCAGAAACAGT
GCTCAAGATTTTATTGTACTTCTTGAAGGTTTTGTTAGGAAATGAATGTT
ACAAAGTATGCCCCATGAGTCATATGTTTTTTACTATAAAATGA Coding sequence (CDS) from alignment at sc0000391_pilon:212617..218510+ >XLOC_045022 ID=XLOC_045022|Name=XLOC_045022|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2700bp|location=Sequence derived from alignment at sc0000391_pilon:212617..218510+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCTACAAAGTCCAAGAAAtccaaaaagctaaaacaaagcTGTAT
TAGCTTCCTACCCGCagcaaacaaaaacattacGCCAACGCTTGTACCAA
AAGGTGAATCTTCCAAGCTTGATACcaaatctgaaaagaaaataaaggat
GCAGATTCTACAAAGATGGTTAAATCTAATAAGATTAAAAACTCAAAAGC
GAAATTATCATCTGCAAACAAAGTTAAACTGAAGGAAGTTATCAGGAAGC
AGAATTCAAGTTCAAAGGTGAAGGTTAATGGGACTTCCAAATCAACAAAA
TCGAAGCCAATACTTTTAAGTGATGATGAGGAAGATGTACCATTATCTAA
ATTGAAGGATAAAATAATGACTCCTACAAAGAAATCCTCGACACCAACCA
AAGTTGTTTTGCCACCAAATGCAAGTGCATCCAATATTACTAAAACTTTG
AATAATTCTCCAATAAAATCAGTATCTCTTTCTCAAGTCAAACTAACAGC
TTCTAACATCCAGAAACTGCTACCAAGTTTGAACATCACCAATGCACAGC
AGAAACCAAACACACCAATAGGGGCTGGTGTTATACCACAGATGTCATCT
ACAAAGTCCAAGAAAtccaaaaagctaaaacaaagcTGTATTAGCTTCCT
ACCCGCagcaaacaaaaacattacGCCAACGCTTGTACCAAAAGGTGAAT
CTTCCAAGCTTGATACcaaatctgaaaagaaaataaaggatGCAGATTCT
ACAAAGATGGTTAAATCTAATAAGATTAAAAACTCAAAAGCGAAATTATC
ATCTGCAAACAAAGTTAAACTGAAGGAAGTTATCAGGAAGCAGAATTCAA
GTTCAAAGGTGAAGGTTAATGGGACTTCCAAATCAACAAAATCGAAGCCA
ATACTTTTAAGTGATGATGAGGAAGATGTACCATTATCTAAATTGAAGGA
TAAAATAATGACTCCTACAAAGAAATCCTCGACACCAACCAAAGTTGTTT
TGCCACCAAATGCAAGTGCATCCAATATTACTAAAACTTTGAATAATTCT
CCAATAAAATCAGTATCTCTTTCTCAAGTCAAACTAACAGCTTCTAACAT
CCAGAAACTGCTACCAAGTTTGAACATCACCAATGCACAGCAGAAACCAA
ACACACCAATAGGGGCTGGTGTTATACCACAGGCATTACAAAGCTTATCC
AATTCGATCAAGGTACCAATCAAGTCACCAGTTATCAATGGACAACAAGT
GCATTACAAAGCTTATCCAATTCGATCAAGGTACCAATCAAGTCACCAGT
TATCAATGGACAACAAGTGCTGCTAATGCCAACAAAGCCTTTACAAGTTC
AACCCAAAAACTTGATCATTGCGATTGATATGGATCCAGAACAATGGCTG
CTAATGCCAACAAAGCCTTTACAAGTTCAACCCAAAAACTTGATCATTGC
GATTGATATGGATCCAGAACAATGgaagAAGCTCCCTCTGGCAGAGCAAC
aaaaaataattgctcaaaaaaggaagAAGCTCCCTCTGGCAGAGCAACaa
aaaataattgctcaaaaaagGGCACAACTAAATAAAACACAACAACAGTT
GATCACTATTGCCATAAAGAAACCACCAACCCCAATTGTGCCTGGACAAA
GAGTCGTATTGAATTCAGCTTCAGGGTCCATAGGGCCACAGAAACCAAAA
ATTTCATATCCTAACAAACCACTGGTTCAGCCTCCCGGCATGCCAACTGG
ATCTCTACTTCCAAAATCAGGAGGTCCTATTGCAAATTCTGGCGCTTACT
CCTTTACTGATCTCATTTCTGAGGGCACAACTAAATAAAACACAACAACA
GTTGATCACTATTGCCATAAAGAAACCACCAACCCCAATTGTGCCTGGAC
AAAGAGTCGTATTGAATTCAGCTTCAGGGTCCATAGGGCCACAGAAACCA
AAAATTTCATATCCTAACAAACCACTGGTTCAGCCTCCCGGCATGCCAAC
TGGATCTCTACTTCCAAAATCAGGAGGTCCTATTGCAAATTCTGGCGCTT
ACTCCTTTACTGATCTCATTTCTGAGAAAAAGCATGAGAGTGAAGTTTCT
GGTTTAAGACCACTACCAAAATTGAAGAAAGTCCATCTACCAGAATCATT
AGAATACAAAAGTTTCGGCAGTATTTTAATGATCACAGAATTTGTTGACA
TTTTCAAAGGATTTCTGATGACTGATGAAAATTTTCCCATCAAAACAGAA
AAAGCATGAGAGTGAAGTTTCTGGTTTAAGACCACTACCAAAATTGAAGA
AAGTCCATCTACCAGAATCATTAGAATACAAAAGTTTCGGCAGTATTTTA
ATGATCACAGAATTTGTTGACATTTTCAAAGGATTTCTGATGACTGATGA
AAATTTTCCCATCAAAACAGaTGAGATCATTGAAGCTGTGTCTCAAAAGA
AGGAATCAGAAACAGTGCTCAAGATTTTATTGTACTTCTTGAAGGTTTTG
TTAGGAAATGAATGTTACAAAGTATGCCCCATGAGTCATATGTTTTTTAC
TATAAAATGAaTGAGATCATTGAAGCTGTGTCTCAAAAGAAGGAATCAGA
AACAGTGCTCAAGATTTTATTGTACTTCTTGAAGGTTTTGTTAGGAAATG
AATGTTACAAAGTATGCCCCATGAGTCATATGTTTTTTACTATAAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000391_pilon | genome | sc0000391_pilon:212617..218510 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1213-1350:5757 |
| Aaloc | 1039-1209:5299 |
| Aaloc | 787-1038:4750 |
| Aaloc | 739-783:4450 |
| Aaloc | 661-735:1169 |
| Aaloc | 592-657:938 |
| Aaloc | 1-591:1 |
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