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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000497_pilon:14037..17178- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045008 ID=XLOC_045008|Name=XLOC_045008|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3142bp|location=Sequence derived from alignment at sc0000497_pilon:14037..17178- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAAAGAAAATTAAAAACATCAGAACCTGCACGAAAGGTGGTTTC
CAAAATAAATGACGTGAAAACCGCCCCAAATGAGAAGATGAAAGAAAAAT
TGGTTCCGTTTGATTTCGATGACCAAGATTGTGACGTCATCATTGAAGTC
GAAGACAAAGAAGTCTATTTACCTTCCACTTTCTTGAAAATGGCTTCGAA
AGAAAATGTTTTACGGCCGTTTACTGGTGGGAAATTGTACCTTGATGTGT
CTTCAAAAAGTTTGGTTGAAGCATTGTCTTTTTACGTCCCAAAAATAAGC
AAGGGTGATACCGTTGATTGTAAGTGACTTTATCTTGGCAATTTTCGTTT
CTATGAAAGACGGAGGGCATTTGATCGTGGGTGTATGATGATAAAATTTT
GTAAACATGTGACTCATAAAATTTTATTAAAAGTCAAAAAGTTTCGGAGT
GTCAAAAGAAATTTTCTGTGAGCTAGTAGCAAAATAGCGCAGGGTGGTGG
AAAACATCCCCCTGATAAATACGGTTAAAGCTTCACTTTTTCTTGCTTGA
GAAAGGTTGAAGATTCCTCTCTAACTCCTTCGGGGCTTTTGATGCAGGAG
AAGGATACTAAGAGGGTCTTCTTTCTAACGACATAAGTAAGTTTTATAGA
TAGTACAAATTTTCGGGGGGGGGGTTCCTAGGAAAAAAGTTACCACAGAG
TATTTACTCACTGGGAAACAAGTACTGCGGGTGTACTTTTTTCCGGGGAA
TACTTAATTTTTGTTGACTGGGGGTCAGTTATGACTTTTTGATAGACTTG
ACGGCGTTGATAAATGTAATATAGCTTCGACAACTTCGACACTGGATCCA
GTTAAATTGAAAACTTTTTTTTCCGGCCAACTTTCCACACATCACGAGCT
AAACAACTAATCTCAAACTATTTGATATTTCAGTTACAAATCTTGAGGAG
GCTGTCAGGGTGGCTAAATTTCTAAATTTAAAAAGACTTCAAGATTACAT
TGAAAAGGTCTGCTTGAGAAAAGCTTTTTACCATCCACGAGTTCTTGACG
AAAAAGGCATTAACGCTTTGAGAATCGCTCAAACCTACGACATGTTTTTG
TTCTTAGAACAACGATGTATTTCTGAAAGTTGGCTGAAACACTTCGGTCT
TATCGCTAATCACGATTTTCTAGTCTTGAGCAACGACATGCGATATGAGC
TTTTAAAGAACACAGTTATACGTCAATTGGTGACTTATGCCAAACATGTT
TTAGACTAGTAAACTAGCCGTTGAAAACATAGACTCTATCTAAAAATTCA
AGCTCAAAAGAAAAAGCATCGAAAAAGTGATGTTGCGTGTCTTTTTTGAA
TTCTAACGACTAGAAGCTTCTTCCCTCAAAAAACGTTGTTTAATTTTTCA
ACTTTTTTTAGATTTTTGAGAAACCATCCAACTTTTTTGACTAAATTTTA
TTTCATAGTAACATTGAACTTAGGAACATAGAAATAAAAGAACAATTGTT
AAAACGCAATTAAAAGAAAGAAAAATAAACGCAAACACGTACGCACCTGA
CATACAGAAATCTGTATGTCTGAGCTTATGATTTTAGCTGAAGAAAAAAA
AGGCGTGGAAGAAGCTTCAAGTCTGTAATTCTCCTTTTGCACGTACATTT
ATAGTTTACTTTTTATTATTATTATTATTGTATAGTTCTTATAGCCAGAG
TAATTACAGACTTGTTTACAAGTCTAAACATGTTTACGAGAGAAAGTTTT
TCCGTGAAACTGTAGTTGGAATGGAGATTCAAATGATTTTCAACTTTCTT
GATTTGGAAGTATACGAAAATCGGATGGTTGACCTTGCACCTAAGAAAAA
CCCTATTTTTATGCCGAAAAACAATTATTTGACTTCTTTGGAAAAGTTTG
TTGATTTGGAGTCGATATCATGCAATAAAGAGTCTGCTGATTGCGTCACG
CTAGTCGTTGAAGAGAGAGAAATTCACGTCAATTCTTTCCTCTTAACCAA
