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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000497_pilon:47051..48741- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045011 ID=XLOC_045011|Name=XLOC_045011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1691bp|location=Sequence derived from alignment at sc0000497_pilon:47051..48741- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATCTAAACTGTTACGTATGCGGATCTACACTGGCGAAACAATGCAC
TGGATGCCATACAATTTCATATTGTGGTAAAGACTGTCAAAAGAAAGATT
GGCCATTCCATAAAAATTCCTGCAAGTCTAGAGGCGTGAATGTAATAGAT
CTCCTTATCAAGGAAGGAGCATATGATTTTCTTGTGATCGTCAAGAAAAT
ATTCCATTATCTATCTGGCATTGATTTACATTATGTACGATGTGTGAAAC
GTTCTTGGCGTGACTTCATTCAATTGATGTGGCAATCTGAATCAGATCGA
GATTTGTTTGAGGCCAAGTTGGAGGAGCAATGGCTATTAGAATTTCCACG
TCCTCGCATGATTTATGAAGGCTTCGGTAACTCTGCCGAGAAAATGAAAC
ACAGTGACCAAGAGTTGTTTTTCTCATGTGTCAATGAGAGCGGAATACTT
GTACTAGACATGGATGAAATGTACAAAGTGACATATATTTCTCGATGGCA
AACCAAAGTGAAATATACCATACCGGTTGAGAAACCTTTTAATATCAAGA
GCATTTGGGATGTGCATAAGGATTTCGTGATGGTTAGTGATAAAGCTGGT
ATCAAATGTTGGAATCGCAAAACACACAAAGAAATGAAAATCCATGATCA
ATCTAACTCATTGCAGGTAGCCTTACATTCTTCCCAACTTGACTCAGAAC
ATAATTGGTAAACTTCTTTTTTCAGCTTTATGGCCAAATTTGTTCATTCG
ATCTGCCCAGCCATGGTGCAATGTGACTACAAACTCCAGATAGAAGAGAG
TTAAACACGTCACCTTATTCACGCTTTAACTTTGATTTTCCATTATTTTT
ATAGGCTGGTATTGGGTTAACAAGAAGATTCGCAGGGAGAGGCAAGAAGA
GAAAAGATGTTGCTCAAAAGATTTTTATTTTTGGTGACATAGTAATTGTA
GTATATATCAGTGGTCTTTTCTTGAAATTTCTGGCTACCACAACCCCGTT
GGGACCTGGCAAAGATCAGCGAAACACCGTGACTTTTCACCTCATGCACA
GATTCGAAAAGCTCCTTGGTCAATCACCTGATATTTCTGACCACATCCAA
ATCTCTCACAATCCAAAAGAAGGATACCCTGAAGGCCGTTCACTGATTTA
TTCAAAGTTTTACCACAACAATGGTGGAGATCCTGAAGGTGGTACTATTT
GGTGTCTGGAAGACGATGAGTGTTTGCATGAAATTCATGATATTGATAAT
ATCCACTCAGTGATTTGTGTTAATGGTGATGAGTATGTAATGGCTTCAGG
AGTTCTCTCTTTCGGAGACACCTATCTTGATTTTCGGCGAAATGGGGAAA
TGGTACGTGACATGTTGGTCGGTGGTGGACTCAGAGATGTGCAGATGAAT
AAGTATTGTATTGCTATACTCTCTAATCCTGGCTTCAGGAAAGTCATGCT
TTTGCAATTATATCGCTTTGAAGATTTTTGTGAAGGTTATTCCATTGACT
TGAAACCAACATTGACGAGAGAGTTTGATGTACCCATCTTTACTCTTTAC
ATGACAAAAAATCAAGTGATGTGGAGTCGTCCTGATTTTTCTTATTATGA
GGACGAGAAAGACAGAAAGGATGATTCAAAACATGTGGTGATGTCATTAA
ACTTCTGGTATGCCCCCTATACCGGACGTGGATGCTTGTAA Coding sequence (CDS) from alignment at sc0000497_pilon:47051..48741- >XLOC_045011 ID=XLOC_045011|Name=XLOC_045011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3006bp|location=Sequence derived from alignment at sc0000497_pilon:47051..48741- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATCTAAACTGTTACGTATGCGGATCTACACTGGCGAAACAATGCAC
TGGATGCCATACAATTTCATATTGTGGTAAAGACTGTCAAAAGAAAGATT
GGCCATTCCATAAAAATTCCTGCAAGTCTAGAGGCGTGAATGTAATAGAT
CTCCTTATCAAGGAAGGAGCATATGATTTTCTTGTGATCGTCAAGAAAAT
ATTCCATTATCTATCTGGCATTGATTTACATTATGTACGATGTGTGAAAC
GTTCTTGGCGTGACTTCATTCAATTGATGTGGCAATCTGAATCAGATCGA
GATTTGTTTGAGGCCAAGTTGGAGGAGCAATGGCTATTAGAATTTCCACG
TCCTCGCATGATTTATGAAGGCTTCGGTAACTCTGCCGAGAAAATGAAAC
ACAGTGACCAAGAGTTGTTTTTCTCATGTGTCAATGAGAGCGGAATACTT
