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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000497_pilon:28151..34167+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045005 ID=XLOC_045005|Name=XLOC_045005|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6017bp|location=Sequence derived from alignment at sc0000497_pilon:28151..34167+ (Clytia hemisphaerica_ch_hm2_pilon)
acaacaacaacaaccaacaaAATGAAGATTTGGAAAGCTTTGTTACTCGT
CTCCTTCTTGGTCTACGCAGTTCACTGTAAGTTCAATTATGCTCAACACC
TTTTCTTATTCATAAGAGTCTTTTACCCTTTAACTCGTACAATAtgagat
aatttttttctcgttcAAAGTTTTCTATATATGTAAGTTCAATTATGCTC
AACAACTTTTCTTATTCATAAGAGTCTTTTACCCTTTAACTCGTACAATA
ttggataatttttttctcgttcAAAGTTTTCTATATATGTAAGTTCAATT
ATGCTCAACATCTTTTTTCGTGAGTCTTTTACCCTTTAACTCGTACAATA
ttggataatttttttctcgttcAAAGTTTTCTATATATGTAAGTTCAATT
ATGCTCAACATCTTTTTCGTGAGTCTTTTACCCTTTAACTCGTACAATAt
tggataatttttttctcgttcAAAGTTTTCTATATATGTAAGTTCAATTA
TGCTCAACACTTTTTCTTAGTCTTTTTACCCTTTAACTCGTAttggataa
tttttttctcgttcAAAGTTTTCTATATATGTAAGTTCAATTATGCTCAA
CAACTTTTCTTATTCATAAGAGTCTTTTACCCTTTAACTCGTACAATAtt
ggataatttttttctcgttcAAAGTTTTCTATATATGTAAGTTCAATTAT
GCTCAACATCTTTTTTCGTGAGTCTTTTACCCTTTAACTCGTACAATAtg
agataatttttttctcgttcAAAGTTTTCTATATATGTAAGTTCAATTAT
GCTCAACAACTTTTCTTATTCATAAGAGTCTTTTACCCTTTAACTCGTAC
AATAttggataatttttttctcgttcAAAGTTTTCTATATATGTAAGTTC
AATTATGCTCAACAACTTTTCTTATTCATAAGAGTCTTTTACCCTTTAAC
TCGTACAATAttggataatttttttctcgttcAAAGTTTTCTATATATGT
AAGTTCAATTATGCTCAACAACTTTTCTTATTCATAAGAGTCTTTTACCC
TTTAACTCGTACAATAttggataatttttttctcgttcAAAGTTTTCTAT
ATATGTAAGTTCAATTATGCTCAACATCTTTTTTCGTGAGTCTTTTACCC
TTTAACTCGTACAATAtgagataatttttttctcgttcAAAGTTTTCTAT
ATATTAAGTTCATCATTTCCCTTTAACTCGTACAATGTATTTTTCTCAAC
ATTCAACATTTTTCGTGAGTCTTTTACCCTTTTACTGTACAATAttggat
aatttttttctcgttcAAAGTTTTCTATATATGTAAGTTCAATTATGCTC
AACAACTTTTCTTATTCATAAGAGTCTTTTACCCTTTAACTCGTACAATA
ttggataatttttttctcgttcAAAGTTTTCTATATATGTAAGTTCAATT
ATGCTCAACAACTTTTCTTATTCATGAGTCTTTAAGTTTGGGAGTGTTGT
AGACCTTTTCATCATGAGCTTTTATTGAACTTTTTAACAGAAAGAAGTTA
AAAGATAGCAAGAAATAAACGatcgaaaattttctttatattctAGGCGA
AGAAGAGGAGACAAAAGCCTTGGATGAAGTCGAACAAGAAGACGCTCCAG
AAACCTCCCCACAACAagaagaagacgagccaatgaccagtgacgaagaa