CAATTCTCCTGTTTTCAAAGCAATGTTGAGCTCAAATTCATTCAAAGAAG
GTCAGAGCAAAAGGATTGAGTTACCAGGCAAGAATTTCAACCAAATCATT
TATCTTCTGCAGCATTTATATTCGTCGAAACATATCGGAAATATTCATCG
TAAGTATTTTCAAATCTAATGGGATAACAATGATTTCATTGAGCCGACAC
CATTCCTTTTCATCGTTCGATAAGAAAGTGGTTATATGTACAAACTTTTT
TAATAAGAATAGTGTACTTTGGATGAGGGTGAAGTATTCTTAAAAAGAAA
CTGCCAAAATTGAAAGTGAAATATTCTTAACGTATCCTTACTTTTTTAGA
CTTGACTTTTATACAAACATGAGAAATGATCAATTTCAGAGTTTGTGGCT
TTTGAGTGCACATTTGGAGCAAAAATTATATTTCTGCCTCAAAGTTTTAG
TTTAAGTCTAAAACAAAAGAAAGCAGATTTTTCTGTTAACCAAATACAAA
ATGACTGTATTCTTATCATATTCTGTGAAACTCACCCTAGAGGGTATTCT
TAGGGTATTCTTACGATTTGGCCGATTTTCACCCTGATATTCTTATAGAA
GATATTCTGAAATGAAAAGCGTCTTTTAAGAGGGTTTTCTTTAAATCAAA
ATTTATTTTCTTGCTAAACGAAATCTAATCATTATATGTTTCTTTTGAAG
GTGTTCGTGATCTATCACTGCTTTGCCGGGAGTACCAAATCGATTGGTTG
ACTGAAAAAATCAAAACTTTTATCATCGAAGAAGGGTCAAAGAATACGGC
TGACGAAATCCTTCAATATCTCACGCTTTCAGAAGAAGCGAACTTTGGAC
TTCCATTGTACGAAACTTTGGTGAATCAGTTACATGACTCGTTTCAAACC
ATTCAAGTGTGTCCAAATTTCATGTCTTTCGTACTATGCAAATCGTGATC
GCTCGAAAACGCTTATGGCTCTTACTTGAAAATTTTGGCTCTTTCCTGAA
GAGCCTCTGCCTGAACAGAGTGGCTTATGGCTTCCTCACTATTTTCAAAG
ATCAACCGGTCTTCAACTTTGAATACAATGAGATAGAACAATCTTACTTA
AGGCGATGTCATAAAGATGGAAAATCAAATGAAAATAGTTAA Coding sequence (CDS) from alignment at sc0000497_pilon:14037..17178- >XLOC_045008 ID=XLOC_045008|Name=XLOC_045008|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2986bp|location=Sequence derived from alignment at sc0000497_pilon:14037..17178- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAAAAGAAAATTAAAAACATCAGAACCTGCACGAAAGGTGGTTTC
CAAAATAAATGACGTGAAAACCGCCCCAAATGAGAAGATGAAAGAAAAAT
TGGTTCCGTTTGATTTCGATGACCAAGATTGTGACGTCATCATTGAAGTC
GAAGACAAAGAAGTCTATTTACCTTCCACTTTCTTGAAAATGGCTTCGAA
AGAAAATGTTTTACGGCCGTTTACTGGTGGGAAATTGTACCTTGATGTGT
CTTCAAAAAGTTTGGTTGAAGCATTGTCTTTTTACGTCCCAAAAATAAGC
AAGGGTGATACCGTTGATTATGGTCAAAAGAAAATTAAAAACATCAGAAC
CTGCACGAAAGGTGGTTTCCAAAATAAATGACGTGAAAACCGCCCCAAAT
GAGAAGATGAAAGAAAAATTGGTTCCGTTTGATTTCGATGACCAAGATTG
TGACGTCATCATTGAAGTCGAAGACAAAGAAGTCTATTTACCTTCCACTT
TCTTGAAAATGGCTTCGAAAGAAAATGTTTTACGGCCGTTTACTGGTGGG
AAATTGTACCTTGATGTGTCTTCAAAAAGTTTGGTTGAAGCATTGTCTTT
TTACGTCCCAAAAATAAGCAAGGGTGATACCGTTGATTTTACAAATCTTG
AGGAGGCTGTCAGGGTGGCTAAATTTCTAAATTTAAAAAGACTTCAAGAT
TACATTGAAAAGGTCTGCTTGAGAAAAGCTTTTTACCATCCACGAGTTCT
TGACGAAAAAGGCATTAACGCTTTGAGAATCGCTCAAACCTACGACATGT
TTTTGTTCTTAGAACAACGATGTATTTCTGAAAGTTGGCTGAAACACTTC
GGTCTTATCGCTAATCACGATTTTCTAGTCTTGAGCAACGACATGCGATA
TGAGCTTTTAAAGAACACAGTTATACGTCAATTGGTGACTTATGCCAAAC
