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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000278_pilon:422543..424692- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044982 ID=XLOC_044982|Name=XLOC_044982|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2150bp|location=Sequence derived from alignment at sc0000278_pilon:422543..424692- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACAAAGAGCTACAAACGCAACAAGCAAAATGGAGCAAGAAGCTTT
ACTACCCCCGTCTGCTATCGATGAAAGCTTCCCATCAGATAGTGAATTCT
CAACAACTGGCTCCGTATCGGGCGCCACTGATAAGGCCAAGAAACGAGGT
GCCGAGAATATTTTTCAAGCAATCAATCTCTTGTTAAGAAGAAACACTGG
AGAAGATGGAAGCCTTGCAATTAGCACCGCTTTTTTAATTATGGTTTCAA
TGTCGTATGGGTCAGCAGTGATTATTTTACCGTACACGCTACAGCAATTA
GGTCCATTGCTTTGGTTGCTTTTCACCGTGGGTTGTTTCCTTATTCTGGC
TTTTTGCGCGGTGATGTTGAAGGAATCATGTGTTCACATTATGTTGTTTG
GTAAAGATCGCATCTCACGATCACTTCTCGTGCGCCGACCGTACCCGACA
ATTGCCGAATATTCAGTCGGGAAACGATTCTCAAAAGTCGTTGAAGCGAC
TATGTATGTCGCACTGGGAGCTGAAGTGTTAGCTTATGGTTTACTTGGGG
CAACTTCTATGAACAGAGTGATTCCATTATGGCTTGAAGGGGATGATAGA
ATCAGAATTTGGCTTTTGATCGGATTTTTTGTTATGCTTCCATTCATGAT
GGTTGGAACGTATTCTGATTTAACAATGCCGGCTTTCGTTGCTGTATTTA
CGTCGTTTCTGGCTTCACTGTGTATCTTTATCGTATCGGTAGTGGCAAAA
TATTACTATGGTGCACGAACATCAAGCTATAAGACAATAACATTAGTCAA
AGAGGAACATATTTTTAAGATTTTTGGTGAGATTTTGTTCGCAGCTGCCG
GTCCTGCCCTCTTGTTACCTAATATTGTTGTCCTATTAAAGAAACCGGAG
AAGTTTCAAACGCCCATCTTGTTCAGTCATCTATGTGTCGTTCTTTTATA
CGCCCTACTGGCAATTGTACCATTCATCATTTTCGGACAAACGGTTGAAG
CAAGCATAATAGATACTTTACAAGATGCTATCTTAGCTTTGAAAATGAGT
CCGGTCTGGCTTTCTGTCATTACCCTTGCTTCGATTTCATTGGCTATCCA
TTTTACAATGGTGACAGTGCTTTGTGCCAATCCAATTTTTCTTAATTTGG
AGAATAAATTCAACATACCGCCAGGTAAAGTTTTTTTGTTTTGAGAGAAG
ATTTCTTCCACCATTTTCATTTCCAAAATGACTTCCAATCTTCCAATGTA
GTATACGAATTTCAAATCTTAATATCAACAAGGCCAAGCCAATTGAACCA
GCGAAAATTGCCAAAATTGACCCATCAAAGAATCAAATCTCATCCATCTC
AGTTGGACTTAAGAGACTGAAAATCGGAGTTGAAAACCTTCCATCAGGAC
AAGATTCAGTTCGCAAACATCGGAAGAATTAATATTTATCCATTGAAAAT
TTGTCCACTTAAATTATAAAAGTGTCCTCTCTATCTCTTTTAGGGAATGG
TCAGAAAGTATCTACTAGGTGGCGTGGAGCATATTTTCAAAAAATTCCAA
AAAAAATTCCCATTTGATACCATCAAAAAATTTGAGGCAATTTATTTTTG
GCACCTCCCTCCGAATATAAAACCCCTCCCTAAAGACATGAAATTTTTTT