acgaatgacgaagaaatgaacgacgaagaagagagtgacgaagagggaga
ggagactcgagaagaagaagagcaggatgaaccacaagaacaagcagacg
aagaagaacaagatgaagaaAATGTCGAACAACAAAGTGGTACGTATTCA
ACAGAAATGCTAAATGTGAAATTCTCTCTCGAAAGAAGCGTTGCAATCAC
GGATGAATATCTAGAATCTAAGAATATAAAAATCAACCTAAAGACATTGT
TAATTATGAGAAAATTCATTCCATAGGAGATGACATCTTCCACAATCTTT
CCTTGTTAtaactttgttttctttttttcagatgCTTACAGACCAAAAGT
GAGAATCACCAAAGTGTTCAAAGGAAAAGGACTcttcaaaaacaagaaag
ttaGCTGTGGAAGCTCCCTTGCTAACCTCGGATGTAAATCATCAAAGAAA
TGCATCAGAAGAAAGAGATACTACAAAAGACGAGTTTGCGTCAGATCTCT
CATCACAACAGTTTGCCGACAACGTATCACCGCAACATGCAAAGTATGCA
GCCGATTCCGACTCCGAAAATGTTATCTCTTCGGAAAGAAATACATCAGA
TGCCGAACATCCAAGAGAGTCTACACCAAATGCAGAAAAACCTCCAGCTC
GAAAATCCAAACCAAGACGACTCGCAAAGTCGTCAACCACCCATACAAGA
AATACTAAATATCAAACGCATGCTGGACACGCTTTTAGAAAAGAGCGCCA
TCTTTGAGGGgtgattttcattttatcaattaggcttttttatgaaactt
tctctgtaaatcttttttctaaataaaCAGTGCAAATCAAATAAACTGCT
GATTCTCTTTGTAATACTAATAAGCATTTAACTCAAACCATCCAAAGTTC
TGGTGAGGCAATATAGTTTAACTCTCTCACACCCTCGTAATAGAATGTAG
TGAGCTACTTTCCACACCTAGACCAAGAATCTGACATCAGATAAGGTAGA
GCTttgaaagatttccaaaatctAACCATCTACGAaaccataatttttta
taaatctattctcaaaacaaaagaattaaaactgAATTTGATAAGTAAGT
AATCATTAATTATTATACAAAACAGGTTACCGCAAATTAGGGATAACTCT
CATAtaggaattttatacacgattatCATCCCTTATATCAAGGAATACCA
GAGGGGATGCGGGCAGCCACAACCTACTAACGTCCACGAACAATCTCTTG
GGTTTTCTTAAGTCACAAATGAACGGACAGACAACAGTGACAAAACTTTC
ACCCTGCTATACTGAAGTATAACTGcaactgttcttataagaaaaaataa
atcacgatgaaaagtttcaaaagccTTCGTTAAGGGTTCTTTAGCACTTT
GGACACGTTTCTTTTTTGATCAACTCGACTTTAGAGTTCAATGGCAAATT
GACTTCATGAATAGGCGAgaatataataaaatattaatttcCACGAATGA
ACCGAAAGCAATTCATTCCGGACGTATTGTTGCCAAAGGTTCAAAGGAAT
AACCCCTTGCTGATAAAATGAATATTGATTATTGTATTTGGTAGATACGG
ATTTTATCTAAGTCACTTTTGTTCGCCGAAACTAAGACCTTTAAAGAGGC
CTTTTGGAAAAGAGTTATTTTCCTCTTGGACATCACTTAAACGCTGAATA
CAAATGCCATAAACCTGattgcaggggggggggtctgtaCTAAAACACAG
ACAAGTCGATTTTAGCGACGTGAAGATATactcaaaacttaaaaatcatt
ttaatatCACAAGAAGGTGCTAAAAAGAGTACATTGGTACTAATTTTAGT
Gactttatcattttttaatcttttttcagaatttattctaattgttcgaa
aagaatttaaaatttattcatcaaaaaatttcccaagttcaattattatt
gaaaattaagCCCAAGCTTGAGAAAACCGAAATAGGGTTGTCtctgtgta
ctaaaataccccTTCCCGAAACTACCATTCTCTAAACTACCCTTTTAATA
