XLOC_045018 (mRNA) -

Overview
NameXLOC_045018
Unique NameXLOC_045018
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000165_pilon:328267..329070+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045018 ID=XLOC_045018|Name=XLOC_045018|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=804bp|location=Sequence derived from alignment at sc0000165_pilon:328267..329070+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGAAAATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCATT CAGTGCACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTtgtaaac aagaaaaattgacaCAAAAACGAGAAAATATCATTTCATTATCGCTTTCT GAAGCTGTTGGTGAAAGAAGGAATGTCACCGATTTTTACAACTGTTCCTC ATTACCATCCAAAAATATTGCTGACGTCATGCTtctcttaaaaaacaaac acaaacatCGAAAAATACATTTCCTTTTTGATGAAGTGCCGCAAGAGCTG TTCACAAAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGTGAATT TCGAGAATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAA AGATAACCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAAAA AGCTCAGGCATGGAACTTTTCAAACTACCAACCACAATGAGGATGAGCAG TTGCTTACataaattgaaagaagtttTGGAAGGTGAAATCGAAAGTTCGC CCTGCTCCTTAAACTTAGAAGTTCGATCGAAAGGTATTACATACCATTTA CGTAACATTCTTTTATAATCGTGTTCAATTGCAACAGTGTGCAAGTAAAA TATGCTCATTTCCATTTATGAccgaaatattttcttacattttaatttta atttttcaggaaacGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATA ATCCACGAAACTCAACCAAATGGAGATAGGCCAGGTGGCTCTCAATCAAC AACA

Coding sequence (CDS) from alignment at sc0000165_pilon:328267..329070+

>XLOC_045018 ID=XLOC_045018|Name=XLOC_045018|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1356bp|location=Sequence derived from alignment at sc0000165_pilon:328267..329070+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGAAAATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCATT
CAGTGCACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTtgtaaac
aagaaaaattgacaCAAAAACGAGAAAATATCATTTCATTATCGCTTTCT
GAAGCTGTTGGTGAAAGAAGGAATGTCACCGATTTTTACAACTGTTCCTC
ATTACCATCCAAAAATATTGCTGACGTCATGCTtctcttaaaaaacaaac
acaaacatCGAAAAATACATTTCCTTTTTGATGAAGTGCCGCAAGAGCTG
TTCACAAAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGTGAATT
TCGAGAATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAA
AGATAACCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAAAA
AGCTCAGGCATGGAACTTTTCAAACTACCAACCACAATGAGGATGAGCAG
TTGCTTACataaattgaaagaagtttTGGAAGGTGAAATCGAAAGTTCGC
CCTGCTCCTTAAACTTAGAAGTTCGATCGAAAGCTGAAAATGAGCAACCA
AGACTTGATTATAAACGTTACTTTCGACCCATTCAGTGCACTAGATAAGA
AAGTCGACCATTCATTTAACGAGCTTtgtaaacaagaaaaattgacaCAA
AAACGAGAAAATATCATTTCATTATCGCTTTCTGAAGCTGTTGGTGAAAG
AAGGAATGTCACCGATTTTTACAACTGTTCCTCATTACCATCCAAAAATA
TTGCTGACGTCATGCTtctcttaaaaaacaaacacaaacatCGAAAAATA
CATTTCCTTTTTGATGAAGTGCCGCAAGAGCTGTTCACAAAGACCTACTC
AGAAACACTACGTGGCCGTTTGGAGAGTGAATTTCGAGAATCAGTTGTCG
TGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAGATAACCGAGGAAGGC
AAGGTCACCAATTCACAGGAGATTGATTTAAAAAGCTCAGGCATGGAACT
TTTCAAACTACCAACCACAATGAGGATGAGCAGTTGCTTACataaattga
aagaagtttTGGAAGGTGAAATCGAAAGTTCGCCCTGCTCCTTAAACTTA
GAAGTTCGATCGAAAGgaaacGTTTTGCTAACAAAAGACGAATCTAACAA
GGCCATAATCCACGAAACTCAACCAAATGGAGATAGGCCAGGTGGCTCTC
AATCAACAACAgaaacGTTTTGCTAACAAAAGACGAATCTAACAAGGCCA
TAATCCACGAAACTCAACCAAATGGAGATAGGCCAGGTGGCTCTCAATCA
ACAACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_045018XLOC_045018-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000165_pilongenomesc0000165_pilon:328267..329070 +
Properties
Property NameValue
Aaloc586-678:712
Aaloc1-582:1