GAGACAGCCCCTAAGCTGGGAAAAGTTTTTGACACCCCTCGAATCCACCC
CTCCCCTAGTAGATACTTTCTGACCATTCCCTTACCATAAGGAATTTTAA
TCAAAATTCTTTCATTGTTTTTATAGAGTTTACATGGAAAAGGTTTGCAC
TTCGCTCATCAATCGCTTTAGCATTTGTATTGGTTGATATCATGATCCCT
TACTTCTCACCTGTCATCTCTATCGTCGGCGCACTACCGCTCGCTCTGCT
TTGTATTATCTATCCTATCATTGTTTACTTTCATACGTTCGAAAAGAAAT
CGAATTACATGAAACTTTTCCTTGGATTTGTTTTATGTTTAACTTTCGCA
TTGATGATTGGGAACACGATATTCAGTATTTGGGATATTGTTGTTTATTT
TGAATTGCCATCATTTAAAGCTGTCAAACATTTTGGAAATCAAACTGTCA
AAGACACGTGGCGAAAAGCTGCCCTGAGGAAAAACTTTACCTTCACTCAG
Coding sequence (CDS) from alignment at sc0000278_pilon:422543..424692- >XLOC_044982 ID=XLOC_044982|Name=XLOC_044982|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3096bp|location=Sequence derived from alignment at sc0000278_pilon:422543..424692- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACAAAGAGCTACAAACGCAACAAGCAAAATGGAGCAAGAAGCTTT
ACTACCCCCGTCTGCTATCGATGAAAGCTTCCCATCAGATAGTGAATTCT
CAACAACTGGCTCCGTATCGGGCGCCACTGATAAGGCCAAGAAACGAGGT
GCCGAGAATATTTTTCAAGCAATCAATCTCTTGTTAAGAAGAAACACTGG
AGAAGATGGAAGCCTTGCAATTAGCACCGCTTTTTTAATTATGGTTTCAA
TGTCGTATGGGTCAGCAGTGATTATTTTACCGTACACGCTACAGCAATTA
GGTCCATTGCTTTGGTTGCTTTTCACCGTGGGTTGTTTCCTTATTCTGGC
TTTTTGCGCGGTGATGTTGAAGGAATCATGTGTTCACATTATGTTGTTTG
GTAAAGATCGCATCTCACGATCACTTCTCGTGCGCCGACCGTACCCGACA
ATTGCCGAATATTCAGTCGGGAAACGATTCTCAAAAGTCGTTGAAGCGAC
TATGTATGTCGCACTGGGAGCTGAAGTGTTAGCTTATGGTTTACTTGGGG
CAACTTCTATGAACAGAGTGATTCCATTATGGCTTGAAGGGGATGATAGA
ATCAGAATTTGGCTTTTGATCGGATTTTTTGTTATGCTTCCATTCATGAT
GGTTGGAACGTATTCTGATTTAACAATGCCGGCTTTCGTTGCTGTATTTA
CGTCGTTTCTGGCTTCACTGTGTATCTTTATCGTATCGGTAGTGGCAAAA
TATTACTATGGTGCACGAACATCAAGCTATAAGACAATAACATTAGTCAA
AGAGGAACATATTTTTAAGATTTTTGGTGAGATTTTGTTCGCAGCTGCCG
GTCCTGCCCTCTTGTTACCTAATATTGTTGTCCTATTAAAGAAACCGGAG
AAGTTTCAAACGCCCATCTTGTTCAGTCATCTATGTGTCGTTCTTTTATA
CGCCCTACTGGCAATTGTACCATTCATCATTTTCGGACAAACGGTTGAAG
CAAGCATAATAGATACTTTACAAGATGCTATCTTAGCTTTGAAAATGAGT
CCGGTCTGGCTTTCTGTCATTACCCTTGCTTCGATTTCATTGGCTATCCA
TTTTACAATGGTGACAGTGCTTTGTGCCAATCCAATTTTTCTTAATTTGG
AGAATAAATTCAACATACCGCCAGATGAAACAAAGAGCTACAAACGCAAC
AAGCAAAATGGAGCAAGAAGCTTTACTACCCCCGTCTGCTATCGATGAAA