ACCCCAAAAGACTGTTATTGAACTTGAAATTATAAAAAGCTAGAAAAAGG
tcaccttttcaaaaaaaaagtttgatgaaattCCATACGGTAAAGTAGCA
ATAGTAGGAAATAAATAAAGAACTTAAACCGTTCAAAACTGCTAAAGGGT
AACTCGTTTTGCTGAAAACGCATGCATAACTTTGATGAGTGCAAATAAAT
AGCTGTCTCGTTATAAACCAATAAATTCTAGCAACGCTGTAAAAAATTGC
AAGTCATCCTGGAAAAAGAATTCTCAATATCAACTTCATTTTAATAAggg
aaaatttggaaaacaaAAACACATCTAGAAAGTATGTCAAGCCCTGGGAC
ATTTTGGTCTaagttttcccaaaaaattattatttgaaattcgggcttca
tcagattttaaatattaccattttacatcaaagtgcaaaagagaaatgct
ctttttccctaaaaatgacataagggaatttccccgaataagaaaatccg
atttttacgtccaaaaaatttttttcgaaataaactgcttcagccacttt
ttagaaagCCTTGCTCTCCATCTTTAtgcataaaatcagaaaaaactaat
aaagcaatttctcagaaagttaaaaaaaaacatttttagtcactttttgg
cctaaacttgtcaaacatatttttctcaaaagtcgggctccgtcactttt
tgggaatcaccattttgcatctgcataaaatcagaaaaaactaatgaacc
aatcctgagaaaaggtggcaacagacgaacggacggacgaacggacggac
gaacggacgaacatcgGTTAATCtaaaggacctccacccaccggggtagg
tccaaaaattgttaATTAAGAATACTTCATTTCGCTTTCTATGTgtgttt
catttaaaaaaaaaagagcaTCTCAAAATGTGTGAGCAATAATTATCGCC
CTGATAACGAGATCTAAGAAATATTGTGGCTCAATTGAGAAAGAAGGTTT
GCGAAAAGTATTAGAAAAGTCACGAACAAGCCAATTTGAAGAAAGCAGAA
AAAGCTGAACGTATCAAGTTTGATTGATTAGTAATATGTAAAACCAATGT
CATCAAATTCGCGTTTAATAAAAATACTGCATGTGAAGCAATTAATTAAA
ACCGAAACGACCATAATTAATACCCAAAGAGGTGTGGCTGAAAGTTTCGG
AGTAATTATCTTCATCTCTCACTTCCTGGTCTGCAACAGTATAAAGGAAC
TGCAACATTTGGAAAAAAGACATTCTCAAATTGAACTCGAGgataaaaca
acaacaacaaccaacaaAATGAAGATTTGGAAAGCTTTGTTACTCGTCTC
CTTCTTGGTCTACGCAGTTCACTGTAAGTTCAATTATGCTCAACATCTTT
TCTTATTCATAAGagtcttttaatttttattcttttgctGGACTTCAGAA
CAGAAAGAAGCAAAAAGATTGCAAGAAATAAACGATCCacctttttcttt
taattttaggCGAAGAAGAGGAGACAAAAGCCTTGGATGAAGTCGAACAA
GAAGACGCTCCAGAAGCCTCCCCACAACAAGAAGACGACGAGCCAATGAC
CAGTGACGAAGAAACGAATGACGACGAACAAACGAATGACGAAGAGGGAG
AGGAGACTCATgaagaagaagagcaggatgaaccacaagaacaagaagac
gaagaagaacaagatgaagaaaatgtcgaagaacaaagTGGTACGTATTC
AACAGAAATACTAAATGTGAAATTCTCTCTCGAAAGAAGCGTTGCAATCA
CGGATGAATATCTAGAATCTAAGAATCTAAAAATCAAGCTAAAGACATTG
TTTCTTTGATCAATTATGAGAAAATTGATTCCAAAGGAGATGACATCATT
CACAATCTTTCCTTCCtataactttttcttctttttttcagatgCTTACA
GACCAAAAGTGAGAATCACTAAAGTGTTCAAAGGAAAAGGACTcttcaaa
aacaagaaagttaGCTGTGGAAGCTCCCTTGCTAACCTCGGATGTAAATC