GTACTAGACATGGATGAAATGTACAAAGTGACATATATTTCTCGATGGCA
AACCAAAGTGAAATATACCATACCGGTTGAGAAACCTTTTAATATCAAGA
GCATTTGGGATGTGCATAAGGATTTCGTGATGGTTAGTGATAAAGCTGGT
ATCAAATGTTGGAATCGCAAAACACACAAAGAAATGAAAATCCATGATCA
ATCTAACTCATTGCAGATGCATCTAAACTGTTACGTATGCGGATCTACAC
TGGCGAAACAATGCACTGGATGCCATACAATTTCATATTGTGGTAAAGAC
TGTCAAAAGAAAGATTGGCCATTCCATAAAAATTCCTGCAAGTCTAGAGG
CGTGAATGTAATAGATCTCCTTATCAAGGAAGGAGCATATGATTTTCTTG
TGATCGTCAAGAAAATATTCCATTATCTATCTGGCATTGATTTACATTAT
GTACGATGTGTGAAACGTTCTTGGCGTGACTTCATTCAATTGATGTGGCA
ATCTGAATCAGATCGAGATTTGTTTGAGGCCAAGTTGGAGGAGCAATGGC
TATTAGAATTTCCACGTCCTCGCATGATTTATGAAGGCTTCGGTAACTCT
GCCGAGAAAATGAAACACAGTGACCAAGAGTTGTTTTTCTCATGTGTCAA
TGAGAGCGGAATACTTGTACTAGACATGGATGAAATGTACAAAGTGACAT
ATATTTCTCGATGGCAAACCAAAGTGAAATATACCATACCGGTTGAGAAA
CCTTTTAATATCAAGAGCATTTGGGATGTGCATAAGGATTTCGTGATGGT
TAGTGATAAAGCTGGTATCAAATGTTGGAATCGCAAAACACACAAAGAAA
TGAAAATCCATGATCAATCTAACTCATTGCAGGCTGGTATTGGGTTAACA
AGAAGATTCGCAGGGAGAGGCAAGAAGAGAAAAGATGTTGCTCAAAAGAT
TTTTATTTTTGGTGACATAGTAATTGTAGTATATATCAGTGGTCTTTTCT
TGAAATTTCTGGCTACCACAACCCCGTTGGGACCTGGCAAAGATCAGCGA
AACACCGTGACTTTTCACCTCATGCACAGATTCGAAAAGCTCCTTGGTCA
ATCACCTGATATTTCTGACCACATCCAAATCTCTCACAATCCAAAAGAAG
GATACCCTGAAGGCCGTTCACTGATTTATTCAAAGTTTTACCACAACAAT
GGTGGAGATCCTGAAGGTGGTACTATTTGGTGTCTGGAAGACGATGAGTG
TTTGCATGAAATTCATGATATTGATAATATCCACTCAGTGATTTGTGTTA
ATGGTGATGAGTATGTAATGGCTTCAGGAGTTCTCTCTTTCGGAGACACC
TATCTTGATTTTCGGCGAAATGGGGAAATGGTACGTGACATGTTGGTCGG
TGGTGGACTCAGAGATGTGCAGATGAATAAGTATTGTATTGCTATACTCT
CTAATCCTGGCTTCAGGAAAGTCATGCTTTTGCAATTATATCGCTTTGAA
GATTTTTGTGAAGGTTATTCCATTGACTTGAAACCAACATTGACGAGAGA
GTTTGATGTACCCATCTTTACTCTTTACATGACAAAAAATCAAGTGATGT
GGAGTCGTCCTGATTTTTCTTATTATGAGGACGAGAAAGACAGAAAGGAT
GATTCAAAACATGTGGTGATGTCATTAAACTTCTGGTATGCCCCCTATAC
CGGACGTGGATGCTTGTAAGCTGGTATTGGGTTAACAAGAAGATTCGCAG
GGAGAGGCAAGAAGAGAAAAGATGTTGCTCAAAAGATTTTTATTTTTGGT
GACATAGTAATTGTAGTATATATCAGTGGTCTTTTCTTGAAATTTCTGGC
TACCACAACCCCGTTGGGACCTGGCAAAGATCAGCGAAACACCGTGACTT
TTCACCTCATGCACAGATTCGAAAAGCTCCTTGGTCAATCACCTGATATT
TCTGACCACATCCAAATCTCTCACAATCCAAAAGAAGGATACCCTGAAGG
CCGTTCACTGATTTATTCAAAGTTTTACCACAACAATGGTGGAGATCCTG
AAGGTGGTACTATTTGGTGTCTGGAAGACGATGAGTGTTTGCATGAAATT
CATGATATTGATAATATCCACTCAGTGATTTGTGTTAATGGTGATGAGTA
TGTAATGGCTTCAGGAGTTCTCTCTTTCGGAGACACCTATCTTGATTTTC
GGCGAAATGGGGAAATGGTACGTGACATGTTGGTCGGTGGTGGACTCAGA
GATGTGCAGATGAATAAGTATTGTATTGCTATACTCTCTAATCCTGGCTT
CAGGAAAGTCATGCTTTTGCAATTATATCGCTTTGAAGATTTTTGTGAAG
GTTATTCCATTGACTTGAAACCAACATTGACGAGAGAGTTTGATGTACCC
ATCTTTACTCTTTACATGACAAAAAATCAAGTGATGTGGAGTCGTCCTGA
TTTTTCTTATTATGAGGACGAGAAAGACAGAAAGGATGATTCAAAACATG
TGGTGATGTCATTAAACTTCTGGTATGCCCCCTATACCGGACGTGGATGC
TTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000497_pilon | genome | sc0000497_pilon:47051..48741 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 667-1503:838 |
| Aaloc | 1-666:1692 |
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