ATTTACAAATCTTGAGGAGGCTGTCAGGGTGGCTAAATTTCTAAATTTAA
AAAGACTTCAAGATTACATTGAAAAGGTCTGCTTGAGAAAAGCTTTTTAC
CATCCACGAGTTCTTGACGAAAAAGGCATTAACGCTTTGAGAATCGCTCA
AACCTACGACATGTTTTTGTTCTTAGAACAACGATGTATTTCTGAAAGTT
GGCTGAAACACTTCGGTCTTATCGCTAATCACGATTTTCTAGTCTTGAGC
AACGACATGCGATATGAGCTTTTAAAGAACACAGTTATACGTCAATTGGT
GACTTATGCCAAACATGTTTACGAGAGAAAGTTTTTCCGTGAAACTGTAG
TTGGAATGGAGATTCAAATGATTTTCAACTTTCTTGATTTGGAAGTATAC
GAAAATCGGATGGTTGACCTTGCACCTAAGAAAAACCCTATTTTTATGCC
GAAAAACAATTATTTGACTTCTTTGGAAAAGTTTGTTGATTTGGAGTCGA
TATCATGCAATAAAGAGTCTGCTGATTGCGTCACGCTAGTCGTTGAAGAG
AGAGAAATTCACGTCAATTCTTTCCTCTTAACCAACAATTCTCCTGTTTT
CAAAGCAATGTTGAGCTCAAATTCATTCAAAGAAGGTCAGAGCAAAAGGA
TTGAGTTACCAGGCAAGAATTTCAACCAAATCATTTATCTTCTGCAGCAT
TTATATTCGTCGAAACATATCGGAAATATTCATCGTTTACGAGAGAAAGT
TTTTCCGTGAAACTGTAGTTGGAATGGAGATTCAAATGATTTTCAACTTT
CTTGATTTGGAAGTATACGAAAATCGGATGGTTGACCTTGCACCTAAGAA
AAACCCTATTTTTATGCCGAAAAACAATTATTTGACTTCTTTGGAAAAGT
TTGTTGATTTGGAGTCGATATCATGCAATAAAGAGTCTGCTGATTGCGTC
ACGCTAGTCGTTGAAGAGAGAGAAATTCACGTCAATTCTTTCCTCTTAAC
CAACAATTCTCCTGTTTTCAAAGCAATGTTGAGCTCAAATTCATTCAAAG
AAGGTCAGAGCAAAAGGATTGAGTTACCAGGCAAGAATTTCAACCAAATC
ATTTATCTTCTGCAGCATTTATATTCGTCGAAACATATCGGAAATATTCA
TCGTGTTCGTGATCTATCACTGCTTTGCCGGGAGTACCAAATCGATTGGT
TGACTGAAAAAATCAAAACTTTTATCATCGAAGAAGGGTCAAAGAATACG
GCTGACGAAATCCTTCAATATCTCACGCTTTCAGAAGAAGCGAACTTTGG
ACTTCCATTGTACGAAACTTTGGTGAATCAGTTACATGACTCGTTTCAAA
CCATTCAAGTGTGTCCAAATTTCATGTCTTTCGTACTATGCAAATCGTGA
TCGCTCGAAAACGCTTATGGCTCTTACTTGAAAATTTTGGCTCTTTCCTG
AAGAGCCTCTGCCTGAACAGAGTGGCTTATGGCTTCCTCACTATTTTCAA
AGATCAACCGGTCTTCAACTTTGAATACAATGAGATAGAACAATCTTACT
TAAGGCGATGTCATAAAGATGGAAAATCAAATGAAAATAGTTAAGTGTTC
GTGATCTATCACTGCTTTGCCGGGAGTACCAAATCGATTGGTTGACTGAA
AAAATCAAAACTTTTATCATCGAAGAAGGGTCAAAGAATACGGCTGACGA
AATCCTTCAATATCTCACGCTTTCAGAAGAAGCGAACTTTGGACTTCCAT
TGTACGAAACTTTGGTGAATCAGTTACATGACTCGTTTCAAACCATTCAA
GTGTGTCCAAATTTCATGTCTTTCGTACTATGCAAATCGTGATCGCTCGA
AAACGCTTATGGCTCTTACTTGAAAATTTTGGCTCTTTCCTGAAGAGCCT
CTGCCTGAACAGAGTGGCTTATGGCTTCCTCACTATTTTCAAAGATCAAC
CGGTCTTCAACTTTGAATACAATGAGATAGAACAATCTTACTTAAGGCGA
TGTCATAAAGATGGAAAATCAAATGAAAATAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000497_pilon | genome | sc0000497_pilon:14037..17178 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1285-1497:214 |
| Aaloc | 1282-1284:219 |
| Aaloc | 1054-1275:441 |
| Aaloc | 634-1050:1412 |
| Aaloc | 322-633:2208 |
| Aaloc | 1-318:3143 |
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