ATCAAAGAAATGCATCAGAAGAAAGAGATACTACAAAAAACGAGTTTGCG
TCAGATCTCTCATCACCACAGTTTGCCGACAACGTATCACCGTAACATGC
AAAGTATGCAGTCGATTCCGCCTCCGAAAATGTTATCTCTTCGGAAAGAA
ATACCTCAGATGCCGAACATCCAAGAGAGTCTACACCAAATGCAGAAAAA
CCTCCAGCTCGAAAATC Coding sequence (CDS) from alignment at sc0000497_pilon:28151..34167+ >XLOC_045005 ID=XLOC_045005|Name=XLOC_045005|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1290bp|location=Sequence derived from alignment at sc0000497_pilon:28151..34167+ (Clytia hemisphaerica_ch_hm2_pilon)
acaacaacaacaaccaacaaAATGAAGATTTGGAAAGCTTTGTTACTCGT
CTCCTTCTTGGTCTACGCAGTTCACTacaacaacaacaaccaacaaAATG
AAGATTTGGAAAGCTTTGTTACTCGTCTCCTTCTTGGTCTACGCAGTTCA
CTGCGAAGAAGAGGAGACAAAAGCCTTGGATGAAGTCGAACAAGAAGACG
CTCCAGAAACCTCCCCACAACAagaagaagacgagccaatgaccagtgac
gaagaaacgaatgacgaagaaatgaacgacgaagaagagagtgacgaaga
gggagaggagactcgagaagaagaagagcaggatgaaccacaagaacaag
cagacgaagaagaacaagatgaagaaAATGTCGAACAACAAAGTGGCGAA
GAAGAGGAGACAAAAGCCTTGGATGAAGTCGAACAAGAAGACGCTCCAGA
AACCTCCCCACAACAagaagaagacgagccaatgaccagtgacgaagaaa
cgaatgacgaagaaatgaacgacgaagaagagagtgacgaagagggagag
gagactcgagaagaagaagagcaggatgaaccacaagaacaagcagacga
agaagaacaagatgaagaaAATGTCGAACAACAAAGTGatgCTTACAGAC
CAAAAGTGAGAATCACTAAAGTGTTCAAAGGAAAAGGACTcttcaaaaac
aagaaagttaGCTGTGGAAGCTCCCTTGCTAACCTCGGATGTAAATCATC
AAAGAAATGCATCAGAAGAAAGAGATACTACAAAAAACGAGTTTGCGTCA
GATCTCTCATCACCACAGTTTGCCGACAACGTATCACCGTAACATGCAAA
GTATGCAGTCGATTCCGCCTCCGAAAATGTTATCTCTTCGGAAAGAAATA
CCTCAGATGCCGAACATCCAAGAGAGTCTACACCAAATGCAGAAAAACCT
CCAGCTCGAAAATCatgCTTACAGACCAAAAGTGAGAATCACTAAAGTGT
TCAAAGGAAAAGGACTcttcaaaaacaagaaagttaGCTGTGGAAGCTCC
CTTGCTAACCTCGGATGTAAATCATCAAAGAAATGCATCAGAAGAAAGAG
ATACTACAAAAAACGAGTTTGCGTCAGATCTCTCATCACCACAGTTTGCC
GACAACGTATCACCGTAACATGCAAAGTATGCAGTCGATTCCGCCTCCGA
AAATGTTATCTCTTCGGAAAGAAATACCTCAGATGCCGAACATCCAAGAG
AGTCTACACCAAATGCAGAAAAACCTCCAGCTCGAAAATC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000497_pilon | genome | sc0000497_pilon:28151..34167 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 325-648:5694 |
| Aaloc | 154-321:1671 |
| Aaloc | 85-153:1599 |
| Aaloc | 7-81:1 |
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