XLOC_044980 (mRNA) -

Overview
NameXLOC_044980
Unique NameXLOC_044980
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000278_pilon:469308..470126-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044980 ID=XLOC_044980|Name=XLOC_044980|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=819bp|location=Sequence derived from alignment at sc0000278_pilon:469308..470126- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAATTTATATTTAAACGAAATCAGTTTTATTGGGAAAGGTAAGAA TTTTTTTTCTGTTGAAAACAAACTTTTTTAAACGATACTCTATTCTAAAA CCATCTTGAGATTTTTAGAAATATAATGTTTAAATTTTTTTATATTAATT TTTTCAAATTTTCAAGGTATTGGCAAATTAAAACAACTCCAAAGTTTGAA TTTGAGCAGCAACAAAGTCAACTATCTACCAATAGAGCTGTTTGGGTGTG AAAGTCTCATTAACTTGCACTTGGACAGTAACAAACTCAATTATATACCA CAGCAAATAACCAAACTTAAAGAACTGAAGGAATTATCAATATGCTGTAA CAATCTCCCCTTTCTTAATCTCAACATTGGTTCAATGAAAAATTTGAAAA GTGTAGCATTTTTTCAGAATAAAAAATTATGGTATATTGATTTAAACTCT ATTCTCCCAAAATGTGGGCATTACACTACACGTCTTCAAAAGACACTAAC CTTTGAAGAACAATCAGAAGCTCTTGGGAAGATCCGACGCTATTATAATT TACATTTAACTGCGAACAACAATATTAAAGTTCCTGTTCCTCCTTTATTG GAAATCGTTTTAAGACAAATGAGAAAAGACTTTTTGTATTCGAAAGATAT GGAGAAAAAAATACCAAAAGATATATTTACCAATTTGGATTGTCCTCCAG GTTTTTGTTGTTATTGTGAACAACCTGTCTTCACTTGGGCTATCTTCAGC ACAAGAGGTGGCTATTTAAATATATTCTGCTCTGTTATGTGTTTGGAAAC TTTTTATAATCGATGGTAA

Coding sequence (CDS) from alignment at sc0000278_pilon:469308..470126-

>XLOC_044980 ID=XLOC_044980|Name=XLOC_044980|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1392bp|location=Sequence derived from alignment at sc0000278_pilon:469308..470126- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAATTTATATTTAAACGAAATCAGTTTTATTGGGAAAGATGTTGA
ATTTATATTTAAACGAAATCAGTTTTATTGGGAAAGGTATTGGCAAATTA
AAACAACTCCAAAGTTTGAATTTGAGCAGCAACAAAGTCAACTATCTACC
AATAGAGCTGTTTGGGTGTGAAAGTCTCATTAACTTGCACTTGGACAGTA
ACAAACTCAATTATATACCACAGCAAATAACCAAACTTAAAGAACTGAAG
GAATTATCAATATGCTGTAACAATCTCCCCTTTCTTAATCTCAACATTGG
TTCAATGAAAAATTTGAAAAGTGTAGCATTTTTTCAGAATAAAAAATTAT
GGTATATTGATTTAAACTCTATTCTCCCAAAATGTGGGCATTACACTACA
CGTCTTCAAAAGACACTAACCTTTGAAGAACAATCAGAAGCTCTTGGGAA
GATCCGACGCTATTATAATTTACATTTAACTGCGAACAACAATATTAAAG
TTCCTGTTCCTCCTTTATTGGAAATCGTTTTAAGACAAATGAGAAAAGAC
TTTTTGTATTCGAAAGATATGGAGAAAAAAATACCAAAAGATATATTTAC
CAATTTGGATTGTCCTCCAGGTTTTTGTTGTTATTGTGAACAACCTGTCT
TCACTTGGGCTATCTTCAGCACAAGAGGTGGCTATTTAAATATATTCTGC
TCTGTTATGTGTTTGGAAACTTTTTATAATCGATGGTAAGTATTGGCAAA
TTAAAACAACTCCAAAGTTTGAATTTGAGCAGCAACAAAGTCAACTATCT
ACCAATAGAGCTGTTTGGGTGTGAAAGTCTCATTAACTTGCACTTGGACA
GTAACAAACTCAATTATATACCACAGCAAATAACCAAACTTAAAGAACTG
AAGGAATTATCAATATGCTGTAACAATCTCCCCTTTCTTAATCTCAACAT
TGGTTCAATGAAAAATTTGAAAAGTGTAGCATTTTTTCAGAATAAAAAAT
TATGGTATATTGATTTAAACTCTATTCTCCCAAAATGTGGGCATTACACT
ACACGTCTTCAAAAGACACTAACCTTTGAAGAACAATCAGAAGCTCTTGG
GAAGATCCGACGCTATTATAATTTACATTTAACTGCGAACAACAATATTA
AAGTTCCTGTTCCTCCTTTATTGGAAATCGTTTTAAGACAAATGAGAAAA
GACTTTTTGTATTCGAAAGATATGGAGAAAAAAATACCAAAAGATATATT
TACCAATTTGGATTGTCCTCCAGGTTTTTGTTGTTATTGTGAACAACCTG
TCTTCACTTGGGCTATCTTCAGCACAAGAGGTGGCTATTTAAATATATTC
TGCTCTGTTATGTGTTTGGAAACTTTTTATAATCGATGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044980XLOC_044980-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000278_pilongenomesc0000278_pilon:469308..470126 -
Properties
Property NameValue
Aaloc46-696:652
Aaloc1-42:820