GCTTCCCATCAGATAGTGAATTCTCAACAACTGGCTCCGTATCGGGCGCC
ACTGATAAGGCCAAGAAACGAGGTGCCGAGAATATTTTTCAAGCAATCAA
TCTCTTGTTAAGAAGAAACACTGGAGAAGATGGAAGCCTTGCAATTAGCA
CCGCTTTTTTAATTATGGTTTCAATGTCGTATGGGTCAGCAGTGATTATT
TTACCGTACACGCTACAGCAATTAGGTCCATTGCTTTGGTTGCTTTTCAC
CGTGGGTTGTTTCCTTATTCTGGCTTTTTGCGCGGTGATGTTGAAGGAAT
CATGTGTTCACATTATGTTGTTTGGTAAAGATCGCATCTCACGATCACTT
CTCGTGCGCCGACCGTACCCGACAATTGCCGAATATTCAGTCGGGAAACG
ATTCTCAAAAGTCGTTGAAGCGACTATGTATGTCGCACTGGGAGCTGAAG
TGTTAGCTTATGGTTTACTTGGGGCAACTTCTATGAACAGAGTGATTCCA
TTATGGCTTGAAGGGGATGATAGAATCAGAATTTGGCTTTTGATCGGATT
TTTTGTTATGCTTCCATTCATGATGGTTGGAACGTATTCTGATTTAACAA
TGCCGGCTTTCGTTGCTGTATTTACGTCGTTTCTGGCTTCACTGTGTATC
TTTATCGTATCGGTAGTGGCAAAATATTACTATGGTGCACGAACATCAAG
CTATAAGACAATAACATTAGTCAAAGAGGAACATATTTTTAAGATTTTTG
GTGAGATTTTGTTCGCAGCTGCCGGTCCTGCCCTCTTGTTACCTAATATT
GTTGTCCTATTAAAGAAACCGGAGAAGTTTCAAACGCCCATCTTGTTCAG
TCATCTATGTGTCGTTCTTTTATACGCCCTACTGGCAATTGTACCATTCA
TCATTTTCGGACAAACGGTTGAAGCAAGCATAATAGATACTTTACAAGAT
GCTATCTTAGCTTTGAAAATGAGTCCGGTCTGGCTTTCTGTCATTACCCT
TGCTTCGATTTCATTGGCTATCCATTTTACAATGGTGACAGTGCTTTGTG
CCAATCCAATTTTTCTTAATTTGGAGAATAAATTCAACATACCGCCAGAG
TTTACATGGAAAAGGTTTGCACTTCGCTCATCAATCGCTTTAGCATTTGT
ATTGGTTGATATCATGATCCCTTACTTCTCACCTGTCATCTCTATCGTCG
GCGCACTACCGCTCGCTCTGCTTTGTATTATCTATCCTATCATTGTTTAC
TTTCATACGTTCGAAAAGAAATCGAATTACATGAAACTTTTCCTTGGATT
TGTTTTATGTTTAACTTTCGCATTGATGATTGGGAACACGATATTCAGTA
TTTGGGATATTGTTGTTTATTTTGAATTGCCATCATTTAAAGCTGTCAAA
CATTTTGGAAATCAAACTGTCAAAGACACGTGGCGAAAAGCTGCCCTGAG
GAAAAACTTTACCTTCACTCAGAGTTTACATGGAAAAGGTTTGCACTTCG
CTCATCAATCGCTTTAGCATTTGTATTGGTTGATATCATGATCCCTTACT
TCTCACCTGTCATCTCTATCGTCGGCGCACTACCGCTCGCTCTGCTTTGT
ATTATCTATCCTATCATTGTTTACTTTCATACGTTCGAAAAGAAATCGAA
TTACATGAAACTTTTCCTTGGATTTGTTTTATGTTTAACTTTCGCATTGA
TGATTGGGAACACGATATTCAGTATTTGGGATATTGTTGTTTATTTTGAA
TTGCCATCATTTAAAGCTGTCAAACATTTTGGAAATCAAACTGTCAAAGA
CACGTGGCGAAAAGCTGCCCTGAGGAAAAACTTTACCTTCACTCAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000278_pilon | genome | sc0000278_pilon:422543..424692 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1177-1548:373 |
| Aaloc | 1-1173:2151 |
|
